[INFO] fetching crate rna-ss-params 0.1.20... [INFO] testing rna-ss-params-0.1.20 against 1.55.0 for beta-1.56-1 [INFO] extracting crate rna-ss-params 0.1.20 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate rna-ss-params 0.1.20 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate rna-ss-params 0.1.20 [INFO] finished tweaking crates.io crate rna-ss-params 0.1.20 [INFO] tweaked toml for crates.io crate rna-ss-params 0.1.20 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate crates.io crate rna-ss-params 0.1.20 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 2fc7fcd5edea090111a78abf8e08d5ba4bd599914375e1659d7c90ee118c4857 [INFO] running `Command { std: "docker" "start" "-a" "2fc7fcd5edea090111a78abf8e08d5ba4bd599914375e1659d7c90ee118c4857", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2fc7fcd5edea090111a78abf8e08d5ba4bd599914375e1659d7c90ee118c4857", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2fc7fcd5edea090111a78abf8e08d5ba4bd599914375e1659d7c90ee118c4857", kill_on_drop: false }` [INFO] [stdout] 2fc7fcd5edea090111a78abf8e08d5ba4bd599914375e1659d7c90ee118c4857 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] dbbbb54ba5591a054a06b16a6cbe8de7077a22268a286690ca5de96aac6c13a8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "dbbbb54ba5591a054a06b16a6cbe8de7077a22268a286690ca5de96aac6c13a8", kill_on_drop: false }` [INFO] [stderr] Compiling hashbrown v0.3.1 [INFO] [stderr] Compiling time v0.1.44 [INFO] [stderr] Compiling bio-seq-algos v0.1.17 [INFO] [stderr] Compiling rna-ss-params v0.1.20 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:87:1 [INFO] [stdout] | [INFO] [stdout] 87 | / lazy_static! { [INFO] [stdout] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stdout] 89 | | [ [INFO] [stdout] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stdout] ... | [INFO] [stdout] 113 | | }; [INFO] [stdout] 114 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:87:1 [INFO] [stdout] | [INFO] [stdout] 87 | / lazy_static! { [INFO] [stdout] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stdout] 89 | | [ [INFO] [stdout] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stdout] ... | [INFO] [stdout] 113 | | }; [INFO] [stdout] 114 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `suffix_chars` [INFO] [stdout] --> src/bin/generate_contrafold_params.rs:118:11 [INFO] [stdout] | [INFO] [stdout] 118 | let suffix_chars = suffix.chars().collect::>(); [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_suffix_chars` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/generate_contrafold_params.rs:14:72 [INFO] [stdout] | [INFO] [stdout] 14 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 14 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | ^^^^^ [INFO] [stdout] help: or use std::panic::panic_any instead [INFO] [stdout] | [INFO] [stdout] 14 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `INIT_BL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:10:7 [INFO] [stdout] | [INFO] [stdout] 10 | let INIT_BL_DELTA_FES: Vec = [ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_bl_delta_fes` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `THREE_PRIME_DE_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:17:11 [INFO] [stdout] | [INFO] [stdout] 17 | let mut THREE_PRIME_DE_DELTA_FES: DeDeltaFes = [[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `three_prime_de_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `FIVE_PRIME_DE_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:35:11 [INFO] [stdout] | [INFO] [stdout] 35 | let mut FIVE_PRIME_DE_DELTA_FES = [[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `five_prime_de_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `INIT_HL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:53:11 [INFO] [stdout] | [INFO] [stdout] 53 | let mut INIT_HL_DELTA_FES: Vec = vec![0., 0., 0., 5.4, 5.6, 5.7, 5.4, 6.0, 5.5, 6.4].iter().map(|&x| {scale(x)}).collect(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_hl_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `INIT_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:60:7 [INFO] [stdout] | [INFO] [stdout] 60 | let INIT_IL_DELTA_FES: Vec = vec![ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `TWO_VS_3_IL_TM_BONUS_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:66:11 [INFO] [stdout] | [INFO] [stdout] 66 | let mut TWO_VS_3_IL_TM_BONUS_DELTA_FES = [[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_3_il_tm_bonus_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `OTHER_IL_TM_BONUS_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:71:11 [INFO] [stdout] | [INFO] [stdout] 71 | let mut OTHER_IL_TM_BONUS_DELTA_FES = [[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `other_il_tm_bonus_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ONE_VS_1_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:76:11 [INFO] [stdout] | [INFO] [stdout] 76 | let mut ONE_VS_1_IL_DELTA_FES = [[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_1_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ONE_VS_2_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:269:11 [INFO] [stdout] | [INFO] [stdout] 269 | let mut ONE_VS_2_IL_DELTA_FES = [[[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES... [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_2_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `TWO_VS_2_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1002:11 [INFO] [stdout] | [INFO] [stdout] 1002 | let