[INFO] cloning repository https://github.com/HopedWall/rs-cactusgraph [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/HopedWall/rs-cactusgraph" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2Frs-cactusgraph", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2Frs-cactusgraph'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 26d211428a201ecbb24678357fe2c3f0fb9eb9b3 [INFO] testing HopedWall/rs-cactusgraph against beta-2021-01-01 for beta-1.50-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2Frs-cactusgraph" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/HopedWall/rs-cactusgraph on toolchain beta-2021-01-01 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/HopedWall/rs-cactusgraph [INFO] finished tweaking git repo https://github.com/HopedWall/rs-cactusgraph [INFO] tweaked toml for git repo https://github.com/HopedWall/rs-cactusgraph written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/HopedWall/rs-cactusgraph already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2021-01-01" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating git repository `https://github.com/chfi/rs-3-edge` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded bstr v0.2.13 [INFO] [stderr] Downloaded gfa v0.2.3 [INFO] [stderr] Downloaded structopt v0.3.16 [INFO] [stderr] Downloaded structopt-derive v0.4.9 [INFO] [stderr] Downloaded gfa v0.5.0 [INFO] [stderr] Downloaded handlegraph v0.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 275b43359ebf02258caf69795709cb649bb05cc1a80e4b14e741f96730eb90c1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "275b43359ebf02258caf69795709cb649bb05cc1a80e4b14e741f96730eb90c1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "275b43359ebf02258caf69795709cb649bb05cc1a80e4b14e741f96730eb90c1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "275b43359ebf02258caf69795709cb649bb05cc1a80e4b14e741f96730eb90c1", kill_on_drop: false }` [INFO] [stdout] 275b43359ebf02258caf69795709cb649bb05cc1a80e4b14e741f96730eb90c1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b4c55989d096a0e3ff121d6ad466c7977a54d985f790fd162916ab370c494528 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b4c55989d096a0e3ff121d6ad466c7977a54d985f790fd162916ab370c494528", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling syn v1.0.38 [INFO] [stderr] Compiling libc v0.2.76 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling lexical-core v0.7.4 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Compiling arrayvec v0.5.1 [INFO] [stderr] Compiling static_assertions v1.1.0 [INFO] [stderr] Compiling fixedbitset v0.2.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling hashbrown v0.8.2 [INFO] [stderr] Compiling indexmap v1.5.1 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling gfa v0.5.0 [INFO] [stderr] Compiling structopt-derive v0.4.9 [INFO] [stderr] Compiling gfa v0.2.3 [INFO] [stderr] Compiling handlegraph v0.2.0 [INFO] [stderr] Compiling structopt v0.3.16 [INFO] [stderr] Compiling three-edge-connected v0.1.0 (https://github.com/chfi/rs-3-edge#d2b6e5a4) [INFO] [stderr] Compiling rs-cactusgraph v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `handlegraph::hashgraph::*` [INFO] [stdout] --> src/biedged_to_cactus.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use handlegraph::hashgraph::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::path::PathBuf` [INFO] [stdout] --> src/biedged_to_cactus.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::path::PathBuf; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gfa::parser::parse_gfa` [INFO] [stdout] --> src/biedged_to_cactus.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use gfa::parser::parse_gfa; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/biedged_to_cactus.rs:67:53 [INFO] [stdout] | [INFO] [stdout] 67 | component.iter().enumerate().for_each(|(i, j)| { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `loop_edges` is never read [INFO] [stdout] --> src/biedged_to_cactus.rs:151:9 [INFO] [stdout] | [INFO] [stdout] 151 | let mut loop_edges: Vec> = Vec::new(); [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_assignments)]` on by default [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `removed` [INFO] [stdout] --> src/biedgedgraph.rs:115:17 [INFO] [stdout] | [INFO] [stdout] 115 | let removed = self.graph.remove_node(id); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_removed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `removed_edges` is never read [INFO] [stdout] --> src/biedgedgraph.rs:131:13 [INFO] [stdout] | [INFO] [stdout] 131 | let mut removed_edges: Vec = Vec::new(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `nodeId` should have a snake case name [INFO] [stdout] --> src/biedged_to_cactus.rs:85:9 [INFO] [stdout] | [INFO] [stdout] 85 | for nodeId in component { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `node_id` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 04s [INFO] running `Command { std: "docker" "inspect" "b4c55989d096a0e3ff121d6ad466c7977a54d985f790fd162916ab370c494528", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b4c55989d096a0e3ff121d6ad466c7977a54d985f790fd162916ab370c494528", kill_on_drop: false }` [INFO] [stdout] b4c55989d096a0e3ff121d6ad466c7977a54d985f790fd162916ab370c494528 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 0a66eabea493f7e4272f8cc11b316dbe8d6757f3a0cf4aa91a307381f959f522 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "0a66eabea493f7e4272f8cc11b316dbe8d6757f3a0cf4aa91a307381f959f522", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling rs-cactusgraph v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `handlegraph::hashgraph::*` [INFO] [stdout] --> src/biedged_to_cactus.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use handlegraph::hashgraph::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::path::PathBuf` [INFO] [stdout] --> src/biedged_to_cactus.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::path::PathBuf; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gfa::parser::parse_gfa` [INFO] [stdout] --> src/biedged_to_cactus.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use gfa::parser::parse_gfa; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/biedged_to_cactus.rs:67:53 [INFO] [stdout] | [INFO] [stdout] 67 | component.iter().enumerate().for_each(|(i, j)| { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `loop_edges` is never read [INFO] [stdout] --> src/biedged_to_cactus.rs:151:9 [INFO] [stdout] | [INFO] [stdout] 151 | let mut loop_edges: Vec> = Vec::new(); [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_assignments)]` on by default [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `removed` [INFO] [stdout] --> src/biedgedgraph.rs:115:17 [INFO] [stdout] | [INFO] [stdout] 115 | let removed = self.graph.remove_node(id); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_removed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `removed_edges` is never read [INFO] [stdout] --> src/biedgedgraph.rs:131:13 [INFO] [stdout] | [INFO] [stdout] 131 | let mut removed_edges: Vec = Vec::new(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `nodeId` should have a snake case name [INFO] [stdout] --> src/biedged_to_cactus.rs:85:9 [INFO] [stdout] | [INFO] [stdout] 85 | for nodeId in component { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `node_id` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `handlegraph::hashgraph::*` [INFO] [stdout] --> src/biedged_to_cactus.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use handlegraph::hashgraph::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::path::PathBuf` [INFO] [stdout] --> src/biedged_to_cactus.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::path::PathBuf; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gfa::parser::parse_gfa` [INFO] [stdout] --> src/biedged_to_cactus.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use gfa::parser::parse_gfa; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::biedgedgraph::*` [INFO] [stdout] --> src/biedged_to_cactus.rs:161:9 [INFO] [stdout] | [INFO] [stdout] 161 | use crate::biedgedgraph::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/biedged_to_cactus.rs:67:53 [INFO] [stdout] | [INFO] [stdout] 67 | component.iter().enumerate().for_each(|(i, j)| { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `loop_edges` is never read [INFO] [stdout] --> src/biedged_to_cactus.rs:151:9 [INFO] [stdout] | [INFO] [stdout] 151 | let mut loop_edges: Vec> = Vec::new(); [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_assignments)]` on by default [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `removed` [INFO] [stdout] --> src/biedgedgraph.rs:115:17 [INFO] [stdout] | [INFO] [stdout] 115 | let removed = self.graph.remove_node(id); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_removed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `removed_edges` is never read [INFO] [stdout] --> src/biedgedgraph.rs:131:13 [INFO] [stdout] | [INFO] [stdout] 131 | let mut removed_edges: Vec = Vec::new(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `nodeId` should have a snake case name [INFO] [stdout] --> src/biedged_to_cactus.rs:85:9 [INFO] [stdout] | [INFO] [stdout] 85 | for nodeId in component { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `node_id` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.96s [INFO] running `Command { std: "docker" "inspect" "0a66eabea493f7e4272f8cc11b316dbe8d6757f3a0cf4aa91a307381f959f522", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0a66eabea493f7e4272f8cc11b316dbe8d6757f3a0cf4aa91a307381f959f522", kill_on_drop: false }` [INFO] [stdout] 0a66eabea493f7e4272f8cc11b316dbe8d6757f3a0cf4aa91a307381f959f522 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2021-01-01" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] cbb926670455ba08438c2b09099323c1c7c363cfc6146d0c99a2d9608c0a9d79 [INFO] running `Command { std: "docker" "start" "-a" "cbb926670455ba08438c2b09099323c1c7c363cfc6146d0c99a2d9608c0a9d79", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] warning: unused import: `handlegraph::hashgraph::*` [INFO] [stderr] --> src/biedged_to_cactus.rs:3:5 [INFO] [stderr] | [INFO] [stderr] 3 | use handlegraph::hashgraph::*; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::path::PathBuf` [INFO] [stderr] --> src/biedged_to_cactus.rs:6:5 [INFO] [stderr] | [INFO] [stderr] 6 | use std::path::PathBuf; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `gfa::parser::parse_gfa` [INFO] [stderr] --> src/biedged_to_cactus.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use gfa::parser::parse_gfa; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `i` [INFO] [stderr] --> src/biedged_to_cactus.rs:67:53 [INFO] [stderr] | [INFO] [stderr] 67 | component.iter().enumerate().for_each(|(i, j)| { [INFO] [stderr] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: value assigned to `loop_edges` is never read [INFO] [stderr] --> src/biedged_to_cactus.rs:151:9 [INFO] [stderr] | [INFO] [stderr] 151 | let mut loop_edges: Vec> = Vec::new(); [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_assignments)]` on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `removed` [INFO] [stderr] --> src/biedgedgraph.rs:115:17 [INFO] [stderr] | [INFO] [stderr] 115 | let removed = self.graph.remove_node(id); [INFO] [stderr] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_removed` [INFO] [stderr] [INFO] [stderr] warning: value assigned to `removed_edges` is never read [INFO] [stderr] --> src/biedgedgraph.rs:131:13 [INFO] [stderr] | [INFO] [stderr] 131 | let mut removed_edges: Vec = Vec::new(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: variable `nodeId` should have a snake case name [INFO] [stderr] --> src/biedged_to_cactus.rs:85:9 [INFO] [stderr] | [INFO] [stderr] 85 | for nodeId in component { [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `node_id` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 8 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: unused import: `handlegraph::hashgraph::*` [INFO] [stderr] --> src/biedged_to_cactus.rs:3:5 [INFO] [stderr] | [INFO] [stderr] 3 | use handlegraph::hashgraph::*; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::path::PathBuf` [INFO] [stderr] --> src/biedged_to_cactus.rs:6:5 [INFO] [stderr] | [INFO] [stderr] 6 | use std::path::PathBuf; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `gfa::parser::parse_gfa` [INFO] [stderr] --> src/biedged_to_cactus.