[INFO] fetching crate kmer-papa 0.1.1... [INFO] testing kmer-papa-0.1.1 against 1.55.0 for beta-1.56-1 [INFO] extracting crate kmer-papa 0.1.1 into /workspace/builds/worker-56/source [INFO] validating manifest of crates.io crate kmer-papa 0.1.1 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate kmer-papa 0.1.1 [INFO] finished tweaking crates.io crate kmer-papa 0.1.1 [INFO] tweaked toml for crates.io crate kmer-papa 0.1.1 written to /workspace/builds/worker-56/source/Cargo.toml [INFO] crate crates.io crate kmer-papa 0.1.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded serde_repr v0.1.6 [INFO] [stderr] Downloaded thiserror v1.0.20 [INFO] [stderr] Downloaded hermit-abi v0.1.14 [INFO] [stderr] Downloaded bstr v0.2.13 [INFO] [stderr] Downloaded anyhow v1.0.32 [INFO] [stderr] Downloaded mutexpect v0.2.0 [INFO] [stderr] Downloaded csv v1.1.3 [INFO] [stderr] Downloaded pattern_partition_prediction v0.1.0 [INFO] [stderr] Downloaded twobit v0.1.0 [INFO] [stderr] Downloaded thiserror-impl v1.0.20 [INFO] [stderr] Downloaded tabfile v0.2.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a3c5cb90333d004151fec17a5855d5e3083a5f4455b60b1969eed49c35c22520 [INFO] running `Command { std: "docker" "start" "-a" "a3c5cb90333d004151fec17a5855d5e3083a5f4455b60b1969eed49c35c22520", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a3c5cb90333d004151fec17a5855d5e3083a5f4455b60b1969eed49c35c22520", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a3c5cb90333d004151fec17a5855d5e3083a5f4455b60b1969eed49c35c22520", kill_on_drop: false }` [INFO] [stdout] a3c5cb90333d004151fec17a5855d5e3083a5f4455b60b1969eed49c35c22520 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 577334a80f3ff9f6ba1b951b92d32cfec85b8a81d951679493fe9bddc8c4135c [INFO] running `Command { std: "docker" "start" "-a" "577334a80f3ff9f6ba1b951b92d32cfec85b8a81d951679493fe9bddc8c4135c", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.36 [INFO] [stderr] Compiling libc v0.2.71 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling anyhow v1.0.32 [INFO] [stderr] Compiling tabfile v0.2.1 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.8 [INFO] [stderr] Compiling twobit v0.1.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling miniz_oxide v0.4.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling pattern_partition_prediction v0.1.0 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling flate2 v1.0.16 [INFO] [stderr] Compiling clap v2.33.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling thiserror-impl v1.0.20 [INFO] [stderr] Compiling serde_repr v0.1.6 [INFO] [stderr] Compiling thiserror v1.0.20 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling mutexpect v0.2.0 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling kmer-papa v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 41.39s [INFO] running `Command { std: "docker" "inspect" "577334a80f3ff9f6ba1b951b92d32cfec85b8a81d951679493fe9bddc8c4135c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "577334a80f3ff9f6ba1b951b92d32cfec85b8a81d951679493fe9bddc8c4135c", kill_on_drop: false }` [INFO] [stdout] 577334a80f3ff9f6ba1b951b92d32cfec85b8a81d951679493fe9bddc8c4135c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d36bf1d322bdbb94f78d543d70358b2fc34d0a4d8f2cf8ce818e9196c6a87a0a [INFO] running `Command { std: "docker" "start" "-a" "d36bf1d322bdbb94f78d543d70358b2fc34d0a4d8f2cf8ce818e9196c6a87a0a", kill_on_drop: false }` [INFO] [stderr] Compiling kmer-papa v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.79s [INFO] running `Command { std: "docker" "inspect" "d36bf1d322bdbb94f78d543d70358b2fc34d0a4d8f2cf8ce818e9196c6a87a0a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d36bf1d322bdbb94f78d543d70358b2fc34d0a4d8f2cf8ce818e9196c6a87a0a", kill_on_drop: false }` [INFO] [stdout] d36bf1d322bdbb94f78d543d70358b2fc34d0a4d8f2cf8ce818e9196c6a87a0a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-56/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 423a780631b647045d6af3982aad725eba110f87ca54e5cf8d7662e0cef881af [INFO] running `Command { std: "docker" "start" "-a" "423a780631b647045d6af3982aad725eba110f87ca54e5cf8d7662e0cef881af", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.33s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/kmer_papa-c972d50f43869089) [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test counts::tests::test_p_values ... ok [INFO] [stdout] test transform::tests::test_region_file_io ... ok [INFO] [stdout] test transform::tests::test_gff3_io ... ok [INFO] [stdout] test enumerate::tests::test_possible_mutations_io ... ok [INFO] [stdout] test expect::tests::test_expected_mutations_io ... ok [INFO] [stdout] test observed::tests::test_observed_mutations_io ... ok [INFO] [stdout] test sample::tests::test_sampled_mutations_io ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "423a780631b647045d6af3982aad725eba110f87ca54e5cf8d7662e0cef881af", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "423a780631b647045d6af3982aad725eba110f87ca54e5cf8d7662e0cef881af", kill_on_drop: false }` [INFO] [stdout] 423a780631b647045d6af3982aad725eba110f87ca54e5cf8d7662e0cef881af