[INFO] cloning repository https://github.com/chfi/rust-qtlreaper
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rust-qtlreaper" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8d650921ec4aec63c42068de58b91579228f57b1
[INFO] testing chfi/rust-qtlreaper against 1.54.0 for beta-1.55-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper" "/workspace/builds/worker-25/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-25/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/chfi/rust-qtlreaper on toolchain 1.54.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.54.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/chfi/rust-qtlreaper
[INFO] finished tweaking git repo https://github.com/chfi/rust-qtlreaper
[INFO] tweaked toml for git repo https://github.com/chfi/rust-qtlreaper written to /workspace/builds/worker-25/source/Cargo.toml
[INFO] crate git repo https://github.com/chfi/rust-qtlreaper already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.54.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+1.54.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 2dc38b4dbb7f937e64165d1ab895db4ccdf1defbc2ae682d9bf7f10574d63854
[INFO] running `Command { std: "docker" "start" "-a" "2dc38b4dbb7f937e64165d1ab895db4ccdf1defbc2ae682d9bf7f10574d63854", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2dc38b4dbb7f937e64165d1ab895db4ccdf1defbc2ae682d9bf7f10574d63854", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2dc38b4dbb7f937e64165d1ab895db4ccdf1defbc2ae682d9bf7f10574d63854", kill_on_drop: false }`
[INFO] [stdout] 2dc38b4dbb7f937e64165d1ab895db4ccdf1defbc2ae682d9bf7f10574d63854
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+1.54.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 08bf76dc0751d90706755b2b07509d27d9ebf52e9e3457919c8e2f530aec192d
[INFO] running `Command { std: "docker" "start" "-a" "08bf76dc0751d90706755b2b07509d27d9ebf52e9e3457919c8e2f530aec192d", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling autocfg v0.1.6
[INFO] [stderr]    Compiling libc v0.2.54
[INFO] [stderr]    Compiling rand_core v0.4.0
[INFO] [stderr]    Compiling syn v0.15.34
[INFO] [stderr]    Compiling arrayvec v0.4.10
[INFO] [stderr]    Compiling nodrop v0.1.13
[INFO] [stderr]    Compiling cfg-if v0.1.9
[INFO] [stderr]    Compiling memoffset v0.2.1
[INFO] [stderr]    Compiling scopeguard v0.3.3
[INFO] [stderr]    Compiling lazy_static v1.3.0
[INFO] [stderr]    Compiling rayon-core v1.4.1
[INFO] [stderr]    Compiling serde v1.0.91
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling ryu v0.2.8
[INFO] [stderr]    Compiling either v1.5.2
[INFO] [stderr]    Compiling unicode-segmentation v1.3.0
[INFO] [stderr]    Compiling rawpointer v0.1.0
[INFO] [stderr]    Compiling rayon v1.0.3
[INFO] [stderr]    Compiling bitflags v1.0.4
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling itoa v0.4.4
[INFO] [stderr]    Compiling quote v0.6.12
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling crossbeam-utils v0.2.2
[INFO] [stderr]    Compiling rand_core v0.3.1
[INFO] [stderr]    Compiling rand_jitter v0.1.4
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling num-traits v0.2.8
[INFO] [stderr]    Compiling rand_pcg v0.1.2
[INFO] [stderr]    Compiling rand_chacha v0.1.1
[INFO] [stderr]    Compiling num-complex v0.2.3
[INFO] [stderr]    Compiling rand v0.6.5
[INFO] [stderr]    Compiling rand_xorshift v0.1.1
[INFO] [stderr]    Compiling rand_hc v0.1.0
[INFO] [stderr]    Compiling rand_isaac v0.1.1
[INFO] [stderr]    Compiling num_cpus v1.10.0
[INFO] [stderr]    Compiling atty v0.2.11
[INFO] [stderr]    Compiling rand_os v0.1.3
[INFO] [stderr]    Compiling crossbeam-epoch v0.3.1
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling crossbeam-deque v0.2.0
[INFO] [stderr]    Compiling serde_derive v1.0.91
[INFO] [stderr]    Compiling structopt-derive v0.2.15
[INFO] [stderr]    Compiling structopt v0.2.15
[INFO] [stderr]    Compiling serde_json v1.0.39
[INFO] [stderr]    Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/lib.rs:5:22
[INFO] [stdout]   |
[INFO] [stdout] 5 | #[macro_use(s, azip, array)]
[INFO] [stdout]   |                      ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE`
[INFO] [stdout]  --> src/regression.rs:5:1