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use gfa::parser::parse_gfa; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `crate::biedgedgraph::*` [INFO] [stderr] --> src/biedged_to_cactus.rs:161:9 [INFO] [stderr] | [INFO] [stderr] 161 | use crate::biedgedgraph::*; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `i` [INFO] [stderr] --> src/biedged_to_cactus.rs:67:53 [INFO] [stderr] | [INFO] [stderr] 67 | component.iter().enumerate().for_each(|(i, j)| { [INFO] [stderr] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: value assigned to `loop_edges` is never read [INFO] [stderr] --> src/biedged_to_cactus.rs:151:9 [INFO] [stderr] | [INFO] [stderr] 151 | let mut loop_edges: Vec> = Vec::new(); [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_assignments)]` on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `removed` [INFO] [stderr] --> src/biedgedgraph.rs:115:17 [INFO] [stderr] | [INFO] [stderr] 115 | let removed = self.graph.remove_node(id); [INFO] [stderr] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_removed` [INFO] [stderr] [INFO] [stderr] warning: value assigned to `removed_edges` is never read [INFO] [stderr] --> src/biedgedgraph.rs:131:13 [INFO] [stderr] | [INFO] [stderr] 131 | let mut removed_edges: Vec = Vec::new(); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: variable `nodeId` should have a snake case name [INFO] [stderr] --> src/biedged_to_cactus.rs:85:9 [INFO] [stderr] | [INFO] [stderr] 85 | for nodeId in component { [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `node_id` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 9 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.12s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rs_cactusgraph-dc99c9744a2d6181 [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test biedgedgraph::tests::test_add_node ... ok [INFO] [stdout] test biedgedgraph::tests::test_contract_all_gray_edges ... ok [INFO] [stdout] test biedgedgraph::tests::test_remove_node ... ok [INFO] [stdout] test biedgedgraph::tests::test_remove_node_and_adjacent_edges ... ok [INFO] [stdout] test biedgedgraph::tests::test_remove_nodes_incident_with_edge ... ok [INFO] [stdout] test biedgedgraph::tests::test_add_edge ... ok [INFO] [stdout] test biedgedgraph::tests::test_remove_edge ... ok [INFO] [stdout] test biedgedgraph::tests::test_get_nodes ... ok [INFO] [stdout] test biedgedgraph::tests::test_remove_edges_adjacent_to_node ... ok [INFO] [stdout] test biedgedgraph::tests::test_new ... ok [INFO] [stdout] test biedgedgraph::tests::test_contract_edge ... ok [INFO] [stdout] test biedgedgraph::tests::test_get_adjacent_nodes ... ok [INFO] [stdout] test biedged_to_cactus::tests::test_contract_all_gray_edges_paper ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- biedged_to_cactus::tests::test_contract_all_gray_edges_paper stdout ---- [INFO] [stdout] thread 'biedged_to_cactus::tests::test_contract_all_gray_edges_paper' panicked at 'Is insted: 15', src/biedged_to_cactus.rs:273:9 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x558a0fe60147 - std::backtrace_rs::backtrace::libunwind::trace::hcd6e187547b8deec [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x558a0fe60147 - std::backtrace_rs::backtrace::trace_unsynchronized::hde10036eb783fbc7 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x558a0fe60147 - std::sys_common::backtrace::_print_fmt::h63987b8f86dfc82a [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x558a0fe60147 - ::fmt::hc33f3ac4cc9c4196 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x558a0fe801dc - core::fmt::write::hfdcdeb08fb2b3afa [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x558a0fe5c5c2 - std::io::Write::write_fmt::h28c53dc51251a293 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x558a0fe623f5 - std::sys_common::backtrace::_print::hf179508b01f66878 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x558a0fe623f5 - std::sys_common::backtrace::print::ha97d11adb39266a6 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x558a0fe623f5 - std::panicking::default_hook::{{closure}}::h8da9985a98bd1582 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x558a0fe61f82 - std::panicking::default_hook::hbc0ee792993c2ef2 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x558a0fe62b91 - std::panicking::rust_panic_with_hook::h9fb9cda33a10f084 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x558a0fe626d7 - std::panicking::begin_panic_handler::{{closure}}::hf3e83396e085962e [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x558a0fe6060c - std::sys_common::backtrace::__rust_end_short_backtrace::hac151ac4c1e3252d [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x558a0fe62639 - rust_begin_unwind [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x558a0fe625eb - std::panicking::begin_panic_fmt::h01a0df196b065ae4 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:435:5 [INFO] [stdout] 15: 