[INFO] fetching crate gchemol 0.0.41...
[INFO] testing gchemol-0.0.41 against 1.55.0 for beta-1.56-1
[INFO] extracting crate gchemol 0.0.41 into /workspace/builds/worker-80/source
[INFO] validating manifest of crates.io crate gchemol 0.0.41 on toolchain 1.55.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate gchemol 0.0.41
[INFO] finished tweaking crates.io crate gchemol 0.0.41
[INFO] tweaked toml for crates.io crate gchemol 0.0.41 written to /workspace/builds/worker-80/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded gchemol-geometry v0.0.39
[INFO] [stderr]   Downloaded gchemol-readwrite v0.0.41
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 12ff6c67b79578c62794acaf4dd1d48a683eabd90c068eb9f6848d40d8619889
[INFO] running `Command { std: "docker" "start" "-a" "12ff6c67b79578c62794acaf4dd1d48a683eabd90c068eb9f6848d40d8619889", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "12ff6c67b79578c62794acaf4dd1d48a683eabd90c068eb9f6848d40d8619889", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "12ff6c67b79578c62794acaf4dd1d48a683eabd90c068eb9f6848d40d8619889", kill_on_drop: false }`
[INFO] [stdout] 12ff6c67b79578c62794acaf4dd1d48a683eabd90c068eb9f6848d40d8619889
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9324525b8abdea166531b71a3648ee37beb0d08c9b93acbcdc23236e959c3e43
[INFO] running `Command { std: "docker" "start" "-a" "9324525b8abdea166531b71a3648ee37beb0d08c9b93acbcdc23236e959c3e43", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling serde v1.0.130
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[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling generic-array v0.13.3
[INFO] [stderr]    Compiling unic-segment v0.9.0
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling pest_meta v2.1.3
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling tempfile v3.2.0
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling rand_distr v0.2.2
[INFO] [stderr]    Compiling pest_generator v2.1.3
[INFO] [stderr]    Compiling structopt-derive v0.4.16
[INFO] [stderr]    Compiling clap_derive v3.0.0-beta.4
[INFO] [stderr]    Compiling chrono v0.4.19
[INFO] [stderr]    Compiling pest_derive v2.1.0
[INFO] [stderr]    Compiling env_logger v0.9.0
[INFO] [stderr]    Compiling parse-zoneinfo v0.3.0
[INFO] [stderr]    Compiling globset v0.4.8
[INFO] [stderr]    Compiling ignore v0.4.18
[INFO] [stderr]    Compiling clap v3.0.0-beta.4
[INFO] [stderr]    Compiling structopt v0.3.23
[INFO] [stderr]    Compiling globwalk v0.8.1
[INFO] [stderr]    Compiling chrono-tz v0.5.3
[INFO] [stderr]    Compiling toml v0.5.8
[INFO] [stderr]    Compiling petgraph v0.5.1
[INFO] [stderr]    Compiling envy v0.4.2
[INFO] [stderr]    Compiling bimap v0.4.0
[INFO] [stderr]    Compiling alga v0.9.3
[INFO] [stderr]    Compiling handlebars v3.5.5
[INFO] [stderr]    Compiling gchemol-gut v0.1.7
[INFO] [stderr]    Compiling nalgebra v0.20.0
[INFO] [stderr]    Compiling gchemol-parser v0.2.1
[INFO] [stderr]    Compiling gchemol-graph v0.1.1
[INFO] [stderr]    Compiling tera v1.12.1
[INFO] [stderr]    Compiling vecfx v0.1.2
[INFO] [stderr]    Compiling gchemol-lattice v0.1.0
[INFO] [stderr]    Compiling octree v0.1.0
[INFO] [stderr]    Compiling gchemol-geometry v0.0.39
[INFO] [stderr]    Compiling gchemol-neighbors v0.1.0
[INFO] [stderr]    Compiling gchemol-core v0.0.42
[INFO] [stderr]    Compiling gchemol-readwrite v0.0.41
[INFO] [stderr]    Compiling gchemol v0.0.41 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 09s
[INFO] running `Command { std: "docker" "inspect" "9324525b8abdea166531b71a3648ee37beb0d08c9b93acbcdc23236e959c3e43", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9324525b8abdea166531b71a3648ee37beb0d08c9b93acbcdc23236e959c3e43", kill_on_drop: false }`
