[INFO] cloning repository https://github.com/Helkafen/vcf_pwm [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Helkafen/vcf_pwm" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8e5d5ed6ad5a45aeb3484eede816ff02f40acf3b [INFO] testing Helkafen/vcf_pwm against beta-2021-09-08 for beta-1.56-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm" "/workspace/builds/worker-0/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Helkafen/vcf_pwm on toolchain beta-2021-09-08 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] finished tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] tweaked toml for git repo https://github.com/Helkafen/vcf_pwm written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate git repo https://github.com/Helkafen/vcf_pwm already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-09-08" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded snafu-derive v0.5.0 [INFO] [stderr] Downloaded syn v0.15.39 [INFO] [stderr] Downloaded miniz-sys v0.1.12 [INFO] [stderr] Downloaded miniz_oxide v0.2.2 [INFO] [stderr] Downloaded doc-comment v0.3.1 [INFO] [stderr] Downloaded csv-core v0.1.6 [INFO] [stderr] Downloaded walkdir v2.2.8 [INFO] [stderr] Downloaded rand_xoshiro v0.1.0 [INFO] [stderr] Downloaded cast v0.2.2 [INFO] [stderr] Downloaded criterion-plot v0.3.1 [INFO] [stderr] Downloaded ndarray v0.12.1 [INFO] [stderr] Downloaded multimap v0.4.0 [INFO] [stderr] Downloaded bit-vec v0.5.1 [INFO] [stderr] Downloaded bit-set v0.5.1 [INFO] [stderr] Downloaded bv v0.10.0 [INFO] [stderr] Downloaded miniz_oxide_c_api v0.2.2 [INFO] [stderr] Downloaded smallvec v0.3.4 [INFO] [stderr] Downloaded flate2 v1.0.9 [INFO] [stderr] Downloaded bstr v0.2.1 [INFO] [stderr] Downloaded csv v1.1.1 [INFO] [stderr] Downloaded statrs v0.9.0 [INFO] [stderr] Downloaded backtrace-sys v0.1.30 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded tinytemplate v1.0.2 [INFO] [stderr] Downloaded rayon-core v1.6.0 [INFO] [stderr] Downloaded crossbeam v0.2.12 [INFO] [stderr] Downloaded itertools v0.8.0 [INFO] [stderr] Downloaded backtrace v0.3.32 [INFO] [stderr] Downloaded subprocess v0.1.18 [INFO] [stderr] Downloaded bindgen v0.51.1 [INFO] [stderr] Downloaded serde_derive v1.0.94 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded parking_lot v0.3.8 [INFO] [stderr] Downloaded ordermap v0.3.5 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded bytecount v0.3.2 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded strum v0.13.0 [INFO] [stderr] Downloaded rayon v1.2.0 [INFO] [stderr] Downloaded lzma-sys v0.1.14 [INFO] [stderr] Downloaded strum_macros v0.13.0 [INFO] [stderr] Downloaded owning_ref v0.2.4 [INFO] [stderr] Downloaded multiqueue v0.3.2 [INFO] [stderr] Downloaded criterion v0.2.11 [INFO] [stderr] Downloaded which v3.1.0 [INFO] [stderr] Downloaded serde v1.0.94 [INFO] [stderr] Downloaded snafu v0.5.0 [INFO] [stderr] Downloaded fs-utils v1.1.1 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded regex-automata v0.1.7 [INFO] [stderr] Downloaded bio v0.28.2 [INFO] [stderr] Downloaded rust-htslib v0.26.1 [INFO] [stderr] Downloaded bgzip v0.0.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 8be4b5dfb3f39c23013de4a58826607342479a6600179d84bde472e0f7432922 [INFO] running `Command { std: "docker" "start" "-a" "8be4b5dfb3f39c23013de4a58826607342479a6600179d84bde472e0f7432922", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8be4b5dfb3f39c23013de4a58826607342479a6600179d84bde472e0f7432922", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8be4b5dfb3f39c23013de4a58826607342479a6600179d84bde472e0f7432922", kill_on_drop: false }` [INFO] [stdout] 8be4b5dfb3f39c23013de4a58826607342479a6600179d84bde472e0f7432922 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c43b5c38f368ed348887aabe6e310d260de09b202b4e84bfd3c5befd797cb9b9 [INFO] running `Command { std: "docker" "start" "-a" "c43b5c38f368ed348887aabe6e310d260de09b202b4e84bfd3c5befd797cb9b9", kill_on_drop: false }` [INFO] [stderr] Compiling syn v0.15.39 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling serde v1.0.94 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling rustc-demangle v0.1.15 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling unicode-segmentation v1.3.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling owning_ref v0.2.4 [INFO] [stderr] Compiling bio v0.28.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling crossbeam v0.2.12 [INFO] [stderr] Compiling strum v0.13.0 [INFO] [stderr] Compiling smallvec v0.3.4 [INFO] [stderr] Compiling backtrace-sys v0.1.30 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling which v3.1.0 [INFO] [stderr] Compiling thread-id v3.3.0 [INFO] [stderr] Compiling subprocess v0.1.18 [INFO] [stderr] Compiling rustc-hash v1.0.1 [INFO] [stderr] Compiling regex-automata v0.1.7 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling parking_lot_core v0.2.14 [INFO] [stderr] Compiling flate2 v1.0.9 [INFO] [stderr] Compiling backtrace v0.3.32 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling parking_lot v0.3.8 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling bgzip v0.0.3 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling multiqueue v0.3.2 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling serde_derive v1.0.94 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling strum_macros v0.13.0 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling bstr v0.2.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling rust-htslib v0.26.1 [INFO] [stderr] Compiling find-tfbs v1.0.