[INFO] cloning repository https://github.com/MarcoMernberger/mbf_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MarcoMernberger/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMarcoMernberger%2Fmbf_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMarcoMernberger%2Fmbf_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 34e16cfeccb834cd3fa04ebf52845b699f518678
[INFO] testing MarcoMernberger/mbf_bam against beta-2021-08-01 for beta-1.55-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMarcoMernberger%2Fmbf_bam" "/workspace/builds/worker-12/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/MarcoMernberger/mbf_bam on toolchain beta-2021-08-01
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/MarcoMernberger/mbf_bam
[INFO] finished tweaking git repo https://github.com/MarcoMernberger/mbf_bam
[INFO] tweaked toml for git repo https://github.com/MarcoMernberger/mbf_bam written to /workspace/builds/worker-12/source/Cargo.toml
[INFO] crate git repo https://github.com/MarcoMernberger/mbf_bam already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded ctor v0.1.8
[INFO] [stderr]   Downloaded csv v1.0.6
[INFO] [stderr]   Downloaded csv-core v0.1.5
[INFO] [stderr]   Downloaded rust-htslib v0.24.0
[INFO] [stderr]   Downloaded bio v0.25.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4e71734da2488b8f8e956a62f3eb8915a183d8c4e57066339860e85228e09415
[INFO] running `Command { std: "docker" "start" "-a" "4e71734da2488b8f8e956a62f3eb8915a183d8c4e57066339860e85228e09415", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4e71734da2488b8f8e956a62f3eb8915a183d8c4e57066339860e85228e09415", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4e71734da2488b8f8e956a62f3eb8915a183d8c4e57066339860e85228e09415", kill_on_drop: false }`
[INFO] [stdout] 4e71734da2488b8f8e956a62f3eb8915a183d8c4e57066339860e85228e09415
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e4c25e24486504b7aec46d8dd5a2c1505356c10d798622ab55ff29d52932d1b0
[INFO] running `Command { std: "docker" "start" "-a" "e4c25e24486504b7aec46d8dd5a2c1505356c10d798622ab55ff29d52932d1b0", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.65
[INFO] [stderr]    Compiling proc-macro2 v0.4.27
[INFO] [stderr]    Compiling syn v0.15.30
[INFO] [stderr]    Compiling cc v1.0.35
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling cfg-if v0.1.7
[INFO] [stderr]    Compiling serde v1.0.90
[INFO] [stderr]    Compiling byteorder v1.3.1
[INFO] [stderr]    Compiling glob v0.2.11
[INFO] [stderr]    Compiling proc-macro2 v1.0.6
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bindgen v0.51.1
[INFO] [stderr]    Compiling termcolor v1.0.4
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling proc-macro-hack-impl v0.4.1
[INFO] [stderr]    Compiling num-complex v0.2.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling autocfg v0.1.2
[INFO] [stderr]    Compiling smallvec v0.6.9
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling num-integer v0.1.39
[INFO] [stderr]    Compiling rustc-demangle v0.1.13
[INFO] [stderr]    Compiling bio v0.25.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling bit-vec v0.5.1
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling bytecount v0.3.2
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling spin v0.5.0
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]    Compiling fs-utils v1.1.0
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling itertools v0.8.0
[INFO] [stderr]    Compiling unicode-normalization v0.1.8
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.0.2
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling log v0.4.6
[INFO] [stderr]    Compiling crossbeam-utils v0.2.2
[INFO] [stderr]    Compiling crc32fast v1.2.0
[INFO] [stderr]    Compiling bit-set v0.5.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling bv v0.10.0
[INFO] [stderr]    Compiling crossbeam-epoch v0.3.1
[INFO] [stderr]    Compiling backtrace v0.3.15
[INFO] [stderr]    Compiling clang-sys v0.28.0
[INFO] [stderr]    Compiling crossbeam-deque v0.2.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling libloading v0.5.0
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling lzma-sys v0.1.14
[INFO] [stderr]    Compiling backtrace-sys v0.1.28
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling proc-macro-hack v0.4.1
[INFO] [stderr]    Compiling rustc-hash v1.0.1
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling quote v0.6.12
[INFO] [stderr]    Compiling idna v0.1.5
[INFO] [stderr]    Compiling atty v0.2.11
[INFO] [stderr]    Compiling which v3.1.0
[INFO] [stderr]    Compiling rand v0.4.6
[INFO] [stderr]    Compiling num_cpus v1.10.0
[INFO] [stderr]    Compiling flate2 v1.0.13
[INFO] [stderr]    Compiling quote v1.0.2
[INFO] [stderr]    Compiling mashup-impl v0.1.9
[INFO] [stderr]    Compiling rayon-core v1.4.1
[INFO] [stderr]    Compiling aho-corasick v0.7.6
[INFO] [stderr]    Compiling csv-core v0.1.5
[INFO] [stderr]    Compiling url v1.7.2
[INFO] [stderr]    Compiling rand v0.3.23
[INFO] [stderr]    Compiling rayon v1.0.3
[INFO] [stderr]    Compiling statrs v0.9.0
[INFO] [stderr]    Compiling mashup v0.1.9
[INFO] [stderr]    Compiling cexpr v0.3.5
[INFO] [stderr]    Compiling regex v1.3.1
[INFO] [stderr]    Compiling env_logger v0.6.1
[INFO] [stderr]    Compiling pyo3 v0.6.0
[INFO] [stderr]    Compiling pyo3-derive-backend v0.6.0
[INFO] [stderr]    Compiling synstructure v0.10.1
[INFO] [stderr] error: failed to run custom build command for `pyo3 v0.6.0`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/pyo3-e52c26d893018388/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr]   Error: pyo3 requires a nightly or dev version of Rust.
