[INFO] fetching crate genome-graph 0.4.0... [INFO] testing genome-graph-0.4.0 against 1.55.0 for beta-1.56-1 [INFO] extracting crate genome-graph 0.4.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate genome-graph 0.4.0 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate genome-graph 0.4.0 [INFO] finished tweaking crates.io crate genome-graph 0.4.0 [INFO] tweaked toml for crates.io crate genome-graph 0.4.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 39db0887a97ea07dc5e542b28e68150b68befdcf00d0173893ad42ed1b8d385e [INFO] running `Command { std: "docker" "start" "-a" "39db0887a97ea07dc5e542b28e68150b68befdcf00d0173893ad42ed1b8d385e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "39db0887a97ea07dc5e542b28e68150b68befdcf00d0173893ad42ed1b8d385e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "39db0887a97ea07dc5e542b28e68150b68befdcf00d0173893ad42ed1b8d385e", kill_on_drop: false }` [INFO] [stdout] 39db0887a97ea07dc5e542b28e68150b68befdcf00d0173893ad42ed1b8d385e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c8e375692368068ef6288d9f043061f5728471a9c259febd4970ce04960a5ef1 [INFO] running `Command { std: "docker" "start" "-a" "c8e375692368068ef6288d9f043061f5728471a9c259febd4970ce04960a5ef1", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ref-cast v1.0.6 [INFO] [stderr] Compiling traitsequence v0.4.0 [INFO] [stderr] Compiling bitvector v0.1.5 [INFO] [stderr] Compiling funty v1.2.0 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling bio v0.37.1 [INFO] [stderr] Compiling strum v0.15.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling opaque_typedef v0.0.5 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling wyz v0.4.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling object v0.26.2 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling ref-cast-impl v1.0.6 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling strum_macros v0.21.1 [INFO] [stderr] Compiling bstr v0.2.16 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling matrixmultiply v0.3.1 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling bitvec v0.22.3 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling getset v0.1.1 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling approx v0.5.0 [INFO] [stderr] Compiling rand_distr v0.4.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling traitgraph v0.4.0 [INFO] [stderr] Compiling simba v0.5.1 [INFO] [stderr] Compiling ndarray v0.15.3 [INFO] [stderr] Compiling backtrace v0.3.61 [INFO] [stderr] Compiling bio-types v0.12.0 [INFO] [stderr] Compiling compact-genome v0.4.0 [INFO] [stderr] Compiling error-chain v0.12.4 [INFO] [stderr] Compiling strum_macros v0.15.0 [INFO] [stderr] Compiling opaque_typedef_macros v0.0.5 [INFO] [stderr] Compiling nalgebra v0.27.1 [INFO] [stderr] Compiling bigraph v0.4.0 [INFO] [stderr] Compiling statrs v0.15.0 [INFO] [stderr] Compiling genome-graph v0.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 47.74s [INFO] running `Command { std: "docker" "inspect" "c8e375692368068ef6288d9f043061f5728471a9c259febd4970ce04960a5ef1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c8e375692368068ef6288d9f043061f5728471a9c259febd4970ce04960a5ef1", kill_on_drop: false }` [INFO] [stdout] c8e375692368068ef6288d9f043061f5728471a9c259febd4970ce04960a5ef1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a163c7e14272d47544057f751286ac84df5b196b8cd8a029ae6cbd9b45c7c91f [INFO] running `Command { std: "docker" "start" "-a" "a163c7e14272d47544057f751286ac84df5b196b8cd8a029ae6cbd9b45c7c91f", kill_on_drop: false }` [INFO] [stderr] Compiling genome-graph v0.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.32s [INFO] running `Command { std: "docker" "inspect" "a163c7e14272d47544057f751286ac84df5b196b8cd8a029ae6cbd9b45c7c91f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a163c7e14272d47544057f751286ac84df5b196b8cd8a029ae6cbd9b45c7c91f", kill_on_drop: false }` [INFO] [stdout] a163c7e14272d47544057f751286ac84df5b196b8cd8a029ae6cbd9b45c7c91f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 82295eead15ac9b8d72479ecaa6341a220cc011771fe2d80661bc764f15d264c [INFO] running `Command { std: "docker" "start" "-a" "82295eead15ac9b8d72479ecaa6341a220cc011771fe2d80661bc764f15d264c", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/genome_graph-2c67d90662ffc19e) [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_forward_merge ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_all_loops ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_minus_plus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_multigraph ... ok [INFO] [stdout] test io::bcalm2::tests::test_node_read_write ... ok [INFO] [stdout] test io::gfa::tests::test_read_gfa_as_edge_centric_bigraph_simple ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_and_minus_plus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_self_loops ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests genome-graph [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "82295eead15ac9b8d72479ecaa6341a220cc011771fe2d80661bc764f15d264c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "82295eead15ac9b8d72479ecaa6341a220cc011771fe2d80661bc764f15d264c", kill_on_drop: false }` [INFO] [stdout] 82295eead15ac9b8d72479ecaa6341a220cc011771fe2d80661bc764f15d264c