[INFO] fetching crate global-supertrees 0.1.0... [INFO] testing global-supertrees-0.1.0 against 1.55.0 for beta-1.56-1 [INFO] extracting crate global-supertrees 0.1.0 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate global-supertrees 0.1.0 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate global-supertrees 0.1.0 [INFO] finished tweaking crates.io crate global-supertrees 0.1.0 [INFO] tweaked toml for crates.io crate global-supertrees 0.1.0 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] eeac07805967c1f0663a3201ed813b96a63e339cde7d166aca6a24f7e657ec04 [INFO] running `Command { std: "docker" "start" "-a" "eeac07805967c1f0663a3201ed813b96a63e339cde7d166aca6a24f7e657ec04", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "eeac07805967c1f0663a3201ed813b96a63e339cde7d166aca6a24f7e657ec04", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "eeac07805967c1f0663a3201ed813b96a63e339cde7d166aca6a24f7e657ec04", kill_on_drop: false }` [INFO] [stdout] eeac07805967c1f0663a3201ed813b96a63e339cde7d166aca6a24f7e657ec04 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4613596038c0d75ca041f9083fc88becbf32640bc13483b8b24f3e43092978df [INFO] running `Command { std: "docker" "start" "-a" "4613596038c0d75ca041f9083fc88becbf32640bc13483b8b24f3e43092978df", kill_on_drop: false }` [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:54:92 [INFO] [stdout] | [INFO] [stdout] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:61:82 [INFO] [stdout] | [INFO] [stdout] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/tree_merging.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `trees` [INFO] [stdout] --> src/main.rs:98:9 [INFO] [stdout] | [INFO] [stdout] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | let distance_matrices: Vec = [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `merge_distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:102:4 [INFO] [stdout] | [INFO] [stdout] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 8.36s [INFO] running `Command { std: "docker" "inspect" "4613596038c0d75ca041f9083fc88becbf32640bc13483b8b24f3e43092978df", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4613596038c0d75ca041f9083fc88becbf32640bc13483b8b24f3e43092978df", kill_on_drop: false }` [INFO] [stdout] 4613596038c0d75ca041f9083fc88becbf32640bc13483b8b24f3e43092978df [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 69760b18a96299d840772f1ae6115804471c0e67ac6422fe94e3985d739ce325 [INFO] running `Command { std: "docker" "start" "-a" "69760b18a96299d840772f1ae6115804471c0e67ac6422fe94e3985d739ce325", kill_on_drop: false }` [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:54:92 [INFO] [stdout] | [INFO] [stdout] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:61:82 [INFO] [stdout] | [INFO] [stdout] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see issue #80165 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/tree_merging.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `trees` [INFO] [stdout] --> src/main.rs:98:9 [INFO] [stdout] | [INFO] [stdout] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | let distance_matrices: Vec = [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `merge_distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:102:4 [INFO] [stdout] | [INFO] [stdout] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.08s [INFO] running `Command { std: "docker" "inspect" "69760b18a96299d840772f1ae6115804471c0e67ac6422fe94e3985d739ce325", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "69760b18a96299d840772f1ae6115804471c0e67ac6422fe94e3985d739ce325", kill_on_drop: false }` [INFO] [stdout] 69760b18a96299d840772f1ae6115804471c0e67ac6422fe94e3985d739ce325 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 07f19929639e4969fffc59f3c1cd3539783375827634ec90031dda5e65674045 [INFO] running `Command { std: "docker" "start" "-a" "07f19929639e4969fffc59f3c1cd3539783375827634ec90031dda5e65674045", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] running 16 tests [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see issue #80165 [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see issue #80165 [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: `global-supertrees` (bin "global-supertrees" test) generated 6 warnings [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.04s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/global_supertrees-1188865cf6245ae6) [INFO] [stdout] test tests::tests::test_find_first_zero ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok [INFO] [stdout] test tests::tests::test_get_levels_from_root ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok [INFO] [stdout] test tests::tests::test_find_first_common_ancestor ... ok [INFO] [stdout] test tests::tests::test_load_tree_file ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok [INFO] [stdout] test tests::tests::test_to_dot ... ok [INFO] [stdout] test tests::tests::test_merge_organisms ... FAILED [INFO] [stdout] test tests::tests::test_batch_id_tax_mapping ... FAILED [INFO] [stdout] test tests::tests::test_to_distance_matrix_simple ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium_nested ... ok [INFO] [stdout] test tests::tests::test_get_partial_tree ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium ... ok [INFO] [stdout] test tests::tests::test_tree_merging ... ok [INFO] [stdout] test tests::tests::test_neighbour_joining ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_organisms stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_organisms' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:34 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b1f90b24a0 - std::backtrace_rs::backtrace::libunwind::trace::ha0ad43e8a952bfe7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55b1f90b24a0 - std::backtrace_rs::backtrace::trace_unsynchronized::h6830419c0c4130dc [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b1f90b24a0 - std::sys_common::backtrace::_print_fmt::h8f3516631ffa1ef5 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b1f90b24a0 - ::fmt::he1640d5f0d93f618 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b1f90d697c - core::fmt::write::h88012e1f01caeebf [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stdout] 5: 0x55b1f90af265 - std::io::Write::write_fmt::h7728c39ea5632753 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/io/mod.rs:1665:15 [INFO] [stdout] 6: 0x55b1f90b467b - std::sys_common::backtrace::_print::ha1f00492f406a015 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55b1f90b467b - std::sys_common::backtrace::print::hd54561b13feb6af3 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55b1f90b467b - std::panicking::default_hook::{{closure}}::h84fe124cd0864662 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55b1f90b418c - std::panicking::default_hook::h5a8e74a76ce290a7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55b1f90b4d44 - std::panicking::rust_panic_with_hook::h67c812a4fe9d4c91 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x55b1f90b4827 - std::panicking::begin_panic_handler::{{closure}}::h33f9c1b96af300d7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x55b1f90b299c - std::sys_common::backtrace::__rust_end_short_backtrace::h51bae64be5921f0e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55b1f90b4789 - rust_begin_unwind [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x55b1f8d778c1 - core::panicking::panic_fmt::h12a3a3c256485fca [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55b1f8d779b3 - core::result::unwrap_failed::h2d8d0952e3250de9 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/result.rs:1599:5 [INFO] [stdout] 16: 0x55b1f8db21b0 - core::result::Result::expect::hfd2d7a5c9fb31310 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/result.rs:1241:23 [INFO] [stdout] 17: 0x55b1f8ddf918 - global_supertrees::uniprot::load_mapping_file::h4bf2945f59166b87 [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:34:13 [INFO] [stdout] 18: 0x55b1f8dd4faa - global_supertrees::tests::tests::test_merge_organisms::h795b44e3517223dc [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:237:26 [INFO] [stdout] 19: 0x55b1f8dd4f5a - global_supertrees::tests::tests::test_merge_organisms::{{closure}}::hab3eb35511d6947f [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:235:5 [INFO] [stdout] 20: 0x55b1f8e2243e - core::ops::function::FnOnce::call_once::h3bc89bf19d1cde1a [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55b1f8e761a3 - core::ops::function::FnOnce::call_once::h5aba9a5d361d6c79 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x55b1f8e761a3 - test::__rust_begin_short_backtrace::h705bb53b2b1d45e6 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:578:5 [INFO] [stdout] 23: 0x55b1f8e74c58 - as core::ops::function::FnOnce>::call_once::ha20f614d7c0b2b6d [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 24: 0x55b1f8e74c58 - as core::ops::function::FnOnce<()>>::call_once::hf02f19eeb64ceabd [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:347:9 [INFO] [stdout] 25: 0x55b1f8e74c58 - std::panicking::try::do_call::h4bfab65eb3b4b036 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 26: 0x55b1f8e74c58 - std::panicking::try::h6613a46a6d2b6f88 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 27: 0x55b1f8e74c58 - std::panic::catch_unwind::h9f07b17b60991273 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stdout] 28: 0x55b1f8e74c58 - test::run_test_in_process::hc38797eecf07854f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:601:18 [INFO] [stdout] 29: 0x55b1f8e74c58 - test::run_test::run_test_inner::{{closure}}::hac209db8bce0fd77 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:493:39 [INFO] [stdout] 30: 0x55b1f8e433ed - test::run_test::run_test_inner::{{closure}}::h4aefdd4b4a423e20 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:520:37 [INFO] [stdout] 31: 0x55b1f8e433ed - std::sys_common::backtrace::__rust_begin_short_backtrace::h652c9e2663704700 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x55b1f8e47bc8 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hd84fd5e0b5b1f45f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/thread/mod.rs:476:17 [INFO] [stdout] 33: 0x55b1f8e47bc8 - as core::ops::function::FnOnce<()>>::call_once::he23556962a2ae14b [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:347:9 [INFO] [stdout] 34: 0x55b1f8e47bc8 - std::panicking::try::do_call::h67d4f93e1fbaa5f9 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 35: 0x55b1f8e47bc8 - std::panicking::try::h396886e678db815e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 36: 0x55b1f8e47bc8 - std::panic::catch_unwind::hc1d64dcecf0a00e0 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stdout] 37: 0x55b1f8e47bc8 - std::thread::Builder::spawn_unchecked::{{closure}}::hc2644cf33cb61d8e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/thread/mod.rs:475:30 [INFO] [stdout] 38: 0x55b1f8e47bc8 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h4473c2c77b66963f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x55b1f90b9a17 - as core::ops::function::FnOnce>::call_once::h6bff7798948b1075 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 40: 0x55b1f90b9a17 - as core::ops::function::FnOnce>::call_once::hc2d25ac38f6b2342 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 41: 0x55b1f90b9a17 - std::sys::unix::thread::Thread::new::thread_start::hbba5bc368baac205 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys/unix/thread.rs:74:17 [INFO] [stdout] 42: 0x7fcc5b5bf609 - start_thread [INFO] [stdout] 43: 0x7fcc5b391293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_batch_id_tax_mapping stdout ---- [INFO] [stdout] thread 'tests::tests::test_batch_id_tax_mapping' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:34 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b1f90b24a0 - std::backtrace_rs::backtrace::libunwind::trace::ha0ad43e8a952bfe7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55b1f90b24a0 - std::backtrace_rs::backtrace::trace_unsynchronized::h6830419c0c4130dc [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b1f90b24a0 - std::sys_common::backtrace::_print_fmt::h8f3516631ffa1ef5 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b1f90b24a0 - ::fmt::he1640d5f0d93f618 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b1f90d697c - core::fmt::write::h88012e1f01caeebf [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stdout] 5: 0x55b1f90af265 - std::io::Write::write_fmt::h7728c39ea5632753 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/io/mod.rs:1665:15 [INFO] [stdout] 6: 0x55b1f90b467b - std::sys_common::backtrace::_print::ha1f00492f406a015 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55b1f90b467b - std::sys_common::backtrace::print::hd54561b13feb6af3 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55b1f90b467b - std::panicking::default_hook::{{closure}}::h84fe124cd0864662 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55b1f90b418c - std::panicking::default_hook::h5a8e74a76ce290a7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55b1f90b4d44 - std::panicking::rust_panic_with_hook::h67c812a4fe9d4c91 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:622:17 [INFO] [stdout] 11: 0x55b1f90b4827 - std::panicking::begin_panic_handler::{{closure}}::h33f9c1b96af300d7 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:519:13 [INFO] [stdout] 12: 0x55b1f90b299c - std::sys_common::backtrace::__rust_end_short_backtrace::h51bae64be5921f0e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55b1f90b4789 - rust_begin_unwind [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:515:5 [INFO] [stdout] 14: 0x55b1f8d778c1 - core::panicking::panic_fmt::h12a3a3c256485fca [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55b1f8d779b3 - core::result::unwrap_failed::h2d8d0952e3250de9 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/result.rs:1599:5 [INFO] [stdout] 16: 0x55b1f8db21b0 - core::result::Result::expect::hfd2d7a5c9fb31310 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/result.rs:1241:23 [INFO] [stdout] 17: 0x55b1f8ddf918 - global_supertrees::uniprot::load_mapping_file::h4bf2945f59166b87 [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:34:13 [INFO] [stdout] 18: 0x55b1f8dd4d3a - global_supertrees::tests::tests::test_batch_id_tax_mapping::h1f9f42283979d281 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:230:26 [INFO] [stdout] 19: 0x55b1f8dd4bea - global_supertrees::tests::tests::test_batch_id_tax_mapping::{{closure}}::hf9f4fd8f0c119a8b [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:227:5 [INFO] [stdout] 20: 0x55b1f8e2272e - core::ops::function::FnOnce::call_once::he3918dd108ef84fa [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55b1f8e761a3 - core::ops::function::FnOnce::call_once::h5aba9a5d361d6c79 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x55b1f8e761a3 - test::__rust_begin_short_backtrace::h705bb53b2b1d45e6 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:578:5 [INFO] [stdout] 23: 0x55b1f8e74c58 - as core::ops::function::FnOnce>::call_once::ha20f614d7c0b2b6d [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 24: 0x55b1f8e74c58 - as core::ops::function::FnOnce<()>>::call_once::hf02f19eeb64ceabd [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:347:9 [INFO] [stdout] 25: 0x55b1f8e74c58 - std::panicking::try::do_call::h4bfab65eb3b4b036 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 26: 0x55b1f8e74c58 - std::panicking::try::h6613a46a6d2b6f88 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 27: 0x55b1f8e74c58 - std::panic::catch_unwind::h9f07b17b60991273 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stdout] 28: 0x55b1f8e74c58 - test::run_test_in_process::hc38797eecf07854f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:601:18 [INFO] [stdout] 29: 0x55b1f8e74c58 - test::run_test::run_test_inner::{{closure}}::hac209db8bce0fd77 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:493:39 [INFO] [stdout] 30: 0x55b1f8e433ed - test::run_test::run_test_inner::{{closure}}::h4aefdd4b4a423e20 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/test/src/lib.rs:520:37 [INFO] [stdout] 31: 0x55b1f8e433ed - std::sys_common::backtrace::__rust_begin_short_backtrace::h652c9e2663704700 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x55b1f8e47bc8 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hd84fd5e0b5b1f45f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/thread/mod.rs:476:17 [INFO] [stdout] 33: 0x55b1f8e47bc8 - as core::ops::function::FnOnce<()>>::call_once::he23556962a2ae14b [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:347:9 [INFO] [stdout] 34: 0x55b1f8e47bc8 - std::panicking::try::do_call::h67d4f93e1fbaa5f9 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stdout] 35: 0x55b1f8e47bc8 - std::panicking::try::h396886e678db815e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stdout] 36: 0x55b1f8e47bc8 - std::panic::catch_unwind::hc1d64dcecf0a00e0 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stdout] 37: 0x55b1f8e47bc8 - std::thread::Builder::spawn_unchecked::{{closure}}::hc2644cf33cb61d8e [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/thread/mod.rs:475:30 [INFO] [stdout] 38: 0x55b1f8e47bc8 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h4473c2c77b66963f [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x55b1f90b9a17 - as core::ops::function::FnOnce>::call_once::h6bff7798948b1075 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 40: 0x55b1f90b9a17 - as core::ops::function::FnOnce>::call_once::hc2d25ac38f6b2342 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/alloc/src/boxed.rs:1572:9 [INFO] [stdout] 41: 0x55b1f90b9a17 - std::sys::unix::thread::Thread::new::thread_start::hbba5bc368baac205 [INFO] [stdout] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys/unix/thread.rs:74:17 [INFO] [stdout] 42: 0x7fcc5b5bf609 - start_thread [INFO] [stdout] 43: 0x7fcc5b391293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::tests::test_batch_id_tax_mapping [INFO] [stdout] tests::tests::test_merge_organisms [INFO] [stdout] [INFO] [stdout] test result: FAILED. 14 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.56s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin global-supertrees' [INFO] running `Command { std: "docker" "inspect" "07f19929639e4969fffc59f3c1cd3539783375827634ec90031dda5e65674045", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "07f19929639e4969fffc59f3c1cd3539783375827634ec90031dda5e65674045", kill_on_drop: false }` [INFO] [stdout] 07f19929639e4969fffc59f3c1cd3539783375827634ec90031dda5e65674045