[INFO] [stderr]   Installed version is: 1.55.0-beta.3 (2021-07-31). Minimum required: 1.34.0-nightly (2019-02-06).
[INFO] [stderr]   thread 'main' panicked at 'Aborting compilation due to incompatible compiler.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.6.0/build.rs:540:17
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x55c912b555d0 - std::backtrace_rs::backtrace::libunwind::trace::hff4d1766e93f64f1
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5
[INFO] [stderr]      1:     0x55c912b555d0 - std::backtrace_rs::backtrace::trace_unsynchronized::h56bbc8eb78770bcb
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x55c912b555d0 - std::sys_common::backtrace::_print_fmt::h5c8e75464faca780
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:67:5
[INFO] [stderr]      3:     0x55c912b555d0 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h48b88277def8b362
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:46:22
[INFO] [stderr]      4:     0x55c912b72fec - core::fmt::write::h3381b3176fe2b3d3
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/core/src/fmt/mod.rs:1115:17
[INFO] [stderr]      5:     0x55c912b532c5 - std::io::Write::write_fmt::hd42607e5d8e44db0
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/io/mod.rs:1665:15
[INFO] [stderr]      6:     0x55c912b574db - std::sys_common::backtrace::_print::ha537687d6c17dd0d
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:49:5
[INFO] [stderr]      7:     0x55c912b574db - std::sys_common::backtrace::print::h61376ae57d131d72
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:36:9
[INFO] [stderr]      8:     0x55c912b574db - std::panicking::default_hook::{{closure}}::h0f7208c0b9644a54
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:208:50
[INFO] [stderr]      9:     0x55c912b56fb1 - std::panicking::default_hook::hdac7fc06578c14ce
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:225:9
[INFO] [stderr]     10:     0x55c912b57ba4 - std::panicking::rust_panic_with_hook::h72b21c283da3d1ef
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:622:17
[INFO] [stderr]     11:     0x55c912a9b693 - std::panicking::begin_panic::{{closure}}::hdea85a2a9c22b205
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:542:9
[INFO] [stderr]     12:     0x55c912a73259 - std::sys_common::backtrace::__rust_end_short_backtrace::h86c7747d361a11a1
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:141:18
[INFO] [stderr]     13:     0x55c912a9b5c9 - std::panicking::begin_panic::h3a0ee011070efe47
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:541:12
[INFO] [stderr]     14:     0x55c912967102 - build_script_build::check_rustc_version::h4202800cb550b24b
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.6.0/build.rs:540:17
[INFO] [stderr]     15:     0x55c912967604 - build_script_build::main::h7bcd03788b9f2760
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pyo3-0.6.0/build.rs:564:5
[INFO] [stderr]     16:     0x55c912978b12 - core::ops::function::FnOnce::call_once::h15c00433562ff438
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/core/src/ops/function.rs:227:5
[INFO] [stderr]     17:     0x55c91297745a - std::sys_common::backtrace::__rust_begin_short_backtrace::hb0b82681fa409888
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:125:18
[INFO] [stderr]     18:     0x55c9129775d6 - std::rt::lang_start::{{closure}}::ha2aae30a534b8113
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:63:18
[INFO] [stderr]     19:     0x55c912b580aa - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::ha88a7d1a4d24e549
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/core/src/ops/function.rs:259:13
[INFO] [stderr]     20:     0x55c912b580aa - std::panicking::try::do_call::hd3b1d7740607ccc7
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:401:40
[INFO] [stderr]     21:     0x55c912b580aa - std::panicking::try::h0ee8c65ac7461507
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:365:19
[INFO] [stderr]     22:     0x55c912b580aa - std::panic::catch_unwind::head47f0de4ccd838
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panic.rs:434:14
[INFO] [stderr]     23:     0x55c912b580aa - std::rt::lang_start_internal::{{closure}}::hbc7de8ec820ac085
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:45:48
[INFO] [stderr]     24:     0x55c912b580aa - std::panicking::try::do_call::h2609e52e8bad4a7b
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:401:40
[INFO] [stderr]     25:     0x55c912b580aa - std::panicking::try::hd0929f0b603e0389
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:365:19
[INFO] [stderr]     26:     0x55c912b580aa - std::panic::catch_unwind::h27902b81c3e47571
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panic.rs:434:14
[INFO] [stderr]     27:     0x55c912b580aa - std::rt::lang_start_internal::h3fb2d794dd391e3e
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:45:20
[INFO] [stderr]     28:     0x55c9129775a0 - std::rt::lang_start::he8d2a55f13773617
[INFO] [stderr]                                  at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:62:5
[INFO] [stderr]     29:     0x55c912968aec - main
[INFO] [stderr]     30:     0x7f6f60a5e0b3 - __libc_start_main
[INFO] [stderr]     31:     0x55c91295fefe - _start
[INFO] [stderr]     32:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "e4c25e24486504b7aec46d8dd5a2c1505356c10d798622ab55ff29d52932d1b0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e4c25e24486504b7aec46d8dd5a2c1505356c10d798622ab55ff29d52932d1b0", kill_on_drop: false }`
[INFO] [stdout] e4c25e24486504b7aec46d8dd5a2c1505356c10d798622ab55ff29d52932d1b0