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function is never used: `regression_2n_variance`
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 50.46s
[INFO] running `Command { std: "docker" "inspect" "08bf76dc0751d90706755b2b07509d27d9ebf52e9e3457919c8e2f530aec192d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "08bf76dc0751d90706755b2b07509d27d9ebf52e9e3457919c8e2f530aec192d", kill_on_drop: false }`
[INFO] [stdout] 08bf76dc0751d90706755b2b07509d27d9ebf52e9e3457919c8e2f530aec192d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+1.54.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] bab5dbe9bebfbd242d0dc3b88ef4f800994613cf9d7e672706a8f991f52c82c1
[INFO] running `Command { std: "docker" "start" "-a" "bab5dbe9bebfbd242d0dc3b88ef4f800994613cf9d7e672706a8f991f52c82c1", kill_on_drop: false }`
[INFO] [stdout] warning: unused `#[macro_use]` import
[INFO] [stdout]  --> src/lib.rs:5:22
[INFO] [stdout]   |
[INFO] [stdout] 5 | #[macro_use(s, azip, array)]
[INFO] [stdout]   |                      ^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE`
[INFO] [stdout]  --> src/regression.rs:5:1
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function is never used: `regression_2n_variance`
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir)
[INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE`
[INFO] [stdout]  --> src/regression.rs:5:1
[INFO] [stdout]   |
[INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stdout]   | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function is never used: `regression_2n_variance`
[INFO] [stdout]    --> src/regression.rs:250:4
[INFO] [stdout]     |
[INFO] [stdout] 250 | fn regression_2n_variance(
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 10.09s
[INFO] running `Command { std: "docker" "inspect" "bab5dbe9bebfbd242d0dc3b88ef4f800994613cf9d7e672706a8f991f52c82c1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bab5dbe9bebfbd242d0dc3b88ef4f800994613cf9d7e672706a8f991f52c82c1", kill_on_drop: false }`
[INFO] [stdout] bab5dbe9bebfbd242d0dc3b88ef4f800994613cf9d7e672706a8f991f52c82c1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-25/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+1.54.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 5f2126f80690448f74e242b19717e46a7d55e0564ba2af2043a7f859181c5fec
[INFO] running `Command { std: "docker" "start" "-a" "5f2126f80690448f74e242b19717e46a7d55e0564ba2af2043a7f859181c5fec", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr] warning: unused `#[macro_use]` import
[INFO] [stderr]  --> src/lib.rs:5:22
[INFO] [stderr]   |
[INFO] [stderr] 5 | #[macro_use(s, azip, array)]
[INFO] [stderr]   |                      ^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: constant is never used: `PERMUTATION_TESTSIZE`
[INFO] [stderr]  --> src/regression.rs:5:1
[INFO] [stderr]   |
[INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stderr]   | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function is never used: `regression_2n_variance`
[INFO] [stderr]    --> src/regression.rs:250:4
[INFO] [stderr]     |
[INFO] [stderr] 250 | fn regression_2n_variance(
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr] warning: constant is never used: `PERMUTATION_TESTSIZE`
[INFO] [stderr]  --> src/regression.rs:5:1
[INFO] [stderr]   |
[INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000;
[INFO] [stderr]   | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function is never used: `regression_2n_variance`
[INFO] [stderr]    --> src/regression.rs:250:4
[INFO] [stderr]     |
[INFO] [stderr] 250 | fn regression_2n_variance(
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: 2 warnings emitted
[INFO] [stderr] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 4.54s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/qtlreaper-33d6bf95996c934c)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test geneobject::tests::it_can_parse_header ... ok
[INFO] [stdout] test geneobject::tests::it_can_parse_metadata ... ok
[INFO] [stdout] test geneobject::tests::it_can_estimate_unknown_genotypes ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- geneobject::tests::it_can_estimate_unknown_genotypes stdout ----
