[INFO] fetching crate noodles-sam 0.2.2...
[INFO] testing noodles-sam-0.2.2 against 1.55.0 for beta-1.56-1
[INFO] extracting crate noodles-sam 0.2.2 into /workspace/builds/worker-60/source
[INFO] validating manifest of crates.io crate noodles-sam 0.2.2 on toolchain 1.55.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate noodles-sam 0.2.2
[INFO] finished tweaking crates.io crate noodles-sam 0.2.2
[INFO] tweaked toml for crates.io crate noodles-sam 0.2.2 written to /workspace/builds/worker-60/source/Cargo.toml
[INFO] crate crates.io crate noodles-sam 0.2.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] cdec9abbcff25192dbfcdbebb9b7d157a8e477b5fbab17f45cd6e0e996b66819
[INFO] running `Command { std: "docker" "start" "-a" "cdec9abbcff25192dbfcdbebb9b7d157a8e477b5fbab17f45cd6e0e996b66819", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "cdec9abbcff25192dbfcdbebb9b7d157a8e477b5fbab17f45cd6e0e996b66819", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cdec9abbcff25192dbfcdbebb9b7d157a8e477b5fbab17f45cd6e0e996b66819", kill_on_drop: false }`
[INFO] [stdout] cdec9abbcff25192dbfcdbebb9b7d157a8e477b5fbab17f45cd6e0e996b66819
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 377855108b769589a5c34e5f5d287ac80b62891c55ff35ac1866e1269819a99a
[INFO] running `Command { std: "docker" "start" "-a" "377855108b769589a5c34e5f5d287ac80b62891c55ff35ac1866e1269819a99a", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling libc v0.2.99
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling hashbrown v0.11.2
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling flate2 v1.0.20
[INFO] [stderr]    Compiling noodles-bgzf v0.4.0
[INFO] [stderr]    Compiling noodles-sam v0.2.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 6.89s
[INFO] running `Command { std: "docker" "inspect" "377855108b769589a5c34e5f5d287ac80b62891c55ff35ac1866e1269819a99a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "377855108b769589a5c34e5f5d287ac80b62891c55ff35ac1866e1269819a99a", kill_on_drop: false }`
[INFO] [stdout] 377855108b769589a5c34e5f5d287ac80b62891c55ff35ac1866e1269819a99a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4056a78d769a2c82a2367c7518fc6e43af6f0ff7ebb741312b2a21caed0aa267
[INFO] running `Command { std: "docker" "start" "-a" "4056a78d769a2c82a2367c7518fc6e43af6f0ff7ebb741312b2a21caed0aa267", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling noodles-sam v0.2.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 4.87s
[INFO] running `Command { std: "docker" "inspect" "4056a78d769a2c82a2367c7518fc6e43af6f0ff7ebb741312b2a21caed0aa267", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4056a78d769a2c82a2367c7518fc6e43af6f0ff7ebb741312b2a21caed0aa267", kill_on_drop: false }`
[INFO] [stdout] 4056a78d769a2c82a2367c7518fc6e43af6f0ff7ebb741312b2a21caed0aa267
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-60/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 3791fd0f80a216ebaef20cd4faf432604d70294cb37a92fa3ce5861eb12654d1
[INFO] running `Command { std: "docker" "start" "-a" "3791fd0f80a216ebaef20cd4faf432604d70294cb37a92fa3ce5861eb12654d1", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.03s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/noodles_sam-d068c0d4f305bfc4)
[INFO] [stdout] 
[INFO] [stdout] running 127 tests
[INFO] [stdout] test header::builder::tests::test_default ... ok
[INFO] [stdout] test header::builder::tests::test_build ... ok
[INFO] [stdout] test header::header::group_order::tests::test_from_str ... ok
[INFO] [stdout] test header::header::group_order::tests::test_default ... ok
[INFO] [stdout] test header::header::group_order::tests::test_fmt ... ok
