[INFO] fetching crate rustynuc 0.3.0...
[INFO] testing rustynuc-0.3.0 against beta-2021-08-01 for beta-1.55-1
[INFO] extracting crate rustynuc 0.3.0 into /workspace/builds/worker-32/source
[INFO] validating manifest of crates.io crate rustynuc 0.3.0 on toolchain beta-2021-08-01
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate rustynuc 0.3.0
[INFO] finished tweaking crates.io crate rustynuc 0.3.0
[INFO] tweaked toml for crates.io crate rustynuc 0.3.0 written to /workspace/builds/worker-32/source/Cargo.toml
[INFO] crate crates.io crate rustynuc 0.3.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded derive-new v0.5.8
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded multimap v0.6.0
[INFO] [stderr]   Downloaded bio-types v0.7.0
[INFO] [stderr]   Downloaded predicates v1.0.5
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded hts-sys v1.10.3
[INFO] [stderr]   Downloaded niffler v2.2.0
[INFO] [stderr]   Downloaded fishers_exact v1.0.1
[INFO] [stderr]   Downloaded bio v0.30.1
[INFO] [stderr]   Downloaded rust-htslib v0.31.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 976b60fe08bf9475f8e2af55bbe9c90cb672d5ac2e7993aa3fe3145ca3ab7c76
[INFO] running `Command { std: "docker" "start" "-a" "976b60fe08bf9475f8e2af55bbe9c90cb672d5ac2e7993aa3fe3145ca3ab7c76", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "976b60fe08bf9475f8e2af55bbe9c90cb672d5ac2e7993aa3fe3145ca3ab7c76", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "976b60fe08bf9475f8e2af55bbe9c90cb672d5ac2e7993aa3fe3145ca3ab7c76", kill_on_drop: false }`
[INFO] [stdout] 976b60fe08bf9475f8e2af55bbe9c90cb672d5ac2e7993aa3fe3145ca3ab7c76
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fe336504db52e2dc63c218921c282b2a3639f67e4e091449b5e327d33fc57861
[INFO] running `Command { std: "docker" "start" "-a" "fe336504db52e2dc63c218921c282b2a3639f67e4e091449b5e327d33fc57861", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.24
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling libc v0.2.80
[INFO] [stderr]    Compiling syn v1.0.53
[INFO] [stderr]    Compiling serde_derive v1.0.118
[INFO] [stderr]    Compiling serde v1.0.118
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]    Compiling version_check v0.9.2
[INFO] [stderr]    Compiling getrandom v0.1.15
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling pkg-config v0.3.19
[INFO] [stderr]    Compiling const_fn v0.4.3
[INFO] [stderr]    Compiling matches v0.1.8
[INFO] [stderr]    Compiling tinyvec_macros v0.1.0
[INFO] [stderr]    Compiling unicode-segmentation v1.7.1
[INFO] [stderr]    Compiling regex-syntax v0.6.21
[INFO] [stderr]    Compiling scopeguard v1.1.0
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling rayon-core v1.9.0
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling adler v0.2.3
[INFO] [stderr]    Compiling either v1.6.1
[INFO] [stderr]    Compiling percent-encoding v2.1.0
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling ordermap v0.3.5
[INFO] [stderr]    Compiling bio v0.30.1
[INFO] [stderr]    Compiling fixedbitset v0.1.9
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling itoa v0.4.6
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling strum v0.18.0
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling bytecount v0.6.2
[INFO] [stderr]    Compiling fishers_exact v1.0.1
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling crossbeam-utils v0.8.1
[INFO] [stderr]    Compiling memoffset v0.6.1
[INFO] [stderr]    Compiling miniz_oxide v0.4.3
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling rayon v1.5.0
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling tinyvec v1.1.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling unicode-bidi v0.3.4
[INFO] [stderr]    Compiling matrixmultiply v0.2.3
[INFO] [stderr]    Compiling itertools v0.9.0
[INFO] [stderr]    Compiling form_urlencoded v1.0.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling bit-set v0.5.2
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling aho-corasick v0.7.15
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling petgraph v0.4.13
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling unicode-normalization v0.1.16
[INFO] [stderr]    Compiling quote v1.0.7
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling regex-automata v0.1.9
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling idna v0.2.0
[INFO] [stderr]    Compiling jobserver v0.1.21
[INFO] [stderr]    Compiling num_cpus v1.13.0
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling flate2 v1.0.19
[INFO] [stderr]    Compiling regex v1.4.2
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling cc v1.0.66
[INFO] [stderr]    Compiling url v2.2.0
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling num-traits v0.1.43
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.1.0
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling enum_primitive v0.1.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.1
