[INFO] fetching crate msbwt2 0.1.0... [INFO] testing msbwt2-0.1.0 against 1.55.0 for beta-1.56-1 [INFO] extracting crate msbwt2 0.1.0 into /workspace/builds/worker-35/source [INFO] validating manifest of crates.io crate msbwt2 0.1.0 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate msbwt2 0.1.0 [INFO] finished tweaking crates.io crate msbwt2 0.1.0 [INFO] tweaked toml for crates.io crate msbwt2 0.1.0 written to /workspace/builds/worker-35/source/Cargo.toml [INFO] crate crates.io crate msbwt2 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4272bbbf2c121a8c9385370be1507ede547b7255c0aa566270cb6f6d23389465 [INFO] running `Command { std: "docker" "start" "-a" "4272bbbf2c121a8c9385370be1507ede547b7255c0aa566270cb6f6d23389465", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4272bbbf2c121a8c9385370be1507ede547b7255c0aa566270cb6f6d23389465", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4272bbbf2c121a8c9385370be1507ede547b7255c0aa566270cb6f6d23389465", kill_on_drop: false }` [INFO] [stdout] 4272bbbf2c121a8c9385370be1507ede547b7255c0aa566270cb6f6d23389465 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] beb706ad2d7ee5a76dc708a156fe0c9c93ba01a2135ad719dabfa4cb7ee0329a [INFO] running `Command { std: "docker" "start" "-a" "beb706ad2d7ee5a76dc708a156fe0c9c93ba01a2135ad719dabfa4cb7ee0329a", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libc v0.2.94 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling serde_json v1.0.67 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling exitcode v1.1.2 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling env_logger v0.9.0 [INFO] [stderr] Compiling msbwt2 v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 12.72s [INFO] running `Command { std: "docker" "inspect" "beb706ad2d7ee5a76dc708a156fe0c9c93ba01a2135ad719dabfa4cb7ee0329a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "beb706ad2d7ee5a76dc708a156fe0c9c93ba01a2135ad719dabfa4cb7ee0329a", kill_on_drop: false }` [INFO] [stdout] beb706ad2d7ee5a76dc708a156fe0c9c93ba01a2135ad719dabfa4cb7ee0329a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 55b164816c996db985176e038d56e3a0ee5563486d255e8f1e5bd7774a06aa7f [INFO] running `Command { std: "docker" "start" "-a" "55b164816c996db985176e038d56e3a0ee5563486d255e8f1e5bd7774a06aa7f", kill_on_drop: false }` [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Compiling msbwt2 v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.58s [INFO] running `Command { std: "docker" "inspect" "55b164816c996db985176e038d56e3a0ee5563486d255e8f1e5bd7774a06aa7f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "55b164816c996db985176e038d56e3a0ee5563486d255e8f1e5bd7774a06aa7f", kill_on_drop: false }` [INFO] [stdout] 55b164816c996db985176e038d56e3a0ee5563486d255e8f1e5bd7774a06aa7f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-35/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 6cc59743560468ac485a791630fce02be0ee3ffb80670f68afc94389f68fa145 [INFO] running `Command { std: "docker" "start" "-a" "6cc59743560468ac485a791630fce02be0ee3ffb80670f68afc94389f68fa145", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.52s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/msbwt2-08d5a1a7c7a593cb) [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test bwt_converter::tests::test_convert_to_vec ... ok [INFO] [stdout] test bwt_converter::tests::test_bwt_conversion ... ok [INFO] [stdout] test bwt_converter::tests::test_newline ... ok [INFO] [stdout] test bwt_util::tests::test_basic ... ok [INFO] [stdout] test bwt_util::tests::test_cycle_breaker ... ok [INFO] [stdout] test bwt_util::tests::test_diff_len ... ok [INFO] [stdout] test rle_bwt::tests::test_constrain_range ... ok [INFO] [stdout] test rle_bwt::tests::test_fmindex ... ok [INFO] [stdout] test rle_bwt::tests::test_count_kmer ... ok [INFO] [stdout] test string_util::tests::test_convert_itos ... ok [INFO] [stdout] test string_util::tests::test_reverse_complement_i ... ok [INFO] [stdout] test string_util::tests::test_convert_stoi ... ok [INFO] [stdout] test string_util::tests::test_simple_index ... ok [INFO] [stdout] test rle_bwt::tests::test_load_rlebwt_from_npy ... ok [INFO] [stdout] test bwt_converter::tests::test_save_bwt_numpy ... ok [INFO] [stdout] test bwt_converter::tests::test_compression ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 16 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/msbwt_convert-9a06292412182486) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests msbwt2 [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::new (line 231) ... ok [INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::with_bin_power (line 243) ... ok [INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::get_total_size (line 79) ... ok [INFO] [stdout] test src/string_util.rs - string_util::convert_stoi (line 56) ... ok [INFO] [stdout] test src/string_util.rs - string_util::convert_itos (line 73) ... ok [INFO] [stdout] test src/bwt_converter.rs - bwt_converter::convert_to_vec (line 19) ... ok [INFO] [stdout] test src/string_util.rs - string_util::reverse_complement_i (line 38) ... ok [INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::load_numpy_file (line 49) ... ok [INFO] [stdout] test src/bwt_util.rs - bwt_util::naive_bwt (line 7) ... ok [INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::get_symbol_count (line 64) ... ok [INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::load_vector (line 33) ... ok [INFO] [stdout] test src/lib.rs - (line 6) ... ok [INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::count_kmer (line 105) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.87s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "6cc59743560468ac485a791630fce02be0ee3ffb80670f68afc94389f68fa145", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6cc59743560468ac485a791630fce02be0ee3ffb80670f68afc94389f68fa145", kill_on_drop: false }` [INFO] [stdout] 6cc59743560468ac485a791630fce02be0ee3ffb80670f68afc94389f68fa145