[INFO] cloning repository https://github.com/MikkelSchubert/crispy
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MikkelSchubert/crispy" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMikkelSchubert%2Fcrispy", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMikkelSchubert%2Fcrispy'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] a2199a853d104f2c76db2150825954240b27d9a8
[INFO] testing MikkelSchubert/crispy against beta-2021-01-01 for beta-1.50-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMikkelSchubert%2Fcrispy" "/workspace/builds/worker-9/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-9/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/MikkelSchubert/crispy on toolchain beta-2021-01-01
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/MikkelSchubert/crispy
[INFO] finished tweaking git repo https://github.com/MikkelSchubert/crispy
[INFO] tweaked toml for git repo https://github.com/MikkelSchubert/crispy written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] crate git repo https://github.com/MikkelSchubert/crispy already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bit-vec v0.5.1
[INFO] [stderr]   Downloaded indicatif v0.12.0
[INFO] [stderr]   Downloaded bit-set v0.5.1
[INFO] [stderr]   Downloaded bio-types v0.5.1
[INFO] [stderr]   Downloaded strum v0.13.0
[INFO] [stderr]   Downloaded strum_macros v0.13.0
[INFO] [stderr]   Downloaded bv v0.10.0
[INFO] [stderr]   Downloaded bio v0.28.2
[INFO] [stderr]   Downloaded console v0.9.0
[INFO] [stderr]   Downloaded bytecount v0.3.2
[INFO] [stderr]   Downloaded feature-probe v0.1.1
[INFO] [stderr]   Downloaded statrs v0.9.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 3b8bf6446fcc91c49a538da5c9350cbfbe80d5c59c17d834bb1d0b6d74da277f
[INFO] running `Command { std: "docker" "start" "-a" "3b8bf6446fcc91c49a538da5c9350cbfbe80d5c59c17d834bb1d0b6d74da277f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3b8bf6446fcc91c49a538da5c9350cbfbe80d5c59c17d834bb1d0b6d74da277f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3b8bf6446fcc91c49a538da5c9350cbfbe80d5c59c17d834bb1d0b6d74da277f", kill_on_drop: false }`
[INFO] [stdout] 3b8bf6446fcc91c49a538da5c9350cbfbe80d5c59c17d834bb1d0b6d74da277f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] eaa7d0c7d2f387e60fcdd9df1a1473306b4bebf88a6f39a59aefb8a9fbef95a0
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "eaa7d0c7d2f387e60fcdd9df1a1473306b4bebf88a6f39a59aefb8a9fbef95a0", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.62
[INFO] [stderr]    Compiling autocfg v0.1.6
[INFO] [stderr]    Compiling proc-macro2 v1.0.5
[INFO] [stderr]    Compiling syn v1.0.5
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling serde v1.0.101
[INFO] [stderr]    Compiling arrayvec v0.4.12
[INFO] [stderr]    Compiling regex-syntax v0.6.12
[INFO] [stderr]    Compiling cc v1.0.45
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling rayon-core v1.6.0
[INFO] [stderr]    Compiling bitflags v1.2.0
[INFO] [stderr]    Compiling bit-vec v0.5.1
[INFO] [stderr]    Compiling ordermap v0.3.5
[INFO] [stderr]    Compiling bio v0.28.2
[INFO] [stderr]    Compiling strum v0.13.0
[INFO] [stderr]    Compiling bytecount v0.3.2
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling error-chain v0.12.1
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling bv v0.10.0
[INFO] [stderr]    Compiling bit-set v0.5.1
[INFO] [stderr]    Compiling num-traits v0.2.8
[INFO] [stderr]    Compiling num-complex v0.2.3
[INFO] [stderr]    Compiling num-integer v0.1.41
[INFO] [stderr]    Compiling petgraph v0.4.13
[INFO] [stderr]    Compiling memoffset v0.5.1
[INFO] [stderr]    Compiling regex-automata v0.1.8
[INFO] [stderr]    Compiling quote v1.0.2
[INFO] [stderr]    Compiling crossbeam-epoch v0.7.2
[INFO] [stderr]    Compiling backtrace-sys v0.1.31
[INFO] [stderr]    Compiling rand v0.4.6
[INFO] [stderr]    Compiling num_cpus v1.10.1
[INFO] [stderr]    Compiling clicolors-control v1.0.1
[INFO] [stderr]    Compiling termios v0.3.1
[INFO] [stderr]    Compiling atty v0.2.13
[INFO] [stderr]    Compiling crossbeam-deque v0.7.1
[INFO] [stderr]    Compiling aho-corasick v0.7.6
[INFO] [stderr]    Compiling csv-core v0.1.6
[INFO] [stderr]    Compiling ordered-float v1.0.2
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling backtrace v0.3.38
[INFO] [stderr]    Compiling rand v0.3.23
[INFO] [stderr]    Compiling statrs v0.9.0
[INFO] [stderr]    Compiling regex v1.3.1
[INFO] [stderr]    Compiling rayon v1.2.0
[INFO] [stderr]    Compiling console v0.9.0
[INFO] [stderr]    Compiling indicatif v0.12.0