0x558a0fdf61d7 - rs_cactusgraph::biedged_to_cactus::tests::test_contract_all_gray_edges_paper::hd6a1300df45bb615 [INFO] [stdout] at /opt/rustwide/workdir/src/biedged_to_cactus.rs:273:9 [INFO] [stdout] 16: 0x558a0fdf602a - rs_cactusgraph::biedged_to_cactus::tests::test_contract_all_gray_edges_paper::{{closure}}::hf1b77db6cb7b2180 [INFO] [stdout] at /opt/rustwide/workdir/src/biedged_to_cactus.rs:269:5 [INFO] [stdout] 17: 0x558a0fddeeae - core::ops::function::FnOnce::call_once::hafaf21633f619766 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 18: 0x558a0fe1ffc3 - core::ops::function::FnOnce::call_once::ha61d5393ae51ae22 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x558a0fe1ffc3 - test::__rust_begin_short_backtrace::h4a8691b5281c1f3b [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/test/src/lib.rs:516:5 [INFO] [stdout] 20: 0x558a0fe1e8b6 - as core::ops::function::FnOnce>::call_once::hd25ba61494055ad3 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/alloc/src/boxed.rs:1328:9 [INFO] [stdout] 21: 0x558a0fe1e8b6 - as core::ops::function::FnOnce<()>>::call_once::h052fde7b846767ba [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panic.rs:322:9 [INFO] [stdout] 22: 0x558a0fe1e8b6 - std::panicking::try::do_call::h04571a1da6838ba1 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:379:40 [INFO] [stdout] 23: 0x558a0fe1e8b6 - std::panicking::try::h758f090614125cbe [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:343:19 [INFO] [stdout] 24: 0x558a0fe1e8b6 - std::panic::catch_unwind::h0c48513d5a021d3c [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panic.rs:396:14 [INFO] [stdout] 25: 0x558a0fe1e8b6 - test::run_test_in_process::hee75babaaac3822f [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/test/src/lib.rs:538:18 [INFO] [stdout] 26: 0x558a0fe1e8b6 - test::run_test::run_test_inner::{{closure}}::h2920dea75d7f0c1e [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/test/src/lib.rs:449:39 [INFO] [stdout] 27: 0x558a0fdf6bc6 - std::sys_common::backtrace::__rust_begin_short_backtrace::ha23dff608830db13 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 28: 0x558a0fdfb95d - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hacce322dead3a799 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 29: 0x558a0fdfb95d - as core::ops::function::FnOnce<()>>::call_once::h4f0bc9c26ead0a27 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panic.rs:322:9 [INFO] [stdout] 30: 0x558a0fdfb95d - std::panicking::try::do_call::h1b9f282fb0c383b3 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:379:40 [INFO] [stdout] 31: 0x558a0fdfb95d - std::panicking::try::hed1ebed51b133ee4 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panicking.rs:343:19 [INFO] [stdout] 32: 0x558a0fdfb95d - std::panic::catch_unwind::h072a2b19fd39a474 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/panic.rs:396:14 [INFO] [stdout] 33: 0x558a0fdfb95d - std::thread::Builder::spawn_unchecked::{{closure}}::hb02c6b2d3ff18bc2 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 34: 0x558a0fdfb95d - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb512c5d27b4adb83 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 35: 0x558a0fe686ea - as core::ops::function::FnOnce>::call_once::hdbb9ff71143eaad6 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/alloc/src/boxed.rs:1328:9 [INFO] [stdout] 36: 0x558a0fe686ea - as core::ops::function::FnOnce>::call_once::h9dbde95cefb8368c [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/alloc/src/boxed.rs:1328:9 [INFO] [stdout] 37: 0x558a0fe686ea - std::sys::unix::thread::Thread::new::thread_start::hc76032c38affd972 [INFO] [stdout] at /rustc/25b3db3aa752d9d4633c983c9d4bf5e48f9baff1/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 38: 0x7ffbf46a2609 - start_thread [INFO] [stdout] 39: 0x7ffbf4474293 - clone [INFO] [stdout] 40: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] biedged_to_cactus::tests::test_contract_all_gray_edges_paper [INFO] [stdout] [INFO] [stdout] test result: FAILED. 12 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "cbb926670455ba08438c2b09099323c1c7c363cfc6146d0c99a2d9608c0a9d79", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cbb926670455ba08438c2b09099323c1c7c363cfc6146d0c99a2d9608c0a9d79", kill_on_drop: false }` [INFO] [stdout] cbb926670455ba08438c2b09099323c1c7c363cfc6146d0c99a2d9608c0a9d79