[INFO] cloning repository https://github.com/38/pyd4 [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 163ae6a7bcd4b7a0141cbf089c86c59c599b30ce [INFO] testing 38/pyd4 against 1.55.0 for beta-1.56-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-9/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-9/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain 1.55.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/38/pyd4 [INFO] finished tweaking git repo https://github.com/38/pyd4 [INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.55.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pyo3-derive-backend v0.12.4 [INFO] [stderr] Downloaded d4-framefile v0.1.18 [INFO] [stderr] Downloaded pyo3cls v0.12.4 [INFO] [stderr] Downloaded pyo3 v0.12.4 [INFO] [stderr] Downloaded d4 v0.1.18 [INFO] [stderr] Downloaded d4-hts v0.1.18 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5abd3399a1674706559fd2dacd0bf44ebaa238135c2afef748fb0fad2260b35c [INFO] running `Command { std: "docker" "start" "-a" "5abd3399a1674706559fd2dacd0bf44ebaa238135c2afef748fb0fad2260b35c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5abd3399a1674706559fd2dacd0bf44ebaa238135c2afef748fb0fad2260b35c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5abd3399a1674706559fd2dacd0bf44ebaa238135c2afef748fb0fad2260b35c", kill_on_drop: false }` [INFO] [stdout] 5abd3399a1674706559fd2dacd0bf44ebaa238135c2afef748fb0fad2260b35c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:a89201d6b5b9fd45c15d5952ece0a0129e7e80cb26ec023fd59cf09bc26f1604" "/opt/rustwide/cargo-home/bin/cargo" "+1.55.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6ed7f5839c7c70b12c1b451b12f1372ce89f04a919f13e26b6b0a3a5b555ae34 [INFO] running `Command { std: "docker" "start" "-a" "6ed7f5839c7c70b12c1b451b12f1372ce89f04a919f13e26b6b0a3a5b555ae34", kill_on_drop: false }` [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling libc v0.2.99 [INFO] [stderr] Compiling proc-macro2 v1.0.28 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling syn v1.0.74 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling proc-macro-hack v0.5.19 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling serde v1.0.127 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling serde_derive v1.0.127 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling unindent v0.1.7 [INFO] [stderr] Compiling inventory v0.1.10 [INFO] [stderr] Compiling smallvec v1.6.1 [INFO] [stderr] Compiling serde_json v1.0.66 [INFO] [stderr] Compiling pyo3 v0.12.4 [INFO] [stderr] Compiling itoa v0.4.7 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling instant v0.1.10 [INFO] [stderr] Compiling lock_api v0.4.4 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling memmap v0.7.0 [INFO] [stderr] Compiling parking_lot_core v0.8.3 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling parking_lot v0.11.1 [INFO] [stderr] Compiling flate2 v1.0.20 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling d4-framefile v0.1.18 [INFO] [stderr] Compiling pyo3-derive-backend v0.12.4 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling inventory-impl v0.1.10 [INFO] [stderr] Compiling ghost v0.1.2 [INFO] [stderr] Compiling ctor v0.1.20 [INFO] [stderr] Compiling pyo3cls v0.12.4 [INFO] [stderr] Compiling indoc v0.3.6 [INFO] [stderr] Compiling d4-hts v0.1.18 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.1.18` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-36b2bad016d4df82/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-dc22a51a2000f1f2/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-dc22a51a2000f1f2/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.18/build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x563e9af2d460 - std::backtrace_rs::backtrace::libunwind::trace::ha0ad43e8a952bfe7 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x563e9af2d460 - std::backtrace_rs::backtrace::trace_unsynchronized::h6830419c0c4130dc [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x563e9af2d460 - std::sys_common::backtrace::_print_fmt::h8f3516631ffa1ef5 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x563e9af2d460 - ::fmt::he1640d5f0d93f618 