[INFO] fetching crate rnafamprob 0.1.0... [INFO] testing rnafamprob-0.1.0 against 1.55.0 for beta-1.56-1 [INFO] extracting crate rnafamprob 0.1.0 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate rnafamprob 0.1.0 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate rnafamprob 0.1.0 [INFO] finished tweaking crates.io crate rnafamprob 0.1.0 [INFO] tweaked toml for crates.io crate rnafamprob 0.1.0 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate crates.io crate rnafamprob 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ff01692efcd16a7790fe41456064384c657fd048f07b22994dc8071bba494be8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ff01692efcd16a7790fe41456064384c657fd048f07b22994dc8071bba494be8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ff01692efcd16a7790fe41456064384c657fd048f07b22994dc8071bba494be8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ff01692efcd16a7790fe41456064384c657fd048f07b22994dc8071bba494be8", kill_on_drop: false }` [INFO] [stdout] ff01692efcd16a7790fe41456064384c657fd048f07b22994dc8071bba494be8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 73a602fb5fd0504e8c75cf1412f62381650280b158a107a385944ef5388fafe1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "73a602fb5fd0504e8c75cf1412f62381650280b158a107a385944ef5388fafe1", kill_on_drop: false }` [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Compiling ndarray v0.9.1 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling regex-syntax v0.5.6 [INFO] [stderr] Compiling bio-seq-algos v0.1.12 [INFO] [stderr] Compiling bit-set v0.4.0 [INFO] [stderr] Compiling getopts v0.2.21 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling regex-automata v0.1.8 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling syn v1.0.5 [INFO] [stderr] Compiling rna-ss-params v0.1.13 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.6.10 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v0.5.2 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling serde_derive v1.0.101 [INFO] [stderr] Compiling serde v1.0.101 [INFO] [stderr] Compiling bstr v0.2.8 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling bio v0.20.3 [INFO] [stderr] Compiling rna-algos v0.1.10 [INFO] [stderr] Compiling rnafamprob v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unnecessary trailing semicolon [INFO] [stdout] --> src/lib.rs:1279:152 [INFO] [stdout] | [INFO] [stdout] 1279 | ...[&pos_pair_2] + sta_fe_params.extending_gap_penalty;; [INFO] [stdout] | ^ help: remove this semicolon [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(redundant_semicolons)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:49:72 [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | ^^^^^ [INFO] [stdout] help: or use std::panic::panic_any instead [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 54.33s [INFO] running `Command { std: "docker" "inspect" "73a602fb5fd0504e8c75cf1412f62381650280b158a107a385944ef5388fafe1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "73a602fb5fd0504e8c75cf1412f62381650280b158a107a385944ef5388fafe1", kill_on_drop: false }` [INFO] [stdout] 73a602fb5fd0504e8c75cf1412f62381650280b158a107a385944ef5388fafe1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d627508c12f031d19474200b3061702a0ece9f4e4f646e8535fef93ae0c77222 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d627508c12f031d19474200b3061702a0ece9f4e4f646e8535fef93ae0c77222", kill_on_drop: false }` [INFO] [stdout] warning: unnecessary trailing semicolon [INFO] [stdout] --> src/lib.rs:1279:152 [INFO] [stdout] | [INFO] [stdout] 1279 | ...[&pos_pair_2] + sta_fe_params.extending_gap_penalty;; [INFO] [stdout] | ^ help: remove this semicolon [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(redundant_semicolons)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling rnafamprob v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:49:72 [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | ^^^^^ [INFO] [stdout] help: or use std::panic::panic_any instead [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary trailing semicolon [INFO] [stdout] --> src/lib.rs:1279:152 [INFO] [stdout] | [INFO] [stdout] 1279 | ...