[INFO] cloning repository https://github.com/10XGenomics/vartrix
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/10XGenomics/vartrix" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] bf8e95056b48779bea13951fddeb2c9c96720f04
[INFO] testing 10XGenomics/vartrix against 1.54.0 for beta-1.55-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix" "/workspace/builds/worker-85/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-85/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/vartrix on toolchain 1.54.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.54.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] finished tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] tweaked toml for git repo https://github.com/10XGenomics/vartrix written to /workspace/builds/worker-85/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/vartrix already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.54.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded terminal_size v0.1.8
[INFO] [stderr]   Downloaded simplelog v0.5.3
[INFO] [stderr]   Downloaded rust-htslib v0.36.0
[INFO] [stderr]   Downloaded snafu v0.5.0
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded snafu-derive v0.5.0
[INFO] [stderr]   Downloaded human-panic v1.0.1
[INFO] [stderr]   Downloaded alga v0.5.4
[INFO] [stderr]   Downloaded bio v0.30.0
[INFO] [stderr]   Downloaded bio-types v0.10.0
[INFO] [stderr]   Downloaded hts-sys v1.11.1-fix1
[INFO] [stderr]   Downloaded curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]   Downloaded fs-utils v1.1.1
[INFO] [stderr]   Downloaded sprs v0.6.5
[INFO] [stderr]   Downloaded openssl-src v111.10.2+1.1.1g
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-85/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-85/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+1.54.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b12b2425f76f0db59bdbcc1792931e06e52763452e04f80cf6690faea392df8d
[INFO] running `Command { std: "docker" "start" "-a" "b12b2425f76f0db59bdbcc1792931e06e52763452e04f80cf6690faea392df8d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b12b2425f76f0db59bdbcc1792931e06e52763452e04f80cf6690faea392df8d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b12b2425f76f0db59bdbcc1792931e06e52763452e04f80cf6690faea392df8d", kill_on_drop: false }`
[INFO] [stdout] b12b2425f76f0db59bdbcc1792931e06e52763452e04f80cf6690faea392df8d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-85/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-85/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+1.54.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 145dfa336f5e212dc00687cddb45cea9ba1e807b4bf27a9724e684741f492b1c
[INFO] running `Command { std: "docker" "start" "-a" "145dfa336f5e212dc00687cddb45cea9ba1e807b4bf27a9724e684741f492b1c", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.62
[INFO] [stderr]    Compiling autocfg v0.1.6
[INFO] [stderr]    Compiling proc-macro2 v1.0.3
[INFO] [stderr]    Compiling unicode-xid v0.2.0
[INFO] [stderr]    Compiling syn v1.0.11
[INFO] [stderr]    Compiling cfg-if v0.1.9
[INFO] [stderr]    Compiling pkg-config v0.3.16
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling serde v1.0.101
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling rand_core v0.4.2
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]    Compiling byteorder v1.3.2
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling quick-error v1.2.2
[INFO] [stderr]    Compiling either v1.5.3
[INFO] [stderr]    Compiling regex-syntax v0.6.12
[INFO] [stderr]    Compiling arrayvec v0.4.11
[INFO] [stderr]    Compiling getrandom v0.1.12
[INFO] [stderr]    Compiling unicode-segmentation v1.3.0
[INFO] [stderr]    Compiling rustc-demangle v0.1.16
[INFO] [stderr]    Compiling nodrop v0.1.13
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling failure_derive v0.1.5
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling doc-comment v0.3.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.5
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling smallvec v0.6.10
[INFO] [stderr]    Compiling ryu v1.0.0
[INFO] [stderr]    Compiling scopeguard v1.0.0
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling remove_dir_all v0.5.2
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling rayon-core v1.6.0
[INFO] [stderr]    Compiling rawpointer v0.1.0
[INFO] [stderr]    Compiling log v0.4.8
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]    Compiling rustc-serialize v0.3.24
[INFO] [stderr]    Compiling crc32fast v1.2.0
[INFO] [stderr]    Compiling bit-vec v0.5.1
[INFO] [stderr]    Compiling ordermap v0.3.5
[INFO] [stderr]    Compiling fixedbitset v0.1.9
[INFO] [stderr]    Compiling adler32 v1.0.4
[INFO] [stderr]    Compiling bio v0.30.0
[INFO] [stderr]    Compiling approx v0.1.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling unicode-width v0.1.6
[INFO] [stderr]    Compiling itoa v0.4.4
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling strum v0.16.0
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling fnv v1.0.6
[INFO] [stderr]    Compiling bytecount v0.6.0
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling termcolor v0.3.6
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling crossbeam-utils v0.6.6
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling fs-utils v1.1.1
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling itertools v0.8.0
[INFO] [stderr]    Compiling itertools v0.6.5
[INFO] [stderr]    Compiling rand_core v0.3.1
[INFO] [stderr]    Compiling rand_jitter v0.1.4
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling matrixmultiply v0.2.3
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr] error: could not compile `pkg-config`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name pkg_config /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pkg-config-0.3.16/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 -C metadata=272b9d86c427906e -C extra-filename=-272b9d86c427906e --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "145dfa336f5e212dc00687cddb45cea9ba1e807b4bf27a9724e684741f492b1c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "145dfa336f5e212dc00687cddb45cea9ba1e807b4bf27a9724e684741f492b1c", kill_on_drop: false }`
[INFO] [stdout] 145dfa336f5e212dc00687cddb45cea9ba1e807b4bf27a9724e684741f492b1c