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: variant is never constructed: `OtherPattern` [INFO] [stdout] --> src/types.rs:89:6 [INFO] [stdout] | [INFO] [stdout] 89 | OtherPattern { name: String, pattern_id: u16 } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `contains` [INFO] [stdout] --> src/range.rs:23:12 [INFO] [stdout] | [INFO] [stdout] 23 | pub fn contains(&self, point: u64) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 14s [INFO] running `Command { std: "docker" "inspect" "c43b5c38f368ed348887aabe6e310d260de09b202b4e84bfd3c5befd797cb9b9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c43b5c38f368ed348887aabe6e310d260de09b202b4e84bfd3c5befd797cb9b9", kill_on_drop: false }` [INFO] [stdout] c43b5c38f368ed348887aabe6e310d260de09b202b4e84bfd3c5befd797cb9b9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 569f43beaa2250046502f230d97dab363a82b02cc90c55f3d4f03e298d3a0db3 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "569f43beaa2250046502f230d97dab363a82b02cc90c55f3d4f03e298d3a0db3", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling cast v0.2.2 [INFO] [stderr] Compiling crossbeam-utils v0.6.5 [INFO] [stderr] Compiling walkdir v2.2.8 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling rand_xoshiro v0.1.0 [INFO] [stderr] Compiling serde_json v1.0.40 [INFO] [stderr] Compiling criterion-plot v0.3.1 [INFO] [stderr] Compiling crossbeam-epoch v0.7.1 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling crossbeam-deque v0.7.1 [INFO] [stderr] Compiling rayon-core v1.6.0 [INFO] [stderr] Compiling tinytemplate v1.0.2 [INFO] [stderr] Compiling rayon v1.2.0 [INFO] [stderr] Compiling criterion v0.2.11 [INFO] [stderr] Compiling find-tfbs v1.0.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: variant is never constructed: `OtherPattern` [INFO] [stdout] --> src/types.rs:89:6 [INFO] [stdout] | [INFO] [stdout] 89 | OtherPattern { name: String, pattern_id: u16 } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 33.19s [INFO] running `Command { std: "docker" "inspect" "569f43beaa2250046502f230d97dab363a82b02cc90c55f3d4f03e298d3a0db3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "569f43beaa2250046502f230d97dab363a82b02cc90c55f3d4f03e298d3a0db3", kill_on_drop: false }` [INFO] [stdout] 569f43beaa2250046502f230d97dab363a82b02cc90c55f3d4f03e298d3a0db3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-09-08" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e040b68376b0ed2e2e41450c7a99a5612616e8c1e0a98fb8d96a81e389c1c598 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e040b68376b0ed2e2e41450c7a99a5612616e8c1e0a98fb8d96a81e389c1c598", kill_on_drop: false }` [INFO] [stderr] warning: variant is never constructed: `OtherPattern` [INFO] [stderr] --> src/types.rs:89:6 [INFO] [stderr] | [INFO] [stderr] 89 | OtherPattern { name: String, pattern_id: u16 } [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: `find-tfbs` (bin "find-tfbs" test) generated 1 warning [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.27s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/find_tfbs-cbc7546c8ea45223) [INFO] [stdout] [INFO] [stdout] running 15 tests [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_deletion ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_insert ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_snp ... ok [INFO] [stdout] test pattern::tests::test_matches ... ok [INFO] [stdout] test range::tests::test_range_contains ... ok [INFO] [stdout] test range::tests::test_range_display ... ok [INFO] [stdout] test pattern::tests::test_match_gataa ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_with_no_diff ... ok [INFO] [stdout] test bed::tests::test_merge_bed ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_two_snp ... ok [INFO] [stdout] test tests::test_count_matches ... ok [INFO] [stdout] test pattern::tests::test_parse_threshold ... FAILED [INFO] [stdout] test pattern::tests::test_parse_pwm_files ... FAILED [INFO] [stdout] test tests::test_integration_one_polymorphism ... FAILED [INFO] [stdout] test tests::test_integration_no_polymorphism ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- pattern::tests::test_parse_threshold stdout ---- [INFO] [stdout] thread 'pattern::tests::test_parse_threshold' panicked at 'Could not open file thresholds/GATA1_HUMAN.H11MO.0.A.thr: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/pattern.rs:115:45 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55d21086f53c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55d21086f53c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55d21086f53c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55d21086f53c - ::fmt::h9a78218788c14e18 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55d210894f4c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stdout] 5: 0x55d21086bf65 - std::io::Write::write_fmt::hb6383f24fe197d3c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stdout] 6: 0x55d2108711f0 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55d2108711f0 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55d2108711f0 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stdout] 9: 0x55d210870de2 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:224:9 [INFO] [stdout] 10: 0x55d2108718a4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stdout] 11: 0x55d210871380 - std::panicking::begin_panic_handler::{{closure}}::h9c42b65a42d06a7a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:521:13 [INFO] [stdout] 12: 