[INFO] [stderr]    Compiling serde_derive v1.0.101
[INFO] [stderr]    Compiling strum_macros v0.13.0
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling bstr v0.2.8
[INFO] [stderr]    Compiling bio-types v0.5.1
[INFO] [stderr]    Compiling multimap v0.4.0
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling csv v1.1.1
[INFO] [stderr]    Compiling crispyr v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 38s
[INFO] running `Command { std: "docker" "inspect" "eaa7d0c7d2f387e60fcdd9df1a1473306b4bebf88a6f39a59aefb8a9fbef95a0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "eaa7d0c7d2f387e60fcdd9df1a1473306b4bebf88a6f39a59aefb8a9fbef95a0", kill_on_drop: false }`
[INFO] [stdout] eaa7d0c7d2f387e60fcdd9df1a1473306b4bebf88a6f39a59aefb8a9fbef95a0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 3d34e662fdb4e52420e92494dd27a10ebedff1081b47ddaa67f1df16250d3ee4
[INFO] running `Command { std: "docker" "start" "-a" "3d34e662fdb4e52420e92494dd27a10ebedff1081b47ddaa67f1df16250d3ee4", kill_on_drop: false }`
[INFO] [stderr]    Compiling crispyr v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 10.09s
[INFO] running `Command { std: "docker" "inspect" "3d34e662fdb4e52420e92494dd27a10ebedff1081b47ddaa67f1df16250d3ee4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3d34e662fdb4e52420e92494dd27a10ebedff1081b47ddaa67f1df16250d3ee4", kill_on_drop: false }`
[INFO] [stdout] 3d34e662fdb4e52420e92494dd27a10ebedff1081b47ddaa67f1df16250d3ee4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 47803c79b18e4e3cf24cb4351f988e381980d2483b4a59ce1ecc968299b4e5ce
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "47803c79b18e4e3cf24cb4351f988e381980d2483b4a59ce1ecc968299b4e5ce", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.17s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/crispyr-a10fcc3dcfc6d5d5
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/crispyr-e96653c17f9cd15d
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/enzyme-b90a3b71412b83c3
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test test_enzyme_cas9 ... ok
[INFO] [stdout] test test_enzyme_unknown ... ok
[INFO] [stdout] test test_enzyme_mad7 ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/index-d0ea7df786ac664f
[INFO] [stdout] 
[INFO] [stdout] running 12 tests
[INFO] [stdout] test test_position_to_u64_forward_neg_pos_no_ref ... ok
[INFO] [stdout] test test_position_to_u64_forward_pos_and_ref ... ok
[INFO] [stdout] test test_position_to_u64_forward_ref_no_pos ... ok
[INFO] [stdout] test test_position_to_u64_forward_pos_no_ref ... ok
[INFO] [stdout] test test_position_to_u64_forward_zeroes ... ok
[INFO] [stdout] test test_position_to_u64_reverse_pos_no_ref ... ok
[INFO] [stdout] test test_position_to_u64_reverse_ref_no_pos ... ok
[INFO] [stdout] test test_position_to_u64_reverse_pos_and_ref ... ok
[INFO] [stdout] test test_position_to_u64_forward_neg_pos_and_ref ... ok
[INFO] [stdout] test test_position_to_u64_reverse_neg_pos_and_ref ... ok
[INFO] [stdout] test test_position_to_u64_reverse_neg_pos_no_ref ... ok
[INFO] [stdout] test test_position_to_u64_reverse_zeroes ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 12 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/iupac-364d0d45cb26354a
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test test_degenerate_nucleotide ... ok
[INFO] [stdout] test test_non_nucleotide_values ... ok
[INFO] [stdout] test test_basic_nucleotides ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/pam-eb8eb1bb696699ef
[INFO] [stdout] 
[INFO] [stdout] running 11 tests
[INFO] [stdout] test test_empty_head_pam_kmer_slice ... ok
[INFO] [stdout] test test_tail_pam_matches ... ok
[INFO] [stdout] test test_to_string ... ok
[INFO] [stdout] test test_head_kmer ... ok
[INFO] [stdout] test test_empty_head_pam_matches ... ok
[INFO] [stdout] test test_pam_lengths ... ok
[INFO] [stdout] test test_head_pam_matches ... ok
[INFO] [stdout] test test_tail_kmer ... ok
[INFO] [stdout] test test_pam_position ... ok
[INFO] [stdout] test test_empty_tail_pam_kmer_slice ... ok
[INFO] [stdout] test test_empty_tail_pam_matches ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 11 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests crispyr
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "47803c79b18e4e3cf24cb4351f988e381980d2483b4a59ce1ecc968299b4e5ce", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "47803c79b18e4e3cf24cb4351f988e381980d2483b4a59ce1ecc968299b4e5ce", kill_on_drop: false }`
[INFO] [stdout] 47803c79b18e4e3cf24cb4351f988e381980d2483b4a59ce1ecc968299b4e5ce