[INFO] [stderr]    Compiling crossbeam-channel v0.5.0
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling crossbeam-deque v0.8.0
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling hts-sys v1.10.3
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.22
[INFO] [stderr]    Compiling snafu-derive v0.6.10
[INFO] [stderr]    Compiling structopt-derive v0.4.14
[INFO] [stderr]    Compiling strum_macros v0.18.0
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling thiserror v1.0.22
[INFO] [stderr]    Compiling niffler v2.2.0
[INFO] [stderr]    Compiling snafu v0.6.10
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling bstr v0.2.14
[INFO] [stderr]    Compiling multimap v0.6.0
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling rust-htslib v0.31.0
[INFO] [stderr]    Compiling csv v1.1.5
[INFO] [stderr]    Compiling structopt v0.3.21
[INFO] [stderr]    Compiling rustynuc v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 43.09s
[INFO] running `Command { std: "docker" "inspect" "fe336504db52e2dc63c218921c282b2a3639f67e4e091449b5e327d33fc57861", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fe336504db52e2dc63c218921c282b2a3639f67e4e091449b5e327d33fc57861", kill_on_drop: false }`
[INFO] [stdout] fe336504db52e2dc63c218921c282b2a3639f67e4e091449b5e327d33fc57861
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ad2d0ec65a3c504a8e2d65d91f173d3b6e63ad787174befb10bc20d76f26447f
[INFO] running `Command { std: "docker" "start" "-a" "ad2d0ec65a3c504a8e2d65d91f173d3b6e63ad787174befb10bc20d76f26447f", kill_on_drop: false }`
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]    Compiling serde_json v1.0.60
[INFO] [stderr]    Compiling predicates-core v1.0.0
[INFO] [stderr]    Compiling treeline v0.1.0
[INFO] [stderr]    Compiling half v1.6.0
[INFO] [stderr]    Compiling same-file v1.0.6
[INFO] [stderr]    Compiling difference v2.0.0
[INFO] [stderr]    Compiling normalize-line-endings v0.3.0
[INFO] [stderr]    Compiling oorandom v11.1.3
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling float-cmp v0.8.0
[INFO] [stderr]    Compiling plotters v0.2.15
[INFO] [stderr]    Compiling walkdir v2.3.1
[INFO] [stderr]    Compiling serde_cbor v0.11.1
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling predicates v1.0.5
[INFO] [stderr]    Compiling predicates-tree v1.0.0
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]    Compiling assert_cmd v1.0.2
[INFO] [stderr]    Compiling cast v0.2.3
[INFO] [stderr]    Compiling tinytemplate v1.1.0
[INFO] [stderr]    Compiling criterion-plot v0.4.3
[INFO] [stderr]    Compiling criterion v0.3.3
[INFO] [stderr]    Compiling rustynuc v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 13.25s
[INFO] running `Command { std: "docker" "inspect" "ad2d0ec65a3c504a8e2d65d91f173d3b6e63ad787174befb10bc20d76f26447f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ad2d0ec65a3c504a8e2d65d91f173d3b6e63ad787174befb10bc20d76f26447f", kill_on_drop: false }`
[INFO] [stdout] ad2d0ec65a3c504a8e2d65d91f173d3b6e63ad787174befb10bc20d76f26447f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-32/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 64799343e9c8d19ec9348f3539c7accf6b2c2a585e884e7186107844fcffc48c
[INFO] running `Command { std: "docker" "start" "-a" "64799343e9c8d19ec9348f3539c7accf6b2c2a585e884e7186107844fcffc48c", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.12s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/rustynuc-18e94a7f52df16bd)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/tests.rs (/opt/rustwide/target/debug/deps/tests-0684a1f2f07e3551)
[INFO] [stdout] 
[INFO] [stdout] running 14 tests
[INFO] [stdout] test cli_no_args ... ok
[INFO] [stdout] test cli_no_such_file ... ok
[INFO] [stdout] test cli_dont_warn_as_no_mnp ... ok
[INFO] [stdout] test cli_warn_about_mnp ... ok
[INFO] [stdout] test cli_oxog_bcf ... ok
[INFO] [stdout] test cli_oxog_bcf_skip_fishers ... ok
[INFO] [stdout] test cli_not_oxog_as_above_either_pass ... ok
[INFO] [stdout] test cli_af_not_above_one ... ok
[INFO] [stdout] test cli_not_false_positive_as_they_pass_either_above_af ... ok
[INFO] [stdout] test cli_not_false_positive_oxog_one_freq_above_af_either_pass ... ok
[INFO] [stdout] test cli_false_positive_oxog_as_not_above_either_or_both ... ok
[INFO] [stdout] test cli_oxog_bam ... ok
[INFO] [stdout] test cli_normal_bam ... ok
[INFO] [stdout] test cli_print_all ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 14 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.68s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "64799343e9c8d19ec9348f3539c7accf6b2c2a585e884e7186107844fcffc48c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "64799343e9c8d19ec9348f3539c7accf6b2c2a585e884e7186107844fcffc48c", kill_on_drop: false }`
[INFO] [stdout] 64799343e9c8d19ec9348f3539c7accf6b2c2a585e884e7186107844fcffc48c