mut TWO_VS_2_IL_DELTA_FES = [[[[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASE... [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_2_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `STACK_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1623:11 [INFO] [stdout] | [INFO] [stdout] 1623 | let mut STACK_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `stack_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `HL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1641:11 [INFO] [stdout] | [INFO] [stdout] 1641 | let mut HL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `hl_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `IL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1678:11 [INFO] [stdout] | [INFO] [stdout] 1678 | let mut IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `il_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ONE_VS_MANY_IL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1715:11 [INFO] [stdout] | [INFO] [stdout] 1715 | let mut ONE_VS_MANY_IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_many_il_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `TWO_VS_3_IL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1752:11 [INFO] [stdout] | [INFO] [stdout] 1752 | let mut TWO_VS_3_IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_3_il_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ML_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1789:11 [INFO] [stdout] | [INFO] [stdout] 1789 | let mut ML_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `ml_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 16 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 29.95s [INFO] running `Command { std: "docker" "inspect" "dbbbb54ba5591a054a06b16a6cbe8de7077a22268a286690ca5de96aac6c13a8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "dbbbb54ba5591a054a06b16a6cbe8de7077a22268a286690ca5de96aac6c13a8", kill_on_drop: false }` [INFO] [stdout] dbbbb54ba5591a054a06b16a6cbe8de7077a22268a286690ca5de96aac6c13a8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b43c66a4ad29dd6553eff96e55397a474c627f8867d654d54965ff2314fef16d [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b43c66a4ad29dd6553eff96e55397a474c627f8867d654d54965ff2314fef16d", kill_on_drop: false }` [INFO] [stderr] Compiling rna-ss-params v0.1.20 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:87:1 [INFO] [stdout] | [INFO] [stdout] 87 | / lazy_static! { [INFO] [stdout] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stdout] 89 | | [ [INFO] [stdout] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stdout] ... | [INFO] [stdout] 113 | | }; [INFO] [stdout] 114 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:87:1 [INFO] [stdout] | [INFO] [stdout] 87 | / lazy_static! { [INFO] [stdout] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stdout] 89 | | [ [INFO] [stdout] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stdout] ... | [INFO] [stdout] 113 | | }; [INFO] [stdout] 114 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `suffix_chars` [INFO] [stdout] --> src/bin/generate_contrafold_params.rs:118:11 [INFO] [stdout] | [INFO] [stdout] 118 | let suffix_chars = suffix.chars().collect::>(); [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_suffix_chars` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/bin/generate_contrafold_params.rs:14:72 [INFO] [stdout] | [INFO] [stdout] 14 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 14 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | ^^^^^ [INFO] [stdout] help: or use std::panic::panic_any instead [INFO] [stdout] | [INFO] [stdout] 14 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `INIT_BL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:10:7 [INFO] [stdout] | [INFO] [stdout] 10 | let INIT_BL_DELTA_FES: Vec = [ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_bl_delta_fes` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `THREE_PRIME_DE_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:17:11 [INFO] [stdout] | [INFO] [stdout] 17 | let mut THREE_PRIME_DE_DELTA_FES: DeDeltaFes = [[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `three_prime_de_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `FIVE_PRIME_DE_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:35:11 [INFO] [stdout] | [INFO] [stdout] 35 | let mut FIVE_PRIME_DE_DELTA_FES = [[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `five_prime_de_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `INIT_HL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:53:11 [INFO] [stdout] | [INFO] [stdout] 53 | let mut INIT_HL_DELTA_FES: Vec = vec![0., 0., 0., 5.4, 5.6, 5.7, 5.4, 6.0, 5.5, 6.4].iter().map(|&x| {scale(x)}).collect(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_hl_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `INIT_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:60:7 [INFO] [stdout] | [INFO] [stdout] 60 | let INIT_IL_DELTA_FES: Vec = vec![ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `TWO_VS_3_IL_TM_BONUS_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:66:11 [INFO] [stdout] | [INFO] [stdout] 66 | let mut TWO_VS_3_IL_TM_BONUS_DELTA_FES = [[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_3_il_tm_bonus_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `OTHER_IL_TM_BONUS_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:71:11 [INFO] [stdout] | [INFO] [stdout] 71 | let mut OTHER_IL_TM_BONUS_DELTA_FES = [[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `other_il_tm_bonus_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ONE_VS_1_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:76:11 [INFO] [stdout] | [INFO] [stdout] 76 | let mut ONE_VS_1_IL_DELTA_FES = [[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_1_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ONE_VS_2_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:269:11 [INFO] [stdout] | [INFO] [stdout] 269 | let mut ONE_VS_2_IL_DELTA_FES = [[[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES... [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_2_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `TWO_VS_2_IL_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1002:11 [INFO] [stdout] | [INFO] [stdout] 1002 | let mut TWO_VS_2_IL_DELTA_FES = [[[[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASE... [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_2_il_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `STACK_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1623:11 [INFO] [stdout] | [INFO] [stdout] 1623 | let mut STACK_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `stack_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `HL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1641:11 [INFO] [stdout] | [INFO] [stdout] 1641 | let mut HL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `hl_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `IL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1678:11 [INFO] [stdout] | [INFO] [stdout] 1678 | let mut IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `il_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ONE_VS_MANY_IL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1715:11 [INFO] [stdout] | [INFO] [stdout] 1715 | let mut ONE_VS_MANY_IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_many_il_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `TWO_VS_3_IL_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1752:11 [INFO] [stdout] | [INFO] [stdout] 1752 | let mut TWO_VS_3_IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_3_il_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `ML_TM_DELTA_FES` should have a snake case name [INFO] [stdout] --> src/bin/generate_turner_params.rs:1789:11 [INFO] [stdout] | [INFO] [stdout] 1789 | let mut ML_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `ml_tm_delta_fes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 16 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:87:1 [INFO] [stdout] | [INFO] [stdout] 87 | / lazy_static! { [INFO] [stdout] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stdout] 89 | | [ [INFO] [stdout] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stdout] ... | [INFO] [stdout] 113 | | }; [INFO] [stdout] 114 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:87:1 [INFO] [stdout] | [INFO] [stdout] 87 | / lazy_static! { [INFO] [stdout] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stdout] 89 | | [ [INFO] [stdout] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stdout] ... | [INFO] [stdout] 113 | | }; [INFO] [stdout] 114 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 22.52s [INFO] running `Command { std: "docker" "inspect" "b43c66a4ad29dd6553eff96e55397a474c627f8867d654d54965ff2314fef16d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b43c66a4ad29dd6553eff96e55397a474c627f8867d654d54965ff2314fef16d", kill_on_drop: false }` [INFO] [stdout] b43c66a4ad29dd6553eff96e55397a474c627f8867d654d54965ff2314fef16d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 80e26321c24cab717839bf12b19f261e1b887799714a196446887b9d337bdf74 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "80e26321c24cab717839bf12b19f261e1b887799714a196446887b9d337bdf74", kill_on_drop: false }` [INFO] [stderr] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stderr] --> src/utils.rs:87:1 [INFO] [stderr] | [INFO] [stderr] 87 | / lazy_static! { [INFO] [stderr] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stderr] 89 | | [ [INFO] [stderr] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stderr] ... | [INFO] [stderr] 113 | | }; [INFO] [stderr] 114 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stderr] --> src/utils.rs:87:1 [INFO] [stderr] | [INFO] [stderr] 87 | / lazy_static! { [INFO] [stderr] 88 | | pub static ref SPECIAL_HL_DELTA_FES: SpecialHlDeltaFes = { [INFO] [stderr] 89 | | [ [INFO] [stderr] 90 | | (vec![C,A,A,C,G], scale(6.8)), [INFO] [stderr] ... | [INFO] [stderr] 113 | | }; [INFO] [stderr] 114 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: `rna-ss-params` (lib) generated 2 warnings [INFO] [stderr] warning: `rna-ss-params` (lib test) generated 2 warnings (2 duplicates) [INFO] [stderr] warning: variable `INIT_BL_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:10:7 [INFO] [stderr] | [INFO] [stderr] 10 | let INIT_BL_DELTA_FES: Vec = [ [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_bl_delta_fes` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable `THREE_PRIME_DE_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:17:11 [INFO] [stderr] | [INFO] [stderr] 17 | let mut THREE_PRIME_DE_DELTA_FES: DeDeltaFes = [[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `three_prime_de_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `FIVE_PRIME_DE_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:35:11 [INFO] [stderr] | [INFO] [stderr] 35 | let mut FIVE_PRIME_DE_DELTA_FES = [[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `five_prime_de_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `INIT_HL_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:53:11 [INFO] [stderr] | [INFO] [stderr] 53 | let mut INIT_HL_DELTA_FES: Vec = vec![0., 0., 0., 5.4, 5.6, 5.7, 5.4, 6.0, 5.5, 6.4].iter().map(|&x| {scale(x)}).collect(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_hl_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `INIT_IL_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:60:7 [INFO] [stderr] | [INFO] [stderr] 60 | let INIT_IL_DELTA_FES: Vec = vec![ [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `init_il_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `TWO_VS_3_IL_TM_BONUS_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:66:11 [INFO] [stderr] | [INFO] [stderr] 66 | let mut TWO_VS_3_IL_TM_BONUS_DELTA_FES = [[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_3_il_tm_bonus_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `OTHER_IL_TM_BONUS_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:71:11 [INFO] [stderr] | [INFO] [stderr] 71 | let mut OTHER_IL_TM_BONUS_DELTA_FES = [[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `other_il_tm_bonus_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `ONE_VS_1_IL_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:76:11 [INFO] [stderr] | [INFO] [stderr] 76 | let mut ONE_VS_1_IL_DELTA_FES = [[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_1_il_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `ONE_VS_2_IL_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:269:11 [INFO] [stderr] | [INFO] [stderr] 269 | let mut ONE_VS_2_IL_DELTA_FES = [[[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES... [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_2_il_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `TWO_VS_2_IL_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1002:11 [INFO] [stderr] | [INFO] [stderr] 1002 | let mut TWO_VS_2_IL_DELTA_FES = [[[[[[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASE... [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_2_il_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `STACK_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1623:11 [INFO] [stderr] | [INFO] [stderr] 1623 | let mut STACK_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `stack_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `HL_TM_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1641:11 [INFO] [stderr] | [INFO] [stderr] 1641 | let mut HL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `hl_tm_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `IL_TM_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1678:11 [INFO] [stderr] | [INFO] [stderr] 1678 | let mut IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `il_tm_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `ONE_VS_MANY_IL_TM_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1715:11 [INFO] [stderr] | [INFO] [stderr] 1715 | let mut ONE_VS_MANY_IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `one_vs_many_il_tm_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `TWO_VS_3_IL_TM_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1752:11 [INFO] [stderr] | [INFO] [stderr] 1752 | let mut TWO_VS_3_IL_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `two_vs_3_il_tm_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: variable `ML_TM_DELTA_FES` should have a snake case name [INFO] [stderr] --> src/bin/generate_turner_params.rs:1789:11 [INFO] [stderr] | [INFO] [stderr] 1789 | let mut ML_TM_DELTA_FES = [[[[NEG_INF; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; NUM_OF_BASES]; [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `ml_tm_delta_fes` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `suffix_chars` [INFO] [stderr] --> src/bin/generate_contrafold_params.rs:118:11 [INFO] [stderr] | [INFO] [stderr] 118 | let suffix_chars = suffix.chars().collect::>(); [INFO] [stderr] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_suffix_chars` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/bin/generate_contrafold_params.rs:14:72 [INFO] [stderr] | [INFO] [stderr] 14 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] help: add a "{}" format string to Display the message [INFO] [stderr] | [INFO] [stderr] 14 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stderr] | ^^^^^ [INFO] [stderr] help: or use std::panic::panic_any instead [INFO] [stderr] | [INFO] [stderr] 14 | Err(failure) => {print_program_usage(&program_name, &opts); std::panic::panic_any(failure.to_string())} [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `rna-ss-params` (bin "generate_turner_params" test) generated 16 warnings [INFO] [stderr] warning: `rna-ss-params` (bin "generate_contrafold_params" test) generated 2 warnings [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rna_ss_params-dc6b683496d40561) [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/generate_contrafold_params-5594159cd54ad3ec) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/generate_turner_params-6f4fc1160f7006d3) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests rna_ss_params [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "80e26321c24cab717839bf12b19f261e1b887799714a196446887b9d337bdf74", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80e26321c24cab717839bf12b19f261e1b887799714a196446887b9d337bdf74", kill_on_drop: false }` [INFO] [stdout] 80e26321c24cab717839bf12b19f261e1b887799714a196446887b9d337bdf74