[INFO] cloning repository https://github.com/informationsea/sequencetoolkit
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/informationsea/sequencetoolkit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d3244698b3dad669577b81f0d3c912fc76e14d25
[INFO] testing informationsea/sequencetoolkit against beta-2021-08-01 for beta-1.55-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit" "/workspace/builds/worker-19/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-19/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/informationsea/sequencetoolkit on toolchain beta-2021-08-01
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/informationsea/sequencetoolkit
[INFO] finished tweaking git repo https://github.com/informationsea/sequencetoolkit
[INFO] tweaked toml for git repo https://github.com/informationsea/sequencetoolkit written to /workspace/builds/worker-19/source/Cargo.toml
[INFO] crate git repo https://github.com/informationsea/sequencetoolkit already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded shlex v1.0.0
[INFO] [stderr]   Downloaded env_logger v0.8.4
[INFO] [stderr]   Downloaded bindgen v0.58.1
[INFO] [stderr]   Downloaded cc v1.0.68
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded enum-map v0.6.4
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded ndarray v0.13.1
[INFO] [stderr]   Downloaded snap v1.0.5
[INFO] [stderr]   Downloaded lz4 v1.23.2
[INFO] [stderr]   Downloaded xz2 v0.1.6
[INFO] [stderr]   Downloaded alloc-no-stdlib v2.0.1
[INFO] [stderr]   Downloaded brotli-decompressor v2.3.1
[INFO] [stderr]   Downloaded snafu-derive v0.6.10
[INFO] [stderr]   Downloaded bstr v0.2.16
[INFO] [stderr]   Downloaded alloc-stdlib v0.2.1
[INFO] [stderr]   Downloaded bincode v1.3.3
[INFO] [stderr]   Downloaded bio-types v0.11.0
[INFO] [stderr]   Downloaded snafu v0.6.10
[INFO] [stderr]   Downloaded bio v0.32.0
[INFO] [stderr]   Downloaded feature-probe v0.1.1
[INFO] [stderr]   Downloaded zstd v0.5.4+zstd.1.4.7
[INFO] [stderr]   Downloaded matrixmultiply v0.2.4
[INFO] [stderr]   Downloaded zstd-safe v2.0.6+zstd.1.4.7
[INFO] [stderr]   Downloaded enum-map-derive v0.4.6
[INFO] [stderr]   Downloaded addr2line v0.15.2
[INFO] [stderr]   Downloaded ordered-float v1.1.1
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded regex-automata v0.1.10
[INFO] [stderr]   Downloaded bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]   Downloaded object v0.25.3
[INFO] [stderr]   Downloaded gimli v0.24.0
[INFO] [stderr]   Downloaded triple_accel v0.3.4
[INFO] [stderr]   Downloaded lz4-sys v1.9.2
[INFO] [stderr]   Downloaded lzma-sys v0.1.17
[INFO] [stderr]   Downloaded brotli v3.3.0
[INFO] [stderr]   Downloaded zstd-sys v1.4.18+zstd.1.4.7
[INFO] [stderr]   Downloaded autocompress v0.1.0
[INFO] [stderr]   Downloaded bio-types v0.7.0
[INFO] [stderr]   Downloaded bv v0.11.1
[INFO] [stderr]   Downloaded rustc-demangle v0.1.20
[INFO] [stderr]   Downloaded vcf v0.5.0
[INFO] [stderr]   Downloaded xlsxwriter v0.3.4
[INFO] [stderr]   Downloaded backtrace v0.3.60
[INFO] [stderr]   Downloaded libxlsxwriter-sys v1.0.6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7db8bd7feb8360c494e87199203f7114a57e4a6972bb7fd2c1dd99ccdcaba76d
[INFO] running `Command { std: "docker" "start" "-a" "7db8bd7feb8360c494e87199203f7114a57e4a6972bb7fd2c1dd99ccdcaba76d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7db8bd7feb8360c494e87199203f7114a57e4a6972bb7fd2c1dd99ccdcaba76d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7db8bd7feb8360c494e87199203f7114a57e4a6972bb7fd2c1dd99ccdcaba76d", kill_on_drop: false }`
[INFO] [stdout] 7db8bd7feb8360c494e87199203f7114a57e4a6972bb7fd2c1dd99ccdcaba76d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a3be7851ec81320726cdcd24c6db616c07a50e68dd4e410f5de533b4c1ec51e6
[INFO] running `Command { std: "docker" "start" "-a" "a3be7851ec81320726cdcd24c6db616c07a50e68dd4e410f5de533b4c1ec51e6", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling libc v0.2.98
[INFO] [stderr]    Compiling syn v1.0.73
[INFO] [stderr]    Compiling lexical-core v0.7.6
[INFO] [stderr]    Compiling arrayvec v0.5.2
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling gimli v0.24.0
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling rustc-demangle v0.1.20
[INFO] [stderr]    Compiling alloc-no-stdlib v2.0.1
[INFO] [stderr]    Compiling zstd-safe v2.0.6+zstd.1.4.7
[INFO] [stderr]    Compiling bindgen v0.58.1
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling snap v1.0.5
[INFO] [stderr]    Compiling shlex v1.0.0
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling bio v0.32.0
[INFO] [stderr]    Compiling array-macro v1.0.5
[INFO] [stderr]    Compiling bytecount v0.6.2
[INFO] [stderr]    Compiling triple_accel v0.3.4
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.18.0
[INFO] [stderr]    Compiling memchr v2.4.0
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling clang-sys v1.2.0
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling matrixmultiply v0.2.4
[INFO] [stderr]    Compiling bit-set v0.5.2
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling alloc-stdlib v0.2.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling object v0.25.3
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling brotli-decompressor v2.3.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling petgraph v0.5.1
[INFO] [stderr]    Compiling jobserver v0.1.22
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling flate2 v1.0.20
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling cc v1.0.68
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling brotli v3.3.0
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.1.1
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling addr2line v0.15.2
[INFO] [stderr]    Compiling zstd-sys v1.4.18+zstd.1.4.7
[INFO] [stderr]    Compiling backtrace v0.3.60
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling lz4-sys v1.9.2
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling env_logger v0.8.4
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stderr]    Compiling xz2 v0.1.6
[INFO] [stderr] error: could not compile `brotli`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name brotli /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/brotli-3.3.0/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="alloc-stdlib"' --cfg 'feature="default"' --cfg 'feature="std"' -C metadata=1927169b2f70964d -C extra-filename=-1927169b2f70964d --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern alloc_no_stdlib=/opt/rustwide/target/debug/deps/liballoc_no_stdlib-3c417c1eb8f4b32a.rmeta --extern alloc_stdlib=/opt/rustwide/target/debug/deps/liballoc_stdlib-53a98c0fe0b58895.rmeta --extern brotli_decompressor=/opt/rustwide/target/debug/deps/libbrotli_decompressor-f885506879789bf8.rmeta --cap-lints allow --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "a3be7851ec81320726cdcd24c6db616c07a50e68dd4e410f5de533b4c1ec51e6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a3be7851ec81320726cdcd24c6db616c07a50e68dd4e410f5de533b4c1ec51e6", kill_on_drop: false }`
[INFO] [stdout] a3be7851ec81320726cdcd24c6db616c07a50e68dd4e410f5de533b4c1ec51e6
