[INFO] cloning repository https://github.com/guertinlab/kmer_mask_em
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/kmer_mask_em" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] c1ae4fc642bd6330c9db7a4cf31f9b304ff6a874
[INFO] testing guertinlab/kmer_mask_em against beta-2021-01-01 for beta-1.50-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em" "/workspace/builds/worker-6/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/guertinlab/kmer_mask_em on toolchain beta-2021-01-01
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/guertinlab/kmer_mask_em
[INFO] finished tweaking git repo https://github.com/guertinlab/kmer_mask_em
[INFO] tweaked toml for git repo https://github.com/guertinlab/kmer_mask_em written to /workspace/builds/worker-6/source/Cargo.toml
[INFO] crate git repo https://github.com/guertinlab/kmer_mask_em already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] error: the lock file /workspace/builds/worker-6/source/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag.
[INFO] the lockfile is outdated, regenerating it
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded utf8-ranges v1.0.4
[INFO] [stderr]   Downloaded deque v0.3.2
[INFO] [stderr]   Downloaded tabwriter v1.2.1
[INFO] [stderr]   Downloaded rayon v0.6.0
[INFO] [stderr]   Downloaded ucd-util v0.1.8
[INFO] [stderr]   Downloaded docopt v0.7.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5a2b5f945513367adf7261aa5ee22077f1767e39b311dab5d6b7c63f1745aa0d
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "5a2b5f945513367adf7261aa5ee22077f1767e39b311dab5d6b7c63f1745aa0d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5a2b5f945513367adf7261aa5ee22077f1767e39b311dab5d6b7c63f1745aa0d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5a2b5f945513367adf7261aa5ee22077f1767e39b311dab5d6b7c63f1745aa0d", kill_on_drop: false }`
[INFO] [stdout] 5a2b5f945513367adf7261aa5ee22077f1767e39b311dab5d6b7c63f1745aa0d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2fbe6d391c52ac89c94b8af619dc714723481f13ad5c508b4824c171ef749dd8
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "2fbe6d391c52ac89c94b8af619dc714723481f13ad5c508b4824c171ef749dd8", kill_on_drop: false }`
[INFO] [stderr]    Compiling deque v0.3.2
[INFO] [stderr]    Compiling tabwriter v1.2.1
[INFO] [stderr]    Compiling aho-corasick v0.6.10
[INFO] [stderr]    Compiling rayon v0.6.0
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling docopt v0.7.0
[INFO] [stderr]    Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 19.74s
[INFO] running `Command { std: "docker" "inspect" "2fbe6d391c52ac89c94b8af619dc714723481f13ad5c508b4824c171ef749dd8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2fbe6d391c52ac89c94b8af619dc714723481f13ad5c508b4824c171ef749dd8", kill_on_drop: false }`
[INFO] [stdout] 2fbe6d391c52ac89c94b8af619dc714723481f13ad5c508b4824c171ef749dd8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 6240e48f1b2b0b65e01ebad712336941b5c8a72389e98094fd59d3c8432313b3
[INFO] running `Command { std: "docker" "start" "-a" "6240e48f1b2b0b65e01ebad712336941b5c8a72389e98094fd59d3c8432313b3", kill_on_drop: false }`
[INFO] [stderr]    Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.22s
[INFO] running `Command { std: "docker" "inspect" "6240e48f1b2b0b65e01ebad712336941b5c8a72389e98094fd59d3c8432313b3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6240e48f1b2b0b65e01ebad712336941b5c8a72389e98094fd59d3c8432313b3", kill_on_drop: false }`
[INFO] [stdout] 6240e48f1b2b0b65e01ebad712336941b5c8a72389e98094fd59d3c8432313b3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 9e36a0fd1e23876b8d1dad8056f8465b7b6599cc36b7486107fc0c5915c528ab
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "9e36a0fd1e23876b8d1dad8056f8465b7b6599cc36b7486107fc0c5915c528ab", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/kmermask_em-81851e95b94381fb
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "9e36a0fd1e23876b8d1dad8056f8465b7b6599cc36b7486107fc0c5915c528ab", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9e36a0fd1e23876b8d1dad8056f8465b7b6599cc36b7486107fc0c5915c528ab", kill_on_drop: false }`
[INFO] [stdout] 9e36a0fd1e23876b8d1dad8056f8465b7b6599cc36b7486107fc0c5915c528ab