0x55d21086fa04 - std::sys_common::backtrace::__rust_end_short_backtrace::hc791bddfe31e532c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55d2108712e9 - rust_begin_unwind [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:517:5 [INFO] [stdout] 14: 0x55d21061c161 - core::panicking::panic_fmt::hf9de31d4acbce4db [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panicking.rs:101:14 [INFO] [stdout] 15: 0x55d21061c253 - core::result::unwrap_failed::ha0c84e81219e5878 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1617:5 [INFO] [stdout] 16: 0x55d21067ed2f - core::result::Result::expect::ha6d3701d7a831f9b [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1259:23 [INFO] [stdout] 17: 0x55d2106cdde3 - find_tfbs::pattern::read_lines::h8de8b122e5c53e94 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:115:16 [INFO] [stdout] 18: 0x55d2106cbd66 - find_tfbs::pattern::parse_threshold_file::h671cee97b779be63 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:20:24 [INFO] [stdout] 19: 0x55d2106a574f - find_tfbs::pattern::tests::test_parse_threshold::hfe2f30bfcffc1434 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:264:25 [INFO] [stdout] 20: 0x55d2106a570a - find_tfbs::pattern::tests::test_parse_threshold::{{closure}}::h750d549c98a73c7c [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:263:5 [INFO] [stdout] 21: 0x55d2106c59ce - core::ops::function::FnOnce::call_once::he1a072c88a168d93 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x55d21070ccc3 - core::ops::function::FnOnce::call_once::h61555a204318cc58 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55d21070ccc3 - test::__rust_begin_short_backtrace::h8331e7b1cc7a6e62 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:578:5 [INFO] [stdout] 24: 0x55d21070b748 - as core::ops::function::FnOnce>::call_once::h98582e597fa7f145 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 25: 0x55d21070b748 - as core::ops::function::FnOnce<()>>::call_once::h38fa7a0826ecff45 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 26: 0x55d21070b748 - std::panicking::try::do_call::h5b27d1cfffaa9f87 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 27: 0x55d21070b748 - std::panicking::try::h86f7124b3264bcbe [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 28: 0x55d21070b748 - std::panic::catch_unwind::h42dadf3598df7528 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 29: 0x55d21070b748 - test::run_test_in_process::h9d4b7510f0910050 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:601:18 [INFO] [stdout] 30: 0x55d21070b748 - test::run_test::run_test_inner::{{closure}}::h9b17f1fd181fe294 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:493:39 [INFO] [stdout] 31: 0x55d2106d929e - test::run_test::run_test_inner::{{closure}}::h476f9211dfec6075 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:520:37 [INFO] [stdout] 32: 0x55d2106d929e - std::sys_common::backtrace::__rust_begin_short_backtrace::h5c2db6945645950d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 33: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h791169ea9ba5492d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 34: 0x55d2106ddb38 - as core::ops::function::FnOnce<()>>::call_once::he930357ede3f4b4d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 35: 0x55d2106ddb38 - std::panicking::try::do_call::h0de4b1dd08a9aa80 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 36: 0x55d2106ddb38 - std::panicking::try::hf5b5c530df698d97 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 37: 0x55d2106ddb38 - std::panic::catch_unwind::hed97078f17dbf191 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 38: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::h2e673950929cba93 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 39: 0x55d2106ddb38 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h8e18ddd18a52f010 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 40: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::hbbbb32ef11ea0ad2 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 41: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::h3b8ef23699fc5385 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 42: 0x55d210876b13 - std::sys::unix::thread::Thread::new::thread_start::ha57f5cba35f709b7 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 43: 0x7f507559e609 - start_thread [INFO] [stdout] 44: 0x7f507536e293 - clone [INFO] [stdout] 45: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- pattern::tests::test_parse_pwm_files stdout ---- [INFO] [stdout] thread 'pattern::tests::test_parse_pwm_files' panicked at 'Could not open file thresholds/GATA1_HUMAN.H11MO.1.A.thr: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/pattern.rs:115:45 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55d21086f53c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55d21086f53c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55d21086f53c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55d21086f53c - ::fmt::h9a78218788c14e18 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55d210894f4c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stdout] 5: 0x55d21086bf65 - std::io::Write::write_fmt::hb6383f24fe197d3c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stdout] 6: 0x55d2108711f0 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55d2108711f0 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55d2108711f0 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stdout] 9: 0x55d210870de2 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:224:9 [INFO] [stdout] 10: 0x55d2108718a4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stdout] 11: 0x55d210871380 - std::panicking::begin_panic_handler::{{closure}}::h9c42b65a42d06a7a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:521:13 [INFO] [stdout] 12: 0x55d21086fa04 - std::sys_common::backtrace::__rust_end_short_backtrace::hc791bddfe31e532c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55d2108712e9 - rust_begin_unwind [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:517:5 [INFO] [stdout] 14: 0x55d21061c161 - core::panicking::panic_fmt::hf9de31d4acbce4db [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panicking.rs:101:14 [INFO] [stdout] 15: 0x55d21061c253 - core::result::unwrap_failed::ha0c84e81219e5878 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1617:5 [INFO] [stdout] 16: 0x55d21067ed2f - core::result::Result::expect::ha6d3701d7a831f9b [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1259:23 [INFO] [stdout] 17: 0x55d2106cdde3 - find_tfbs::pattern::read_lines::h8de8b122e5c53e94 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:115:16 [INFO] [stdout] 18: 0x55d2106cbd66 - find_tfbs::pattern::parse_threshold_file::h671cee97b779be63 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:20:24 [INFO] [stdout] 19: 0x55d2106cc869 - find_tfbs::pattern::parse_pwm_files::haa941511d9aa26f5 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:43:19 [INFO] [stdout] 20: 0x55d2106a3966 - find_tfbs::pattern::tests::test_parse_pwm_files::h0e7bfe4ee70f9f6e [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:194:20 [INFO] [stdout] 21: 0x55d2106a37fa - find_tfbs::pattern::tests::test_parse_pwm_files::{{closure}}::h1be6b04b251d1f9a [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:193:5 [INFO] [stdout] 22: 0x55d2106c550e - core::ops::function::FnOnce::call_once::h35df351b8eb4797a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55d21070ccc3 - core::ops::function::FnOnce::call_once::h61555a204318cc58 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 24: 0x55d21070ccc3 - test::__rust_begin_short_backtrace::h8331e7b1cc7a6e62 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:578:5 [INFO] [stdout] 25: 0x55d21070b748 - as core::ops::function::FnOnce>::call_once::h98582e597fa7f145 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 26: 0x55d21070b748 - as core::ops::function::FnOnce<()>>::call_once::h38fa7a0826ecff45 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 27: 0x55d21070b748 - std::panicking::try::do_call::h5b27d1cfffaa9f87 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 28: 0x55d21070b748 - std::panicking::try::h86f7124b3264bcbe [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 29: 0x55d21070b748 - std::panic::catch_unwind::h42dadf3598df7528 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 30: 0x55d21070b748 - test::run_test_in_process::h9d4b7510f0910050 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:601:18 [INFO] [stdout] 31: 0x55d21070b748 - test::run_test::run_test_inner::{{closure}}::h9b17f1fd181fe294 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:493:39 [INFO] [stdout] 32: 0x55d2106d929e - test::run_test::run_test_inner::{{closure}}::h476f9211dfec6075 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:520:37 [INFO] [stdout] 33: 0x55d2106d929e - std::sys_common::backtrace::__rust_begin_short_backtrace::h5c2db6945645950d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 34: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h791169ea9ba5492d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 35: 0x55d2106ddb38 - as core::ops::function::FnOnce<()>>::call_once::he930357ede3f4b4d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 36: 0x55d2106ddb38 - std::panicking::try::do_call::h0de4b1dd08a9aa80 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 37: 0x55d2106ddb38 - std::panicking::try::hf5b5c530df698d97 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 38: 0x55d2106ddb38 - std::panic::catch_unwind::hed97078f17dbf191 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 39: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::h2e673950929cba93 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 40: 0x55d2106ddb38 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h8e18ddd18a52f010 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 41: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::hbbbb32ef11ea0ad2 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 42: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::h3b8ef23699fc5385 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 43: 0x55d210876b13 - std::sys::unix::thread::Thread::new::thread_start::ha57f5cba35f709b7 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 44: 0x7f507559e609 - start_thread [INFO] [stdout] 45: 0x7f507536e293 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::test_integration_one_polymorphism stdout ---- [INFO] [stdout] Loaded PWM ACGT (len 4, id 0, min_score 3999) [INFO] [stdout] PWM ACGT 3999 + 4 [INFO] [stdout] PWM ACGT 3999 - 4 [INFO] [stdout] Loaded test_data/regions1.bed: 5 peaks covering 50 bp [INFO] [stdout] Loaded test_data/regions2.bed: 4 peaks covering 26 bp [INFO] [stdout] Merged all region files: 5 merged regions covering 71 bp [INFO] [stdout] Reading 4 samples out of 4 [INFO] [stdout] Spawned one worker [INFO] [stdout] Patched haplotype (freq=1): 97 AAAGCGTAAAAAAAAAAAAAAA [INFO] [stdout] Variant: 100 A->G [INFO] [stdout] Reference haplotype (freq=7): 97 AAAACGTAAAAAAAAAAAAAAA [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=+ [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=- [INFO] [stdout] Min and max count: 2 4 [INFO] [stdout] [INFO] [stdout] Peak 1/5 0 ms (1 total) 100 115 2 haplotypes 1 variants 14 matches [INFO] [stdout] Reference haplotype (freq=8): 115 AAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 2/5 0 ms (1 total) 118 130 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 147 AAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 3/5 0 ms (1 total) 150 160 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 158 AAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 4/5 0 ms (1 total) 161 165 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 177 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 5/5 0 ms (1 total) 180 210 1 haplotypes 0 variants 0 matches [INFO] [stdout] thread '' panicked at 'Could not create output file: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" }', src/main.rs:267:115 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55d21086f53c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55d21086f53c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55d21086f53c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55d21086f53c - ::fmt::h9a78218788c14e18 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55d210894f4c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stdout] 5: 0x55d21086bf65 - std::io::Write::write_fmt::hb6383f24fe197d3c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stdout] 6: 0x55d2108711f0 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55d2108711f0 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55d2108711f0 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stdout] 9: 0x55d210870de2 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:224:9 [INFO] [stdout] 10: 0x55d2108718a4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stdout] 11: 0x55d210871380 - std::panicking::begin_panic_handler::{{closure}}::h9c42b65a42d06a7a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:521:13 [INFO] [stdout] 12: 0x55d21086fa04 - std::sys_common::backtrace::__rust_end_short_backtrace::hc791bddfe31e532c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55d2108712e9 - rust_begin_unwind [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:517:5 [INFO] [stdout] 14: 0x55d21061c161 - core::panicking::panic_fmt::hf9de31d4acbce4db [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panicking.rs:101:14 [INFO] [stdout] 15: 0x55d21061c253 - core::result::unwrap_failed::ha0c84e81219e5878 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1617:5 [INFO] [stdout] 16: 0x55d21067ed2f - core::result::Result::expect::ha6d3701d7a831f9b [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1259:23 [INFO] [stdout] 17: 0x55d21064da2b - find_tfbs::run::{{closure}}::h17d4720b4e8a3cce [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:267:84 [INFO] [stdout] 18: 0x55d210661d8c - std::sys_common::backtrace::__rust_begin_short_backtrace::h642ba07409c49c03 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 19: 0x55d2106d1bf0 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h28e906f2ce5525fe [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 20: 0x55d210683670 - as core::ops::function::FnOnce<()>>::call_once::h96d5ea892a7c9244 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 21: 0x55d210685881 - std::panicking::try::do_call::h0b8de2144d30b7e8 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 22: 0x55d2106902cb - __rust_try [INFO] [stdout] 23: 0x55d2106857c1 - std::panicking::try::hef16c1e777cf2c50 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 24: 0x55d210661f50 - std::panic::catch_unwind::h16d08241261d9001 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 25: 0x55d2106d16b5 - std::thread::Builder::spawn_unchecked::{{closure}}::h93d781e61c2dfa9c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 26: 0x55d2106c530e - core::ops::function::FnOnce::call_once{{vtable.shim}}::hf1b02d5a9e08e76b [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 27: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::hbbbb32ef11ea0ad2 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 28: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::h3b8ef23699fc5385 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 29: 0x55d210876b13 - std::sys::unix::thread::Thread::new::thread_start::ha57f5cba35f709b7 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 30: 0x7f507559e609 - start_thread [INFO] [stdout] 31: 0x7f507536e293 - clone [INFO] [stdout] 32: 0x0 - [INFO] [stdout] Writer thread joined. End program [INFO] [stdout] thread 'tests::test_integration_one_polymorphism' panicked at 'unable to read file: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/main.rs:565:82 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55d21086f53c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55d21086f53c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55d21086f53c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55d21086f53c - ::fmt::h9a78218788c14e18 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55d210894f4c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stdout] 5: 0x55d21086bf65 - std::io::Write::write_fmt::hb6383f24fe197d3c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stdout] 6: 0x55d2108711f0 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55d2108711f0 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55d2108711f0 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stdout] 