[INFO] fetching crate cartograph 0.1.2... [INFO] testing cartograph-0.1.2 against beta-2021-01-01 for beta-1.50-1 [INFO] extracting crate cartograph 0.1.2 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate cartograph 0.1.2 on toolchain beta-2021-01-01 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate cartograph 0.1.2 [INFO] finished tweaking crates.io crate cartograph 0.1.2 [INFO] tweaked toml for crates.io crate cartograph 0.1.2 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] crate crates.io crate cartograph 0.1.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded simba v0.3.1 [INFO] [stderr] Downloaded json5 v0.2.8 [INFO] [stderr] Downloaded noisy_float v0.1.13 [INFO] [stderr] Downloaded arctk-attr v0.2.0 [INFO] [stderr] Downloaded netcdf v0.5.2 [INFO] [stderr] Downloaded slice-of-array v0.2.1 [INFO] [stderr] Downloaded arctk-proc v0.2.0 [INFO] [stderr] Downloaded libloading v0.6.5 [INFO] [stderr] Downloaded hdf5-sys v0.7.0 [INFO] [stderr] Downloaded ndarray v0.12.1 [INFO] [stderr] Downloaded ansi_rgb v0.2.0 [INFO] [stderr] Downloaded rand_distr v0.3.0 [INFO] [stderr] Downloaded ndarray-stats v0.3.0 [INFO] [stderr] Downloaded nalgebra v0.23.0 [INFO] [stderr] Downloaded netcdf-sys v0.3.3 [INFO] [stderr] Downloaded arctk v0.11.1 [INFO] [stderr] Downloaded palette v0.5.0 [INFO] [stderr] Downloaded palette_derive v0.5.0 [INFO] [stderr] Downloaded paste v1.0.2 [INFO] [stderr] Downloaded ndarray-parallel v0.9.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 35086e4e2e4c36597b60518a8f1f9336896c45fffba1bb7b15ad294e9ca6d2cf [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "35086e4e2e4c36597b60518a8f1f9336896c45fffba1bb7b15ad294e9ca6d2cf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "35086e4e2e4c36597b60518a8f1f9336896c45fffba1bb7b15ad294e9ca6d2cf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "35086e4e2e4c36597b60518a8f1f9336896c45fffba1bb7b15ad294e9ca6d2cf", kill_on_drop: false }` [INFO] [stdout] 35086e4e2e4c36597b60518a8f1f9336896c45fffba1bb7b15ad294e9ca6d2cf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b7b1de7807b77e893e7382ebd8fe5cbb8dde1875446478446637ca590cfdf034 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b7b1de7807b77e893e7382ebd8fe5cbb8dde1875446478446637ca590cfdf034", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling syn v1.0.48 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling const_fn v0.4.3 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling cc v1.0.62 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling siphasher v0.3.3 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling netcdf-sys v0.3.3 [INFO] [stderr] Compiling bytemuck v1.4.1 [INFO] [stderr] Compiling paste v1.0.2 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling hashbrown v0.9.1 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling number_prefix v0.3.0 [INFO] [stderr] Compiling hex v0.4.2 [INFO] [stderr] Compiling slice-of-array v0.2.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.0 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Compiling rgb v0.8.25 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling typenum v1.12.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling phf v0.8.0 [INFO] [stderr] Compiling ansi_rgb v0.2.0 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling terminal_size v0.1.13 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling generic-array v0.14.4 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling colored v2.0.0 [INFO] [stderr] Compiling regex v1.4.2 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling approx v0.4.0 [INFO] [stderr] Compiling noisy_float v0.1.13 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling crossbeam-epoch v0.9.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-815c782e2c1fde7f/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x56160b17ad87 - std::backtrace_rs::backtrace::libunwind::trace::hcd6e187547b8deec [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x56160b17ad87 - std::backtrace_rs::backtrace::trace_unsynchronized::hde10036eb783fbc7 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x56160b17ad87 - std::sys_common::backtrace::_print_fmt::h63987b8f86dfc82a [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x56160b17ad87 - ::fmt::hc33f3ac4cc9c4196 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x56160b196bec - core::fmt::write::hfdcdeb08fb2b3afa [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/fmt/mod.rs:1078:17 [INFO] [stderr] 5: 0x56160b177912 - std::io::Write::write_fmt::h83a843778fa2a815 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/io/mod.rs:1519:15 [INFO] [stderr] 6: 0x56160b17ce25 - std::sys_common::backtrace::_print::hf179508b01f66878 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x56160b17ce25 - std::sys_common::backtrace::print::ha97d11adb39266a6 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x56160b17ce25 - std::panicking::default_hook::{{closure}}::h8da9985a98bd1582 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x56160b17c97a - std::panicking::default_hook::hbc0ee792993c2ef2 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x56160b17d5c1 - std::panicking::rust_panic_with_hook::h9fb9cda33a10f084 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x56160b0d2a9e - std::panicking::begin_panic::{{closure}}::hbe22389b3adb3b8c [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x56160b0a62b9 - std::sys_common::backtrace::__rust_end_short_backtrace::h7c93498253efc327 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x56160b0d29cb - std::panicking::begin_panic::ha4cd5f3756cde95e [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x56160af5515b - build_script_build::LibrarySearcher::try_locate_hdf5_library::h6282229af8cb53e2 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x56160af56a33 - build_script_build::main::h9429bcfc5700a1ae [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x56160af62c4b - core::ops::function::FnOnce::call_once::h6524f3c07fa6a372 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x56160af59dfe - std::sys_common::backtrace::__rust_begin_short_backtrace::hce07c54ae8d726cb [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x56160af61f71 - std::rt::lang_start::{{closure}}::h9ec4e620ed0c69a7 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x56160b17d9e7 - core::ops::function::impls:: for &F>::call_once::hb5ab992a536e3d7c [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x56160b17d9e7 - std::panicking::try::do_call::h1bda883686bc1816 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x56160b17d9e7 - std::panicking::try::ha7167c079f243e71 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x56160b17d9e7 - std::panic::catch_unwind::he11c3de53f0b5853 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panic.rs:396:14 [INFO] [stderr] 23: 0x56160b17d9e7 - std::rt::lang_start_internal::h45c3666b51d25060 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x56160af61f47 - std::rt::lang_start::hcb5141fd8f662615 [INFO] [stderr] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x56160af5807a - main [INFO] [stderr] 26: 0x7f8f746280b3 - __libc_start_main [INFO] [stderr] 27: 0x56160af500be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "b7b1de7807b77e893e7382ebd8fe5cbb8dde1875446478446637ca590cfdf034", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b7b1de7807b77e893e7382ebd8fe5cbb8dde1875446478446637ca590cfdf034", kill_on_drop: false }` [INFO] [stdout] b7b1de7807b77e893e7382ebd8fe5cbb8dde1875446478446637ca590cfdf034