[INFO] [stdout] test header::header::sort_order::tests::test_default ... ok
[INFO] [stdout] test header::header::sort_order::tests::test_fmt ... ok
[INFO] [stdout] test header::header::subsort_order::tests::test_fmt ... ok
[INFO] [stdout] test header::header::sort_order::tests::test_from_str ... ok
[INFO] [stdout] test header::header::subsort_order::tests::test_from_str ... ok
[INFO] [stdout] test header::header::tag::tests::test_fmt ... ok
[INFO] [stdout] test header::header::tag::tests::test_from_str ... ok
[INFO] [stdout] test header::header::tests::test_default ... ok
[INFO] [stdout] test header::header::tests::test_fmt ... ok
[INFO] [stdout] test header::header::tests::test_try_from_record_for_header_with_invalid_record ... ok
[INFO] [stdout] test header::header::tests::test_try_from_record_for_header_with_no_version ... ok
[INFO] [stdout] test header::header::version::tests::test_default ... ok
[INFO] [stdout] test header::header::version::tests::test_fmt ... ok
[INFO] [stdout] test header::header::version::tests::test_from_str ... ok
[INFO] [stdout] test header::program::tag::tests::test_fmt ... ok
[INFO] [stdout] test header::program::tag::tests::test_from_str ... ok
[INFO] [stdout] test header::program::tests::test_fmt ... ok
[INFO] [stdout] test header::program::tests::test_try_from_record_for_program_with_invalid_record ... ok
[INFO] [stdout] test header::read_group::platform::tests::test_fmt ... ok
[INFO] [stdout] test header::program::tests::test_try_from_record_for_program_with_no_id ... ok
[INFO] [stdout] test header::read_group::platform::tests::test_from_str ... ok
[INFO] [stdout] test header::read_group::tag::tests::test_fmt ... ok
[INFO] [stdout] test header::read_group::tag::tests::test_from_str ... ok
[INFO] [stdout] test header::read_group::tests::test_fmt ... ok
[INFO] [stdout] test header::read_group::tests::test_try_from_record_for_read_group_with_invalid_platform ... ok
[INFO] [stdout] test header::read_group::tests::test_try_from_record_for_read_group_with_invalid_predicted_median_insert_size ... ok
[INFO] [stdout] test header::read_group::tests::test_try_from_record_for_read_group_with_invalid_record ... ok
[INFO] [stdout] test header::read_group::tests::test_try_from_record_for_read_group_with_no_id ... ok
[INFO] [stdout] test header::record::kind::tests::test_from_str ... ok
[INFO] [stdout] test header::reference_sequence::alternative_locus::tests::test_fmt ... ok
[INFO] [stdout] test header::record::value::tests::test_try_from_iter ... ok
[INFO] [stdout] test header::record::tests::test_from_str ... ok
[INFO] [stdout] test header::reference_sequence::alternative_locus::tests::test_from_str ... ok
[INFO] [stdout] test header::reference_sequence::alternative_names::tests::test_fmt ... ok
[INFO] [stdout] test header::reference_sequence::md5_checksum::tests::test_fmt ... ok
[INFO] [stdout] test header::reference_sequence::alternative_names::tests::test_from_str ... ok
[INFO] [stdout] test header::reference_sequence::builder::tests::test_build ... ok
[INFO] [stdout] test header::reference_sequence::md5_checksum::tests::test_from_md5_checksum_for_u8_array ... ok
[INFO] [stdout] test header::reference_sequence::md5_checksum::tests::test_from_u8_array_for_md5_checksum ... ok
[INFO] [stdout] test header::reference_sequence::md5_checksum::tests::test_parse ... ok
[INFO] [stdout] test header::reference_sequence::molecule_topology::tests::test_default ... ok
[INFO] [stdout] test header::reference_sequence::molecule_topology::tests::test_fmt ... ok
[INFO] [stdout] test header::reference_sequence::molecule_topology::tests::test_from_str ... ok