9: 0x55d210870de2 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:224:9 [INFO] [stdout] 10: 0x55d2108718a4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stdout] 11: 0x55d210871380 - std::panicking::begin_panic_handler::{{closure}}::h9c42b65a42d06a7a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:521:13 [INFO] [stdout] 12: 0x55d21086fa04 - std::sys_common::backtrace::__rust_end_short_backtrace::hc791bddfe31e532c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55d2108712e9 - rust_begin_unwind [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:517:5 [INFO] [stdout] 14: 0x55d21061c161 - core::panicking::panic_fmt::hf9de31d4acbce4db [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panicking.rs:101:14 [INFO] [stdout] 15: 0x55d21061c253 - core::result::unwrap_failed::ha0c84e81219e5878 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1617:5 [INFO] [stdout] 16: 0x55d21067e895 - core::result::Result::expect::h40d9c88d4676fd97 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1259:23 [INFO] [stdout] 17: 0x55d21066f41e - find_tfbs::tests::test_integration_one_polymorphism::hae162e37671808c1 [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:565:22 [INFO] [stdout] 18: 0x55d21066ee8a - find_tfbs::tests::test_integration_one_polymorphism::{{closure}}::h71c6f7b5a218018b [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:560:5 [INFO] [stdout] 19: 0x55d2106c583e - core::ops::function::FnOnce::call_once::ha3a9d87fb709976d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55d21070ccc3 - core::ops::function::FnOnce::call_once::h61555a204318cc58 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55d21070ccc3 - test::__rust_begin_short_backtrace::h8331e7b1cc7a6e62 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:578:5 [INFO] [stdout] 22: 0x55d21070b748 - as core::ops::function::FnOnce>::call_once::h98582e597fa7f145 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 23: 0x55d21070b748 - as core::ops::function::FnOnce<()>>::call_once::h38fa7a0826ecff45 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 24: 0x55d21070b748 - std::panicking::try::do_call::h5b27d1cfffaa9f87 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 25: 0x55d21070b748 - std::panicking::try::h86f7124b3264bcbe [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 26: 0x55d21070b748 - std::panic::catch_unwind::h42dadf3598df7528 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 27: 0x55d21070b748 - test::run_test_in_process::h9d4b7510f0910050 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:601:18 [INFO] [stdout] 28: 0x55d21070b748 - test::run_test::run_test_inner::{{closure}}::h9b17f1fd181fe294 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:493:39 [INFO] [stdout] 29: 0x55d2106d929e - test::run_test::run_test_inner::{{closure}}::h476f9211dfec6075 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:520:37 [INFO] [stdout] 30: 0x55d2106d929e - std::sys_common::backtrace::__rust_begin_short_backtrace::h5c2db6945645950d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 31: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h791169ea9ba5492d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 32: 0x55d2106ddb38 - as core::ops::function::FnOnce<()>>::call_once::he930357ede3f4b4d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 33: 0x55d2106ddb38 - std::panicking::try::do_call::h0de4b1dd08a9aa80 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 34: 0x55d2106ddb38 - std::panicking::try::hf5b5c530df698d97 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 35: 0x55d2106ddb38 - std::panic::catch_unwind::hed97078f17dbf191 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 36: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::h2e673950929cba93 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 37: 0x55d2106ddb38 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h8e18ddd18a52f010 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::hbbbb32ef11ea0ad2 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 39: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::h3b8ef23699fc5385 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 40: 0x55d210876b13 - std::sys::unix::thread::Thread::new::thread_start::ha57f5cba35f709b7 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 41: 0x7f507559e609 - start_thread [INFO] [stdout] 42: 0x7f507536e293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::test_integration_no_polymorphism stdout ---- [INFO] [stdout] Loaded PWM ACGT (len 4, id 0, min_score 3999) [INFO] [stdout] PWM ACGT 3999 + 4 [INFO] [stdout] PWM ACGT 3999 - 4 [INFO] [stdout] Loaded test_data/regions1.bed: 5 peaks covering 50 bp [INFO] [stdout] Loaded test_data/regions2.bed: 4 peaks covering 26 bp [INFO] [stdout] Merged all region files: 5 merged regions covering 71 bp [INFO] [stdout] Reading 4 samples out of 4 [INFO] [stdout] Spawned one worker [INFO] [stdout] thread '' panicked at 'Could not create output file: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" }', src/main.rs:267:115 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55d21086f53c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55d21086f53c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55d21086f53c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55d21086f53c - ::fmt::h9a78218788c14e18 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55d210894f4c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stdout] 5: 0x55d21086bf65 - std::io::Write::write_fmt::hb6383f24fe197d3c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stdout] 6: 0x55d2108711f0 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55d2108711f0 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55d2108711f0 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stdout] 9: 0x55d210870de2 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:224:9 [INFO] [stdout] 10: 0x55d2108718a4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stdout] 11: 0x55d210871380 - std::panicking::begin_panic_handler::{{closure}}::h9c42b65a42d06a7a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:521:13 [INFO] [stdout] 12: 0x55d21086fa04 - std::sys_common::backtrace::__rust_end_short_backtrace::hc791bddfe31e532c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55d2108712e9 - rust_begin_unwind [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:517:5 [INFO] [stdout] 14: 0x55d21061c161 - core::panicking::panic_fmt::hf9de31d4acbce4db [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panicking.rs:101:14 [INFO] [stdout] 15: 0x55d21061c253 - core::result::unwrap_failed::ha0c84e81219e5878 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1617:5 [INFO] [stdout] 16: 0x55d21067ed2f - core::result::Result::expect::ha6d3701d7a831f9b [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1259:23 [INFO] [stdout] 17: 0x55d21064da2b - find_tfbs::run::{{closure}}::h17d4720b4e8a3cce [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:267:84 [INFO] [stdout] 18: 0x55d210661d8c - std::sys_common::backtrace::__rust_begin_short_backtrace::h642ba07409c49c03 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 19: 0x55d2106d1bf0 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h28e906f2ce5525fe [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 20: 0x55d210683670 - as core::ops::function::FnOnce<()>>::call_once::h96d5ea892a7c9244 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 21: 0x55d210685881 - std::panicking::try::do_call::h0b8de2144d30b7e8 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 22: 0x55d2106902cb - __rust_try [INFO] [stdout] 23: 0x55d2106857c1 - std::panicking::try::hef16c1e777cf2c50 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 24: 0x55d210661f50 - std::panic::catch_unwind::h16d08241261d9001 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 25: 0x55d2106d16b5 - std::thread::Builder::spawn_unchecked::{{closure}}::h93d781e61c2dfa9c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 26: 0x55d2106c530e - core::ops::function::FnOnce::call_once{{vtable.shim}}::hf1b02d5a9e08e76b [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 27: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::hbbbb32ef11ea0ad2 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 28: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::h3b8ef23699fc5385 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 29: 0x55d210876b13 - std::sys::unix::thread::Thread::new::thread_start::ha57f5cba35f709b7 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 30: 0x7f507559e609 - start_thread [INFO] [stdout] 31: 0x7f507536e293 - clone [INFO] [stdout] 32: 0x0 - [INFO] [stdout] Reference haplotype (freq=8): 97 AAAACGTAAAAAAAAAAAAAAA [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=+ [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=- [INFO] [stdout] Min and max count: 4 4 [INFO] [stdout] [INFO] [stdout] Peak 1/5 71 ms (72 total) 100 115 1 haplotypes 0 variants 16 matches [INFO] [stdout] Reference haplotype (freq=8): 115 AAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 2/5 0 ms (73 total) 118 130 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 147 AAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 3/5 0 ms (73 total) 150 160 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 158 AAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 4/5 0 ms (73 total) 161 165 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 177 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 5/5 0 ms (73 total) 180 210 1 haplotypes 0 variants 0 matches [INFO] [stdout] Writer thread joined. End program [INFO] [stdout] thread 'tests::test_integration_no_polymorphism' panicked at 'unable to read file: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/main.rs:554:82 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55d21086f53c - std::backtrace_rs::backtrace::libunwind::trace::h51faa62df48810e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55d21086f53c - std::backtrace_rs::backtrace::trace_unsynchronized::h91de4d8e16d607e4 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55d21086f53c - std::sys_common::backtrace::_print_fmt::h71b0935f97e4322c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55d21086f53c - ::fmt::h9a78218788c14e18 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55d210894f4c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/fmt/mod.rs:1150:17 [INFO] [stdout] 5: 0x55d21086bf65 - std::io::Write::write_fmt::hb6383f24fe197d3c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/io/mod.rs:1667:15 [INFO] [stdout] 6: 0x55d2108711f0 - std::sys_common::backtrace::_print::h4b77abc4d907ed0e [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55d2108711f0 - std::sys_common::backtrace::print::hb170c60b542377ad [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55d2108711f0 - std::panicking::default_hook::{{closure}}::h12bbda9af8901ee3 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:210:50 [INFO] [stdout] 9: 0x55d210870de2 - std::panicking::default_hook::h8c6c66d3f3ba6768 