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x563e9af51f2c - core::fmt::write::h88012e1f01caeebf [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x563e9af2a235 - std::io::Write::write_fmt::h360fa85b30182555 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/io/mod.rs:1665:15 [INFO] [stderr] 6: 0x563e9af2f91b - std::sys_common::backtrace::_print::ha1f00492f406a015 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x563e9af2f91b - std::sys_common::backtrace::print::hd54561b13feb6af3 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x563e9af2f91b - std::panicking::default_hook::{{closure}}::h84fe124cd0864662 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x563e9af2f3f1 - std::panicking::default_hook::h5a8e74a76ce290a7 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x563e9af2ffe4 - std::panicking::rust_panic_with_hook::h67c812a4fe9d4c91 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x563e9af2fa97 - std::panicking::begin_panic_handler::{{closure}}::h33f9c1b96af300d7 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x563e9af2d95c - std::sys_common::backtrace::__rust_end_short_backtrace::h51bae64be5921f0e [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x563e9af2fa29 - rust_begin_unwind [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x563e9a9dd931 - core::panicking::panic_fmt::h12a3a3c256485fca [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x563e9a9dd87d - core::panicking::panic::h344f23ad26057b48 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x563e9a9dea3d - build_script_build::build_own_htslib::h133d6bc0e679fadd [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.18/build.rs:33:5 [INFO] [stderr] 17: 0x563e9a9dee9e - build_script_build::main::hbf1565082297f382 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.18/build.rs:65:9 [INFO] [stderr] 18: 0x563e9a9e058b - core::ops::function::FnOnce::call_once::h21b81e21021ba5ff [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x563e9a9dfcbe - std::sys_common::backtrace::__rust_begin_short_backtrace::h9e9982a8c9b9ab0d [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x563e9a9e04e1 - std::rt::lang_start::{{closure}}::hc9150825e9a194e6 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:63:18 [INFO] [stderr] 21: 0x563e9af305ea - core::ops::function::impls:: for &F>::call_once::ha9408abe89f69dc4 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x563e9af305ea - std::panicking::try::do_call::h5b0cc9e9102acb65 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x563e9af305ea - std::panicking::try::hddc7f8229138b3ba [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x563e9af305ea - std::panic::catch_unwind::hfa401ff8bab2986e [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stderr] 25: 0x563e9af305ea - std::rt::lang_start_internal::{{closure}}::h8163422320d11405 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:45:48 [INFO] [stderr] 26: 0x563e9af305ea - std::panicking::try::do_call::hc742cc7bb4f0fb20 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:401:40 [INFO] [stderr] 27: 0x563e9af305ea - std::panicking::try::ha37d8d2dd1acf7d3 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panicking.rs:365:19 [INFO] [stderr] 28: 0x563e9af305ea - std::panic::catch_unwind::h8a5381d5ecf437bc [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/panic.rs:434:14 [INFO] [stderr] 29: 0x563e9af305ea - std::rt::lang_start_internal::h7e2cee8c90d4a4d3 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:45:20 [INFO] [stderr] 30: 0x563e9a9e04b0 - std::rt::lang_start::he357bd478967a278 [INFO] [stderr] at /rustc/c8dfcfe046a7680554bf4eb612bad840e7631c4b/library/std/src/rt.rs:62:5 [INFO] [stderr] 31: 0x563e9a9df4ec - main [INFO] [stderr] 32: 0x7fc7b39350b3 - __libc_start_main [INFO] [stderr] 33: 0x563e9a9de12e - _start [INFO] [stderr] 34: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "6ed7f5839c7c70b12c1b451b12f1372ce89f04a919f13e26b6b0a3a5b555ae34", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6ed7f5839c7c70b12c1b451b12f1372ce89f04a919f13e26b6b0a3a5b555ae34", kill_on_drop: false }` [INFO] [stdout] 6ed7f5839c7c70b12c1b451b12f1372ce89f04a919f13e26b6b0a3a5b555ae34