[&pos_pair_2] + sta_fe_params.extending_gap_penalty;; [INFO] [stdout] | ^ help: remove this semicolon [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(redundant_semicolons)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:26:1 [INFO] [stdout] | [INFO] [stdout] 26 | / lazy_static! { [INFO] [stdout] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 28 | | [ [INFO] [stdout] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:49:72 [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | ^^^^^ [INFO] [stdout] help: or use std::panic::panic_any instead [INFO] [stdout] | [INFO] [stdout] 49 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.91s [INFO] running `Command { std: "docker" "inspect" "d627508c12f031d19474200b3061702a0ece9f4e4f646e8535fef93ae0c77222", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d627508c12f031d19474200b3061702a0ece9f4e4f646e8535fef93ae0c77222", kill_on_drop: false }` [INFO] [stdout] d627508c12f031d19474200b3061702a0ece9f4e4f646e8535fef93ae0c77222 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6c85a6c00a212d993901d4f9fdf144de4f6d6e39c44c6acd9e378c3492e59ccc [INFO] running `Command { std: "docker" "start" "-a" "6c85a6c00a212d993901d4f9fdf144de4f6d6e39c44c6acd9e378c3492e59ccc", kill_on_drop: false }` [INFO] [stderr] warning: unnecessary trailing semicolon [INFO] [stderr] --> src/lib.rs:1279:152 [INFO] [stderr] | [INFO] [stderr] 1279 | ...[&pos_pair_2] + sta_fe_params.extending_gap_penalty;; [INFO] [stderr] | ^ help: remove this semicolon [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(redundant_semicolons)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stderr] --> src/utils.rs:26:1 [INFO] [stderr] | [INFO] [stderr] 26 | / lazy_static! { [INFO] [stderr] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stderr] 28 | | [ [INFO] [stderr] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stderr] ... | [INFO] [stderr] 44 | | }; [INFO] [stderr] 45 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stderr] --> src/utils.rs:26:1 [INFO] [stderr] | [INFO] [stderr] 26 | / lazy_static! { [INFO] [stderr] 27 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stderr] 28 | | [ [INFO] [stderr] 29 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stderr] ... | [INFO] [stderr] 44 | | }; [INFO] [stderr] 45 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: `rnafamprob` (lib) generated 5 warnings (2 duplicates) [INFO] [stderr] warning: `rnafamprob` (lib test) generated 5 warnings (5 duplicates) [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/main.rs:49:72 [INFO] [stderr] | [INFO] [stderr] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] help: add a "{}" format string to Display the message [INFO] [stderr] | [INFO] [stderr] 49 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stderr] | ^^^^^ [INFO] [stderr] help: or use std::panic::panic_any instead [INFO] [stderr] | [INFO] [stderr] 49 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `rnafamprob` (bin "rnafamprob") generated 1 warning [INFO] [stderr] warning: `rnafamprob` (bin "rnafamprob" test) generated 1 warning (1 duplicate) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rnafamprob-e57c05fbed96ff6a) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rnafamprob-a94c66ef13b93181) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/tests.rs (/opt/rustwide/target/debug/deps/tests-3b7878c6583f6666) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] error: test failed, to rerun pass '--test tests' [INFO] [stdout] test test_rnafam_program ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- test_rnafam_program stdout ---- [INFO] [stdout] thread 'test_rnafam_program' panicked at 'Failed to run the RNAfamProb program.: Os { code: 2, kind: NotFound, message: "No such file or directory" }', tests/tests.rs:19:45 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x558133c79110 - std::backtrace_rs::backtrace::libunwind::trace::ha0ad43e8a952bfe7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x558133c79110 - std::backtrace_rs::backtrace::trace_unsynchronized::h6830419c0c4130dc [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x558133c79110 - std::sys_common::backtrace::_print_fmt::h8f3516631ffa1ef5 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x558133c79110 - ::fmt::he1640d5f0d93f618 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x558133c9b9bc - core::fmt::write::h88012e1f01caeebf [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stdout] 5: 0x558133c761c5 - std::io::Write::write_fmt::h7728c39ea5632753 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/io/mod.rs:1665:15 [INFO] [stdout] 6: 0x558133c7b27b - std::sys_common::backtrace::_print::ha1f00492f406a015 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x558133c7b27b - std::sys_common::backtrace::print::hd54561b13feb6af3 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x558133c7b27b - std::panicking::default_hook::{{closure}}::h84fe124cd0864662 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x558133c7ad8c - std::panicking::default_hook::h5a8e74a76ce290a7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x558133c7b944 - std::panicking::rust_panic_with_hook::h67c812a4fe9d4c91 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x558133c7b427 - std::panicking::begin_panic_handler::{{closure}}::h33f9c1b96af300d7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x558133c7960c - std::sys_common::backtrace::__rust_end_short_backtrace::h51bae64be5921f0e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x558133c7b389 - rust_begin_unwind [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x558133c243a1 - core::panicking::panic_fmt::h12a3a3c256485fca [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x558133c24493 - core::result::unwrap_failed::h2d8d0952e3250de9 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/result.rs:1599:5 [INFO] [stdout] 16: 0x558133c26b8d - core::result::Result::expect::h95ea47910e5fc778 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/result.rs:1241:23 [INFO] [stdout] 17: 0x558133c28c75 - tests::run_command::h7a65872a6aae8691 [INFO] [stdout] at /opt/rustwide/workdir/tests/tests.rs:19:3 [INFO] [stdout] 18: 0x558133c28d8d - tests::test_rnafam_program::he8d1385484943866 [INFO] [stdout] at /opt/rustwide/workdir/tests/tests.rs:12:3 [INFO] [stdout] 19: 0x558133c28cba - tests::test_rnafam_program::{{closure}}::ha1c3f5a3d5616bc0 [INFO] [stdout] at /opt/rustwide/workdir/tests/tests.rs:8:1 [INFO] [stdout] 20: 0x558133c2759e - core::ops::function::FnOnce::call_once::hde703eb223a0efb5 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x558133c5c583 - core::ops::function::FnOnce::call_once::h5aba9a5d361d6c79 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x558133c5c583 - test::__rust_begin_short_backtrace::h705bb53b2b1d45e6 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:578:5 [INFO] [stdout] 23: 0x558133c5b038 - as core::ops::function::FnOnce>::call_once::ha20f614d7c0b2b6d [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 24: 0x558133c5b038 - as core::ops::function::FnOnce<()>>::call_once::hf02f19eeb64ceabd [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:347:9 [INFO] [stdout] 25: 0x558133c5b038 - std::panicking::try::do_call::h4bfab65eb3b4b036 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 26: 0x558133c5b038 - std::panicking::try::h6613a46a6d2b6f88 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 27: 0x558133c5b038 - std::panic::catch_unwind::h9f07b17b60991273 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stdout] 28: 0x558133c5b038 - test::run_test_in_process::hc38797eecf07854f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:601:18 [INFO] [stdout] 29: 0x558133c5b038 - test::run_test::run_test_inner::{{closure}}::hac209db8bce0fd77 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:493:39 [INFO] [stdout] 30: 0x558133c297cd - test::run_test::run_test_inner::{{closure}}::h4aefdd4b4a423e20 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:520:37 [INFO] [stdout] 31: 0x558133c297cd - std::sys_common::backtrace::__rust_begin_short_backtrace::h652c9e2663704700 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x558133c2dfa8 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hd84fd5e0b5b1f45f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/thread/mod.rs:476:17 [INFO] [stdout] 33: 0x558133c2dfa8 - as core::ops::function::FnOnce<()>>::call_once::he23556962a2ae14b [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:347:9 [INFO] [stdout] 34: 0x558133c2dfa8 - std::panicking::try::do_call::h67d4f93e1fbaa5f9 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 35: 0x558133c2dfa8 - std::panicking::try::h396886e678db815e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 36: 0x558133c2dfa8 - std::panic::catch_unwind::hc1d64dcecf0a00e0 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stdout] 37: 0x558133c2dfa8 - std::thread::Builder::spawn_unchecked::{{closure}}::hc2644cf33cb61d8e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/thread/mod.rs:475:30 [INFO] [stdout] 38: 0x558133c2dfa8 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h4473c2c77b66963f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x558133c805a7 - as core::ops::function::FnOnce>::call_once::h6bff7798948b1075 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 40: 0x558133c805a7 - as core::ops::function::FnOnce>::call_once::hc2d25ac38f6b2342 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 41: 0x558133c805a7 - std::sys::unix::thread::Thread::new::thread_start::hbba5bc368baac205 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys/unix/thread.rs:74:17 [INFO] [stdout] 42: 0x7fd23fea6609 - start_thread [INFO] [stdout] 43: 0x7fd23fc78293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] test_rnafam_program [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "6c85a6c00a212d993901d4f9fdf144de4f6d6e39c44c6acd9e378c3492e59ccc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6c85a6c00a212d993901d4f9fdf144de4f6d6e39c44c6acd9e378c3492e59ccc", kill_on_drop: false }` [INFO] [stdout] 6c85a6c00a212d993901d4f9fdf144de4f6d6e39c44c6acd9e378c3492e59ccc