[INFO] cloning repository https://github.com/SavinaRoja/rustic_rosalind [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/SavinaRoja/rustic_rosalind" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSavinaRoja%2Frustic_rosalind", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSavinaRoja%2Frustic_rosalind'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 4981f284d5830224a7aa912f168e0d3825c9171f [INFO] testing SavinaRoja/rustic_rosalind against 1.55.0 for beta-1.56-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FSavinaRoja%2Frustic_rosalind" "/workspace/builds/worker-77/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-77/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/SavinaRoja/rustic_rosalind on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/SavinaRoja/rustic_rosalind [INFO] finished tweaking git repo https://github.com/SavinaRoja/rustic_rosalind [INFO] tweaked toml for git repo https://github.com/SavinaRoja/rustic_rosalind written to /workspace/builds/worker-77/source/Cargo.toml [INFO] crate git repo https://github.com/SavinaRoja/rustic_rosalind already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded snafu-derive v0.5.0 [INFO] [stderr] Downloaded snafu v0.5.0 [INFO] [stderr] Downloaded bytecount v0.6.0 [INFO] [stderr] Downloaded multimap v0.6.0 [INFO] [stderr] Downloaded bv v0.11.0 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded bio v0.30.0 [INFO] [stderr] Downloaded statrs v0.11.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2d4921fe2a3eff80e69b4df7e43b8eb9e72a93c2e8660959b38709bbe33ad6c4 [INFO] running `Command { std: "docker" "start" "-a" "2d4921fe2a3eff80e69b4df7e43b8eb9e72a93c2e8660959b38709bbe33ad6c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2d4921fe2a3eff80e69b4df7e43b8eb9e72a93c2e8660959b38709bbe33ad6c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2d4921fe2a3eff80e69b4df7e43b8eb9e72a93c2e8660959b38709bbe33ad6c4", kill_on_drop: false }` [INFO] [stdout] 2d4921fe2a3eff80e69b4df7e43b8eb9e72a93c2e8660959b38709bbe33ad6c4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f6b8a3115164a19659e480b94b4b3e77476e9c40ba16c27475e9f39a62ed327a [INFO] running `Command { std: "docker" "start" "-a" "f6b8a3115164a19659e480b94b4b3e77476e9c40ba16c27475e9f39a62ed327a", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Compiling libc v0.2.66 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling syn v1.0.11 [INFO] [stderr] Compiling rand_core v0.4.2 [INFO] [stderr] Compiling serde v1.0.103 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling byteorder v1.3.2 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling cc v1.0.48 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling unicode-width v0.1.7 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling bio v0.30.0 [INFO] [stderr] Compiling itoa v0.4.4 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling strum v0.16.0 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling fnv v1.0.6 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_jitter v0.1.4 [INFO] [stderr] Compiling bv v0.11.0 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling rand_hc v0.1.0 [INFO] [stderr] Compiling rand_isaac v0.1.1 [INFO] [stderr] Compiling rand_xorshift v0.1.1 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling num-traits v0.2.10 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling regex-automata v0.1.8 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling atty v0.2.13 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling backtrace v0.3.40 [INFO] [stderr] Compiling statrs v0.11.0 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling serde_derive v1.0.103 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling bstr v0.2.8 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling rosalind v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 55s [INFO] running `Command { std: "docker" "inspect" "f6b8a3115164a19659e480b94b4b3e77476e9c40ba16c27475e9f39a62ed327a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f6b8a3115164a19659e480b94b4b3e77476e9c40ba16c27475e9f39a62ed327a", kill_on_drop: false }` [INFO] [stdout] f6b8a3115164a19659e480b94b4b3e77476e9c40ba16c27475e9f39a62ed327a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5be4caea2acbc0d1566ceb96eb4d0292d7ba9190f20dea6be5e8a2de7d4183f2 [INFO] running `Command { std: "docker" "start" "-a" "5be4caea2acbc0d1566ceb96eb4d0292d7ba9190f20dea6be5e8a2de7d4183f2", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling rosalind v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.59s [INFO] running `Command { std: "docker" "inspect" "5be4caea2acbc0d1566ceb96eb4d0292d7ba9190f20dea6be5e8a2de7d4183f2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5be4caea2acbc0d1566ceb96eb4d0292d7ba9190f20dea6be5e8a2de7d4183f2", kill_on_drop: false }` [INFO] [stdout] 5be4caea2acbc0d1566ceb96eb4d0292d7ba9190f20dea6be5e8a2de7d4183f2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-77/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] a81559ae2962afe879cc78fcafbaa2075268f4d4bfd97ee9a8f5e5349be4aa09 [INFO] running `Command { std: "docker" "start" "-a" "a81559ae2962afe879cc78fcafbaa2075268f4d4bfd97ee9a8f5e5349be4aa09", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.27s [INFO] [stdout] running 33 tests [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rosalind-c3fbde5a3560a79a) [INFO] [stdout] test dna::tests::dna_empty ... ok [INFO] [stdout] test dna::tests::dna_one_of_each ... ok [INFO] [stdout] test fib::tests::fib_n_one_k_one ... ok [INFO] [stdout] test hamm::tests::hamm_full_dataset ... ok [INFO] [stdout] test prot::tests::prot_empty ... ok [INFO] [stdout] test fib::tests::fib_n_two_k_10 ... ok [INFO] [stdout] test fib::tests::fib_n_two_k_one ... ok [INFO] [stdout] test revc::tests::revc_empty ... ok [INFO] [stdout] test prot::tests::prot_two_na ... ok [INFO] [stdout] test revc::tests::revc_simple_complement ... ok [INFO] [stdout] test hamm::tests::hamm_simple_one ... ok [INFO] [stdout] test fib::tests::fib_n_one_k_ten ... ok [INFO] [stdout] test revc::tests::revc_self_reverse_complement ... ok [INFO] [stdout] test fib::tests::fib_n_twenty_nine_k_two ... ok [INFO] [stdout] test prot::tests::prot_early_termination ... ok [INFO] [stdout] test prot::tests::prot_one_codon ... ok [INFO] [stdout] test prot::tests::prot_short_sequence ... ok [INFO] [stdout] test hamm::tests::hamm_simple_zero ... ok [INFO] [stdout] test dna::tests::dna_none_with_noise ... ok [INFO] [stdout] test prob::tests::can_solve ... ok [INFO] [stdout] test dna::tests::dna_with_a_full_dataset ... ok [INFO] [stdout] test fib::tests::fib_n_five_k_three ... ok [INFO] [stdout] test dna::tests::dna_one_of_each_with_noise ... ok [INFO] [stdout] test prot::tests::prot_one_na ... ok [INFO] [stdout] test revc::tests::revc_with_a_full_dataset ... ok [INFO] [stdout] test hamm::tests::hamm_empty ... ok [INFO] [stdout] test rna::tests::rna_empty ... ok [INFO] [stdout] test rna::tests::rna_minimal_action ... ok [INFO] [stdout] test rna::tests::rna_no_action ... ok [INFO] [stdout] test rna::tests::rna_with_a_full_dataset ... ok [INFO] [stdout] test rna::tests::rna_simple ... ok [INFO] [stdout] test subs::tests::new_problem ... ok [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rosalind-798fbfd31206a839) [INFO] [stdout] test hamm::tests::hamm_length_mismatch - should panic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 33 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests rosalind [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "a81559ae2962afe879cc78fcafbaa2075268f4d4bfd97ee9a8f5e5349be4aa09", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a81559ae2962afe879cc78fcafbaa2075268f4d4bfd97ee9a8f5e5349be4aa09", kill_on_drop: false }` [INFO] [stdout] a81559ae2962afe879cc78fcafbaa2075268f4d4bfd97ee9a8f5e5349be4aa09