[INFO] fetching crate hdf5 0.7.1... [INFO] testing hdf5-0.7.1 against 1.55.0 for beta-1.56-1 [INFO] extracting crate hdf5 0.7.1 into /workspace/builds/worker-40/source [INFO] validating manifest of crates.io crate hdf5 0.7.1 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5 0.7.1 [INFO] finished tweaking crates.io crate hdf5 0.7.1 [INFO] tweaked toml for crates.io crate hdf5 0.7.1 written to /workspace/builds/worker-40/source/Cargo.toml [INFO] crate crates.io crate hdf5 0.7.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-40/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-40/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f8f06d7c914d7267c3957ea45d40804fac46e4bb4922e27dbda5656836e55258 [INFO] running `Command { std: "docker" "start" "-a" "f8f06d7c914d7267c3957ea45d40804fac46e4bb4922e27dbda5656836e55258", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f8f06d7c914d7267c3957ea45d40804fac46e4bb4922e27dbda5656836e55258", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f8f06d7c914d7267c3957ea45d40804fac46e4bb4922e27dbda5656836e55258", kill_on_drop: false }` [INFO] [stdout] f8f06d7c914d7267c3957ea45d40804fac46e4bb4922e27dbda5656836e55258 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-40/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-40/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 81556885cd21bff198a0fc6c0ec25d32f4ada9e46a2910d3044482434d6b7e5e [INFO] running `Command { std: "docker" "start" "-a" "81556885cd21bff198a0fc6c0ec25d32f4ada9e46a2910d3044482434d6b7e5e", kill_on_drop: false }` [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling libc v0.2.74 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.38 [INFO] [stderr] Compiling smallvec v1.4.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling ascii v1.0.0 [INFO] [stderr] Compiling hdf5 v0.7.1 (/opt/rustwide/workdir) [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling instant v0.1.9 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling lock_api v0.4.2 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling parking_lot_core v0.8.2 [INFO] [stderr] Compiling hdf5-types v0.7.1 [INFO] [stderr] Compiling parking_lot v0.11.1 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling hdf5-sys v0.7.1 [INFO] [stderr] Compiling hdf5-derive v0.7.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-cec71567ad0f84b6/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5603e3c07060 - std::backtrace_rs::backtrace::libunwind::trace::ha0ad43e8a952bfe7 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x5603e3c07060 - std::backtrace_rs::backtrace::trace_unsynchronized::h6830419c0c4130dc [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5603e3c07060 - std::sys_common::backtrace::_print_fmt::h8f3516631ffa1ef5 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5603e3c07060 - ::fmt::he1640d5f0d93f618 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x5603e3c2559c - core::fmt::write::h88012e1f01caeebf [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x5603e3c044b5 - std::io::Write::write_fmt::h360fa85b30182555 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/io/mod.rs:1665:15 [INFO] [stderr] 6: 0x5603e3c090cb - std::sys_common::backtrace::_print::ha1f00492f406a015 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5603e3c090cb - std::sys_common::backtrace::print::hd54561b13feb6af3 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5603e3c090cb - std::panicking::default_hook::{{closure}}::h84fe124cd0864662 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x5603e3c08ba1 - std::panicking::default_hook::h5a8e74a76ce290a7 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x5603e3c09794 - std::panicking::rust_panic_with_hook::h67c812a4fe9d4c91 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x5603e3a2f293 - std::panicking::begin_panic::{{closure}}::h53042fcaad55a476 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x5603e3a2f019 - std::sys_common::backtrace::__rust_end_short_backtrace::hed479618107dfb6b [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x5603e3a2f1c9 - std::panicking::begin_panic::h78c788c69030a369 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x5603e3a04d87 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h4d71fbf2d52bce0a [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] 15: 0x5603e3a065ab - build_script_build::main::h4f4fc9fee84c95b9 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:647:9 [INFO] [stderr] 16: 0x5603e3a09f1b - core::ops::function::FnOnce::call_once::hfd9b8a66fbf76116 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x5603e3a10e3e - std::sys_common::backtrace::__rust_begin_short_backtrace::h4ebbbb9f0c119587 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x5603e3a10051 - std::rt::lang_start::{{closure}}::h3ca8a076d09bb9e7 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x5603e3c09c9a - core::ops::function::impls:: for &F>::call_once::ha9408abe89f69dc4 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x5603e3c09c9a - std::panicking::try::do_call::h5b0cc9e9102acb65 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x5603e3c09c9a - std::panicking::try::hddc7f8229138b3ba [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x5603e3c09c9a - std::panic::catch_unwind::hfa401ff8bab2986e [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x5603e3c09c9a - std::rt::lang_start_internal::{{closure}}::h8163422320d11405 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x5603e3c09c9a - std::panicking::try::do_call::hc742cc7bb4f0fb20 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 25: 0x5603e3c09c9a - std::panicking::try::ha37d8d2dd1acf7d3 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 26: 0x5603e3c09c9a - std::panic::catch_unwind::h8a5381d5ecf437bc [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stderr] 27: 0x5603e3c09c9a - std::rt::lang_start_internal::h7e2cee8c90d4a4d3 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x5603e3a10020 - std::rt::lang_start::h0418ea5405b1a2dd [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x5603e3a07a9c - main [INFO] [stderr] 30: 0x7fc5e7a360b3 - __libc_start_main [INFO] [stderr] 31: 0x5603e39fff0e - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "81556885cd21bff198a0fc6c0ec25d32f4ada9e46a2910d3044482434d6b7e5e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "81556885cd21bff198a0fc6c0ec25d32f4ada9e46a2910d3044482434d6b7e5e", kill_on_drop: false }` [INFO] [stdout] 81556885cd21bff198a0fc6c0ec25d32f4ada9e46a2910d3044482434d6b7e5e