[INFO] [stdout] 9324525b8abdea166531b71a3648ee37beb0d08c9b93acbcdc23236e959c3e43
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 25de5c8ef2b3807409912d0afa77cfad352fc30b84a921c0f6156671b8632312
[INFO] running `Command { std: "docker" "start" "-a" "25de5c8ef2b3807409912d0afa77cfad352fc30b84a921c0f6156671b8632312", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling gchemol v0.0.41 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `gchemol::prelude::*`
[INFO] [stdout]  --> tests/molecule.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | use gchemol::prelude::*;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `mol`
[INFO] [stdout]   --> tests/io.rs:44:9
[INFO] [stdout]    |
[INFO] [stdout] 44 |     for mol in gchemol::io::read(&f).expect("read mol2") {
[INFO] [stdout]    |         ^^^ help: if this is intentional, prefix it with an underscore: `_mol`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 6.85s
[INFO] running `Command { std: "docker" "inspect" "25de5c8ef2b3807409912d0afa77cfad352fc30b84a921c0f6156671b8632312", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "25de5c8ef2b3807409912d0afa77cfad352fc30b84a921c0f6156671b8632312", kill_on_drop: false }`
[INFO] [stdout] 25de5c8ef2b3807409912d0afa77cfad352fc30b84a921c0f6156671b8632312
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 570a6cd6dc7e73d4228ca0a5f1042e4753314d3eecb3fdc99899554313b0a03b
[INFO] running `Command { std: "docker" "start" "-a" "570a6cd6dc7e73d4228ca0a5f1042e4753314d3eecb3fdc99899554313b0a03b", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `gchemol::prelude::*`
[INFO] [stderr]  --> tests/molecule.rs:3:5
[INFO] [stderr]   |
[INFO] [stderr] 3 | use gchemol::prelude::*;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `mol`
[INFO] [stderr]   --> tests/io.rs:44:9
[INFO] [stderr]    |
[INFO] [stderr] 44 |     for mol in gchemol::io::read(&f).expect("read mol2") {
[INFO] [stderr]    |         ^^^ help: if this is intentional, prefix it with an underscore: `_mol`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `gchemol` (test "molecule") generated 1 warning
[INFO] [stderr] warning: `gchemol` (test "io") generated 1 warning
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.17s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/gchemol-646e00582adc5fc7)
[INFO] [stdout] running 0 tests
[INFO] [stderr]      Running tests/crystal.rs (/opt/rustwide/target/debug/deps/crystal-360672ecf1b71e51)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test test_crystal ... ok
[INFO] [stderr]      Running tests/io.rs (/opt/rustwide/target/debug/deps/io-06ebad9926bcc489)
[INFO] [stdout] test test_supercell ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test io_from_file_to_file ... ok
[INFO] [stderr]      Running tests/molecule.rs (/opt/rustwide/target/debug/deps/molecule-2e86dff575837184)
[INFO] [stdout] test read_write_molecules ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.08s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test test_atom_data ... ok
[INFO] [stdout] test test_new_atom ... ok
[INFO] [stdout] test test_new_molecule ... ok
[INFO] [stdout] test test_molecule_properties ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests gchemol
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "570a6cd6dc7e73d4228ca0a5f1042e4753314d3eecb3fdc99899554313b0a03b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "570a6cd6dc7e73d4228ca0a5f1042e4753314d3eecb3fdc99899554313b0a03b", kill_on_drop: false }`
[INFO] [stdout] 570a6cd6dc7e73d4228ca0a5f1042e4753314d3eecb3fdc99899554313b0a03b