[INFO] [stdout] test header::reference_sequence::tag::tests::test_fmt ... ok
[INFO] [stdout] test header::reference_sequence::tag::tests::test_from_str ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_fmt ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_new ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_try_from_record_for_reference_sequence_with_invalid_name ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_try_from_record_for_reference_sequence_with_invalid_length ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_try_from_record_for_reference_sequence_with_invalid_record ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_try_from_record_for_reference_sequence_with_missing_name ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_try_from_record_for_reference_sequence_with_missing_name_and_length ... ok
[INFO] [stdout] test header::reference_sequence::tests::test_try_from_record_for_reference_sequence_with_missing_length ... ok
[INFO] [stdout] test header::tests::test_fmt ... ok
[INFO] [stdout] test header::tests::test_from_str ... ok
[INFO] [stdout] test header::tests::test_from_str_with_duplicate_program_ids ... ok
[INFO] [stdout] test header::tests::test_from_str_with_empty_input ... ok
[INFO] [stdout] test header::tests::test_from_str_with_duplicate_read_group_ids ... ok
[INFO] [stdout] test header::tests::test_from_str_with_duplicate_reference_sequence_names ... ok
[INFO] [stdout] test reader::tests::test_read_header_with_multiple_buffer_fills ... ok
[INFO] [stdout] test header::tests::test_from_str_with_multiple_hd ... ok
[INFO] [stdout] test reader::tests::test_read_header_with_no_header ... ok
[INFO] [stdout] test header::tests::test_from_str_without_hd ... ok
[INFO] [stdout] test reader::tests::test_read_header_with_no_records ... ok
[INFO] [stdout] test record::builder::tests::test_build_with_quality_scores_length_mismatch ... ok
[INFO] [stdout] test record::builder::tests::test_build ... ok
[INFO] [stdout] test record::builder::tests::test_default ... ok
[INFO] [stdout] test record::cigar::op::kind::tests::test_fmt ... ok
[INFO] [stdout] test record::cigar::op::kind::tests::test_from_kind_for_char ... ok
[INFO] [stdout] test record::cigar::op::kind::tests::test_from_str ... ok
[INFO] [stdout] test record::cigar::op::tests::test_fmt ... ok
[INFO] [stdout] test record::cigar::op::tests::test_from_str ... ok
[INFO] [stdout] test record::cigar::tests::test_fmt ... ok
[INFO] [stdout] test record::cigar::tests::test_fmt_when_cigar_has_no_ops ... ok
[INFO] [stdout] test record::cigar::tests::test_from_str ... ok
[INFO] [stdout] test record::cigar::tests::test_is_empty ... ok
[INFO] [stdout] test record::data::field::tag::tests::test_fmt ... ok
[INFO] [stdout] test record::data::field::tests::test_fmt ... ok
[INFO] [stdout] test record::data::field::value::subtype::tests::test_fmt ... ok
[INFO] [stdout] test record::data::field::tag::tests::test_from_str ... ok
[INFO] [stdout] test record::data::field::value::subtype::tests::test_from_str ... ok
[INFO] [stdout] test record::data::field::value::subtype::tests::test_from_subtype_for_char ... ok
[INFO] [stdout] test record::data::field::value::tests::test_fmt ... ok
[INFO] [stdout] test record::data::field::value::tests::test_subtype ... ok
[INFO] [stdout] test record::data::field::value::tests::test_ty ... ok
[INFO] [stdout] test record::data::field::value::ty::tests::test_from_str ... ok
[INFO] [stdout] test record::data::field::value::ty::tests::test_fmt ... ok
[INFO] [stdout] test record::data::field::value::tests::test_from_str ... ok
[INFO] [stdout] test record::data::field::value::ty::tests::test_from_type_for_char ... ok
