[INFO] cloning repository https://github.com/Axect/Galmorph [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Axect/Galmorph" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 21de14073b013984b7f1daaaffb0d32e045eddb8 [INFO] testing Axect/Galmorph against beta-2021-08-01 for beta-1.55-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph" "/workspace/builds/worker-4/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Axect/Galmorph on toolchain beta-2021-08-01 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Axect/Galmorph [INFO] finished tweaking git repo https://github.com/Axect/Galmorph [INFO] tweaked toml for git repo https://github.com/Axect/Galmorph written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/Axect/Galmorph already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-08-01" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded serde_derive v1.0.116 [INFO] [stderr] Downloaded syn v1.0.44 [INFO] [stderr] Downloaded libc v0.2.79 [INFO] [stderr] Downloaded matrixmultiply v0.2.3 [INFO] [stderr] Downloaded netcdf v0.5.1 [INFO] [stderr] Downloaded libloading v0.6.4 [INFO] [stderr] Downloaded hdf5-sys v0.7.0 [INFO] [stderr] Downloaded peroxide-ad v0.1.4 [INFO] [stderr] Downloaded rand_distr v0.3.0 [INFO] [stderr] Downloaded regex-syntax v0.6.19 [INFO] [stderr] Downloaded serde v1.0.116 [INFO] [stderr] Downloaded cc v1.0.61 [INFO] [stderr] Downloaded puruspe v0.1.4 [INFO] [stderr] Downloaded libz-sys v1.1.2 [INFO] [stderr] Downloaded puruda-macro v0.1.1 [INFO] [stderr] Downloaded regex v1.4.0 [INFO] [stderr] Downloaded peroxide v0.27.0 [INFO] [stderr] Downloaded fitsio v0.16.0 [INFO] [stderr] Downloaded fitsio-sys v0.3.0 [INFO] [stderr] Downloaded netcdf-sys v0.3.2 [INFO] [stderr] Downloaded vcpkg v0.2.10 [INFO] [stderr] Downloaded pkg-config v0.3.18 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 08dac7642bbd36ab3a5df77132f08960b93bff8417a9dc0a08383a6cc0144145 [INFO] running `Command { std: "docker" "start" "-a" "08dac7642bbd36ab3a5df77132f08960b93bff8417a9dc0a08383a6cc0144145", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "08dac7642bbd36ab3a5df77132f08960b93bff8417a9dc0a08383a6cc0144145", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "08dac7642bbd36ab3a5df77132f08960b93bff8417a9dc0a08383a6cc0144145", kill_on_drop: false }` [INFO] [stdout] 08dac7642bbd36ab3a5df77132f08960b93bff8417a9dc0a08383a6cc0144145 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-08-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 81fbebd9fd8cb9f10b0d6e97fb3da1ed2e7f00c3572e5f54f3efe768fbcacf39 [INFO] running `Command { std: "docker" "start" "-a" "81fbebd9fd8cb9f10b0d6e97fb3da1ed2e7f00c3572e5f54f3efe768fbcacf39", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling regex-syntax v0.6.19 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling cc v1.0.61 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling netcdf-sys v0.3.2 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling peroxide v0.27.0 [INFO] [stderr] Compiling json v0.12.4 [INFO] [stderr] Compiling puruspe v0.1.4 [INFO] [stderr] Compiling order-stat v0.1.3 [INFO] [stderr] Compiling puruda-macro v0.1.1 [INFO] [stderr] Compiling peroxide-ad v0.1.4 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling libloading v0.6.4 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling fitsio-sys v0.3.0 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling lapack-sys v0.12.1 [INFO] [stderr] Compiling blas-sys v0.7.1 [INFO] [stderr] Compiling fitsio v0.16.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling regex v1.4.0 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling lapack v0.16.0 [INFO] [stderr] Compiling blas v0.20.0 [INFO] [stderr] Compiling rand_distr v0.3.0 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-9fc85e64233f09e6/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55e160741230 - std::backtrace_rs::backtrace::libunwind::trace::hff4d1766e93f64f1 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55e160741230 - std::backtrace_rs::backtrace::trace_unsynchronized::h56bbc8eb78770bcb [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55e160741230 - std::sys_common::backtrace::_print_fmt::h5c8e75464faca780 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55e160741230 - ::fmt::h48b88277def8b362 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55e16075f77c - core::fmt::write::h3381b3176fe2b3d3 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x55e16073e7d5 - std::io::Write::write_fmt::hd42607e5d8e44db0 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/io/mod.rs:1665:15 [INFO] [stderr] 6: 0x55e1607432ab - std::sys_common::backtrace::_print::ha537687d6c17dd0d [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55e1607432ab - std::sys_common::backtrace::print::h61376ae57d131d72 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55e1607432ab - std::panicking::default_hook::{{closure}}::h0f7208c0b9644a54 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55e160742d81 - std::panicking::default_hook::hdac7fc06578c14ce [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55e160743974 - std::panicking::rust_panic_with_hook::h72b21c283da3d1ef [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55e16056dca3 - std::panicking::begin_panic::{{closure}}::hb348256844360bdb [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:542:9 [INFO] [stderr] 12: 0x55e160568f99 - std::sys_common::backtrace::__rust_end_short_backtrace::h5a5654e209cb1afe [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55e16056dbd9 - std::panicking::begin_panic::h3d8e7969878caea6 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:541:12 [INFO] [stderr] 14: 0x55e16053ed87 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h32cf838879bf9912 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x55e1605405ab - build_script_build::main::h99e645c31531a625 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x55e160543d1b - core::ops::function::FnOnce::call_once::h0668a5abfaa26e42 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55e16054ae0e - std::sys_common::backtrace::__rust_begin_short_backtrace::h7ba9cb13e39ec904 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55e16054a021 - std::rt::lang_start::{{closure}}::h820393db3df92781 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:63:18 [INFO] [stderr] 19: 0x55e160743e7a - core::ops::function::impls:: for &F>::call_once::ha88a7d1a4d24e549 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55e160743e7a - std::panicking::try::do_call::hd3b1d7740607ccc7 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:401:40 [INFO] [stderr] 21: 0x55e160743e7a - std::panicking::try::h0ee8c65ac7461507 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:365:19 [INFO] [stderr] 22: 0x55e160743e7a - std::panic::catch_unwind::head47f0de4ccd838 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panic.rs:434:14 [INFO] [stderr] 23: 0x55e160743e7a - std::rt::lang_start_internal::{{closure}}::hbc7de8ec820ac085 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:45:48 [INFO] [stderr] 24: 0x55e160743e7a - std::panicking::try::do_call::h2609e52e8bad4a7b [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:401:40 [INFO] [stderr] 25: 0x55e160743e7a - std::panicking::try::hd0929f0b603e0389 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panicking.rs:365:19 [INFO] [stderr] 26: 0x55e160743e7a - std::panic::catch_unwind::h27902b81c3e47571 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/panic.rs:434:14 [INFO] [stderr] 27: 0x55e160743e7a - std::rt::lang_start_internal::h3fb2d794dd391e3e [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:45:20 [INFO] [stderr] 28: 0x55e160549ff0 - std::rt::lang_start::hf85312b8f6aa1fb1 [INFO] [stderr] at /rustc/53fd98ca776cb875bc9e5514f56b52eb74f9e7a9/library/std/src/rt.rs:62:5 [INFO] [stderr] 29: 0x55e160541a9c - main [INFO] [stderr] 30: 0x7f68ec48f0b3 - __libc_start_main [INFO] [stderr] 31: 0x55e160539f0e - _start [INFO] [stderr] 32: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "81fbebd9fd8cb9f10b0d6e97fb3da1ed2e7f00c3572e5f54f3efe768fbcacf39", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "81fbebd9fd8cb9f10b0d6e97fb3da1ed2e7f00c3572e5f54f3efe768fbcacf39", kill_on_drop: false }` [INFO] [stdout] 81fbebd9fd8cb9f10b0d6e97fb3da1ed2e7f00c3572e5f54f3efe768fbcacf39