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:224:9 [INFO] [stdout] 10: 0x55d2108718a4 - std::panicking::rust_panic_with_hook::h36f2fa0bb09f4069 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:624:17 [INFO] [stdout] 11: 0x55d210871380 - std::panicking::begin_panic_handler::{{closure}}::h9c42b65a42d06a7a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:521:13 [INFO] [stdout] 12: 0x55d21086fa04 - std::sys_common::backtrace::__rust_end_short_backtrace::hc791bddfe31e532c [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55d2108712e9 - rust_begin_unwind [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:517:5 [INFO] [stdout] 14: 0x55d21061c161 - core::panicking::panic_fmt::hf9de31d4acbce4db [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panicking.rs:101:14 [INFO] [stdout] 15: 0x55d21061c253 - core::result::unwrap_failed::ha0c84e81219e5878 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1617:5 [INFO] [stdout] 16: 0x55d21067e895 - core::result::Result::expect::h40d9c88d4676fd97 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/result.rs:1259:23 [INFO] [stdout] 17: 0x55d21066ebde - find_tfbs::tests::test_integration_no_polymorphism::h41e94e0642b4e98b [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:554:22 [INFO] [stdout] 18: 0x55d21066e64a - find_tfbs::tests::test_integration_no_polymorphism::{{closure}}::h1b27bace57ebc965 [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:549:5 [INFO] [stdout] 19: 0x55d2106c55fe - core::ops::function::FnOnce::call_once::h59035ceabf6c931a [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55d21070ccc3 - core::ops::function::FnOnce::call_once::h61555a204318cc58 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55d21070ccc3 - test::__rust_begin_short_backtrace::h8331e7b1cc7a6e62 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:578:5 [INFO] [stdout] 22: 0x55d21070b748 - as core::ops::function::FnOnce>::call_once::h98582e597fa7f145 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 23: 0x55d21070b748 - as core::ops::function::FnOnce<()>>::call_once::h38fa7a0826ecff45 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 24: 0x55d21070b748 - std::panicking::try::do_call::h5b27d1cfffaa9f87 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 25: 0x55d21070b748 - std::panicking::try::h86f7124b3264bcbe [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 26: 0x55d21070b748 - std::panic::catch_unwind::h42dadf3598df7528 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 27: 0x55d21070b748 - test::run_test_in_process::h9d4b7510f0910050 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:601:18 [INFO] [stdout] 28: 0x55d21070b748 - test::run_test::run_test_inner::{{closure}}::h9b17f1fd181fe294 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:493:39 [INFO] [stdout] 29: 0x55d2106d929e - test::run_test::run_test_inner::{{closure}}::h476f9211dfec6075 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/test/src/lib.rs:520:37 [INFO] [stdout] 30: 0x55d2106d929e - std::sys_common::backtrace::__rust_begin_short_backtrace::h5c2db6945645950d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 31: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h791169ea9ba5492d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:481:17 [INFO] [stdout] 32: 0x55d2106ddb38 - as core::ops::function::FnOnce<()>>::call_once::he930357ede3f4b4d [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 33: 0x55d2106ddb38 - std::panicking::try::do_call::h0de4b1dd08a9aa80 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:403:40 [INFO] [stdout] 34: 0x55d2106ddb38 - std::panicking::try::hf5b5c530df698d97 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panicking.rs:367:19 [INFO] [stdout] 35: 0x55d2106ddb38 - std::panic::catch_unwind::hed97078f17dbf191 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/panic.rs:129:14 [INFO] [stdout] 36: 0x55d2106ddb38 - std::thread::Builder::spawn_unchecked::{{closure}}::h2e673950929cba93 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/thread/mod.rs:480:30 [INFO] [stdout] 37: 0x55d2106ddb38 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h8e18ddd18a52f010 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::hbbbb32ef11ea0ad2 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 39: 0x55d210876b13 - as core::ops::function::FnOnce>::call_once::h3b8ef23699fc5385 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/alloc/src/boxed.rs:1636:9 [INFO] [stdout] 40: 0x55d210876b13 - std::sys::unix::thread::Thread::new::thread_start::ha57f5cba35f709b7 [INFO] [stdout] at /rustc/e784c962ea252f0874a4305168077e7048cb39e9/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 41: 0x7f507559e609 - start_thread [INFO] [stdout] 42: 0x7f507536e293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] pattern::tests::test_parse_pwm_files [INFO] [stdout] pattern::tests::test_parse_threshold [INFO] [stdout] tests::test_integration_no_polymorphism [INFO] [stdout] tests::test_integration_one_polymorphism [INFO] [stdout] [INFO] [stdout] test result: FAILED. 11 passed; 4 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.08s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin find-tfbs' [INFO] running `Command { std: "docker" "inspect" "e040b68376b0ed2e2e41450c7a99a5612616e8c1e0a98fb8d96a81e389c1c598", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e040b68376b0ed2e2e41450c7a99a5612616e8c1e0a98fb8d96a81e389c1c598", kill_on_drop: false }` [INFO] [stdout] e040b68376b0ed2e2e41450c7a99a5612616e8c1e0a98fb8d96a81e389c1c598