[INFO] [stdout] test record::data::tests::test_fmt ... ok
[INFO] [stdout] test record::data::tests::test_from_str ... ok
[INFO] [stdout] test record::field::tests::test_fmt ... ok
[INFO] [stdout] test record::flags::tests::test_contains ... ok
[INFO] [stdout] test record::flags::tests::test_default ... ok
[INFO] [stdout] test record::flags::tests::test_from_flags_for_u16 ... ok
[INFO] [stdout] test record::flags::tests::test_from_u16_for_flags ... ok
[INFO] [stdout] test record::mapping_quality::tests::test_from_mapping_quality_for_u8 ... ok
[INFO] [stdout] test record::mapping_quality::tests::test_from_u8_for_mapping_quality ... ok
[INFO] [stdout] test record::position::tests::test_from_position_for_i32 ... ok
[INFO] [stdout] test record::position::tests::test_from_str ... ok
[INFO] [stdout] test record::position::tests::test_try_from_i32_for_position ... ok
[INFO] [stdout] test record::quality_scores::score::tests::test_from_score_for_char ... ok
[INFO] [stdout] test record::quality_scores::score::tests::test_from_score_for_u8 ... ok
[INFO] [stdout] test record::quality_scores::score::tests::test_try_from_char_for_score ... ok
[INFO] [stdout] test record::quality_scores::score::tests::test_try_from_u8_for_score ... ok
[INFO] [stdout] test record::quality_scores::tests::test_fmt ... ok
[INFO] [stdout] test record::quality_scores::tests::test_from_str ... ok
[INFO] [stdout] test record::quality_scores::tests::test_is_empty ... ok
[INFO] [stdout] test record::quality_scores::tests::test_len ... ok
[INFO] [stdout] test record::read_name::tests::test_fmt ... ok
[INFO] [stdout] test record::read_name::tests::test_from_str ... ok
[INFO] [stdout] test record::reference_sequence_name::tests::test_fmt ... ok
[INFO] [stdout] test record::reference_sequence_name::tests::test_from_str ... ok
[INFO] [stdout] test record::sequence::tests::test_fmt ... ok
[INFO] [stdout] test record::sequence::base::tests::test_try_from_char_for_base ... ok
[INFO] [stdout] test record::sequence::tests::test_from_str ... ok
[INFO] [stdout] test record::tests::test_fmt ... ok
[INFO] [stdout] test record::tests::test_fmt_with_data ... ok
[INFO] [stdout] test record::tests::test_from_str_with_invalid_position ... ok
[INFO] [stdout] test record::tests::test_from_str_with_quality_scores_length_mismatch ... ok
[INFO] [stdout] test record::tests::test_from_str_with_sequence_length_mismatch ... ok
[INFO] [stdout] test writer::tests::test_write_record_with_data ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 127 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests noodles-sam
[INFO] [stdout] 
[INFO] [stdout] running 215 tests
[INFO] [stderr] error: test failed, to rerun pass '--doc'
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustdoc --edition=2018 --crate-type lib --crate-name noodles_sam --test /opt/rustwide/workdir/src/lib.rs -L dependency=/opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern bitflags=/opt/rustwide/target/debug/deps/libbitflags-f947290fec4feb2c.rlib --extern indexmap=/opt/rustwide/target/debug/deps/libindexmap-c11af052310ee5ab.rlib --extern noodles_bgzf=/opt/rustwide/target/debug/deps/libnoodles_bgzf-8fad2583acbb2d60.rlib --extern noodles_sam=/opt/rustwide/target/debug/deps/libnoodles_sam-7286c8d590d47951.rlib -C embed-bitcode=no --error-format human` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "3791fd0f80a216ebaef20cd4faf432604d70294cb37a92fa3ce5861eb12654d1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3791fd0f80a216ebaef20cd4faf432604d70294cb37a92fa3ce5861eb12654d1", kill_on_drop: false }`
[INFO] [stdout] 3791fd0f80a216ebaef20cd4faf432604d70294cb37a92fa3ce5861eb12654d1