[INFO] [stdout] thread 'geneobject::tests::it_can_estimate_unknown_genotypes' panicked at 'assertion failed: `(left == right)`
[INFO] [stdout]   left: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627406, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.32233300305265566, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`,
[INFO] [stdout]  right: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627405, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.3223330030526561, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`', src/geneobject.rs:895:9
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x558bf3515d00 - std::backtrace_rs::backtrace::libunwind::trace::h34055254b57d8e79
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5
[INFO] [stdout]    1:     0x558bf3515d00 - std::backtrace_rs::backtrace::trace_unsynchronized::h8f1e3fbd9afff6ec
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x558bf3515d00 - std::sys_common::backtrace::_print_fmt::h3a99a796b770c360
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys_common/backtrace.rs:67:5
[INFO] [stdout]    3:     0x558bf3515d00 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h32d1f94a80615d18
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys_common/backtrace.rs:46:22
[INFO] [stdout]    4:     0x558bf35384fc - core::fmt::write::h306731c068f7162c
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/core/src/fmt/mod.rs:1110:17
[INFO] [stdout]    5:     0x558bf3512c25 - std::io::Write::write_fmt::h87f19b0a2cd190bc
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/io/mod.rs:1588:15
[INFO] [stdout]    6:     0x558bf3517e6b - std::sys_common::backtrace::_print::h5abaa2601a852287
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys_common/backtrace.rs:49:5
[INFO] [stdout]    7:     0x558bf3517e6b - std::sys_common::backtrace::print::h8d81445442bb638f
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys_common/backtrace.rs:36:9
[INFO] [stdout]    8:     0x558bf3517e6b - std::panicking::default_hook::{{closure}}::hcfe804496a9fa747
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:208:50
[INFO] [stdout]    9:     0x558bf351797c - std::panicking::default_hook::hbea8e3ccf2ba8901
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:222:9
[INFO] [stdout]   10:     0x558bf3518534 - std::panicking::rust_panic_with_hook::h7ee9e1a2d0f8975a
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:622:17
[INFO] [stdout]   11:     0x558bf3518017 - std::panicking::begin_panic_handler::{{closure}}::h8ab3b4491718b2c7
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:519:13
[INFO] [stdout]   12:     0x558bf35161fc - std::sys_common::backtrace::__rust_end_short_backtrace::hd489062ffa586a9f
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys_common/backtrace.rs:141:18
[INFO] [stdout]   13:     0x558bf3517f79 - rust_begin_unwind
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:515:5
[INFO] [stdout]   14:     0x558bf347d651 - core::panicking::panic_fmt::hca6330e3e14086b4
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/core/src/panicking.rs:92:14
[INFO] [stdout]   15:     0x558bf3536e18 - core::panicking::assert_failed_inner::h33b45280069a80ed
[INFO] [stdout]   16:     0x558bf349907a - core::panicking::assert_failed::hff5f216f9b0411e2
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/core/src/panicking.rs:117:5
[INFO] [stdout]   17:     0x558bf34aeec0 - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::h061bfe7f538df412
[INFO] [stdout]                                at /opt/rustwide/workdir/src/geneobject.rs:895:9
[INFO] [stdout]   18:     0x558bf34ac98a - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::{{closure}}::h272537749a26d90c
[INFO] [stdout]                                at /opt/rustwide/workdir/src/geneobject.rs:808:5
[INFO] [stdout]   19:     0x558bf348558e - core::ops::function::FnOnce::call_once::h3c9f1e1cf14ba532
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/core/src/ops/function.rs:227:5
[INFO] [stdout]   20:     0x558bf34d7293 - core::ops::function::FnOnce::call_once::h152e7e439ff59e19
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/core/src/ops/function.rs:227:5
[INFO] [stdout]   21:     0x558bf34d7293 - test::__rust_begin_short_backtrace::h0908f3b1fdbb72ab
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/test/src/lib.rs:577:5
[INFO] [stdout]   22:     0x558bf34d5d50 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::hf6d2a51e5587546c
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/alloc/src/boxed.rs:1575:9
[INFO] [stdout]   23:     0x558bf34d5d50 - <std::panic::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h8af660f3a89ef593
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panic.rs:347:9
[INFO] [stdout]   24:     0x558bf34d5d50 - std::panicking::try::do_call::hd36aef60f84b6d36
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:401:40
[INFO] [stdout]   25:     0x558bf34d5d50 - std::panicking::try::h9932b4480e69817c
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:365:19
[INFO] [stdout]   26:     0x558bf34d5d50 - std::panic::catch_unwind::h6aa177099cfff5f8
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panic.rs:434:14
[INFO] [stdout]   27:     0x558bf34d5d50 - test::run_test_in_process::h5884d6f2d99e20c3
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/test/src/lib.rs:600:18
[INFO] [stdout]   28:     0x558bf34d5d50 - test::run_test::run_test_inner::{{closure}}::h6fdc58c6d5f5b6e3
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/test/src/lib.rs:492:39
[INFO] [stdout]   29:     0x558bf34af402 - test::run_test::run_test_inner::{{closure}}::h408365d67a78ade8
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/test/src/lib.rs:519:37
[INFO] [stdout]   30:     0x558bf34af402 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb560b77c4f701523
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys_common/backtrace.rs:125:18
[INFO] [stdout]   31:     0x558bf34b2fb8 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hf2e7831dad93c597
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/thread/mod.rs:481:17
[INFO] [stdout]   32:     0x558bf34b2fb8 - <std::panic::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::hd2e08783d8be4d02
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panic.rs:347:9
[INFO] [stdout]   33:     0x558bf34b2fb8 - std::panicking::try::do_call::h062597b7acfd6b82
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:401:40
[INFO] [stdout]   34:     0x558bf34b2fb8 - std::panicking::try::h0d7b79db04c14552
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panicking.rs:365:19
[INFO] [stdout]   35:     0x558bf34b2fb8 - std::panic::catch_unwind::hb01a0b5e7c8cd43b
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/panic.rs:434:14
[INFO] [stdout]   36:     0x558bf34b2fb8 - std::thread::Builder::spawn_unchecked::{{closure}}::h5bde48cc887e0d1e
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/thread/mod.rs:480:30
[INFO] [stdout]   37:     0x558bf34b2fb8 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h745ea30807a29e55
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/core/src/ops/function.rs:227:5
[INFO] [stdout]   38:     0x558bf351cff7 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h7ece6cfefaff1005
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/alloc/src/boxed.rs:1575:9
[INFO] [stdout]   39:     0x558bf351cff7 - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::hb8b48e55c21f193e
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/alloc/src/boxed.rs:1575:9
[INFO] [stdout]   40:     0x558bf351cff7 - std::sys::unix::thread::Thread::new::thread_start::h8c7c4450dba62914
[INFO] [stdout]                                at /rustc/a178d0322ce20e33eac124758e837cbd80a6f633/library/std/src/sys/unix/thread.rs:71:17
[INFO] [stdout]   41:     0x7f4fb9ff9609 - start_thread
[INFO] [stdout]   42:     0x7f4fb9dcb293 - clone
[INFO] [stdout]   43:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     geneobject::tests::it_can_estimate_unknown_genotypes
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 2 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.11s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass '--lib'
[INFO] running `Command { std: "docker" "inspect" "5f2126f80690448f74e242b19717e46a7d55e0564ba2af2043a7f859181c5fec", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5f2126f80690448f74e242b19717e46a7d55e0564ba2af2043a7f859181c5fec", kill_on_drop: false }`
[INFO] [stdout] 5f2126f80690448f74e242b19717e46a7d55e0564ba2af2043a7f859181c5fec
