[INFO] fetching crate netcdf-src 0.1.3... [INFO] testing netcdf-src-0.1.3 against 1.49.0 for beta-1.50-1 [INFO] extracting crate netcdf-src 0.1.3 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate netcdf-src 0.1.3 on toolchain 1.49.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate netcdf-src 0.1.3 [INFO] finished tweaking crates.io crate netcdf-src 0.1.3 [INFO] tweaked toml for crates.io crate netcdf-src 0.1.3 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4faa1052120a8296623a24b4b4a53a7a05cb9800ccb0295a68206181033e08f8 [INFO] running `Command { std: "docker" "start" "-a" "4faa1052120a8296623a24b4b4a53a7a05cb9800ccb0295a68206181033e08f8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4faa1052120a8296623a24b4b4a53a7a05cb9800ccb0295a68206181033e08f8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4faa1052120a8296623a24b4b4a53a7a05cb9800ccb0295a68206181033e08f8", kill_on_drop: false }` [INFO] [stdout] 4faa1052120a8296623a24b4b4a53a7a05cb9800ccb0295a68206181033e08f8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 72cef51f8ec6c5f20a9395f71199417a5a4ff0cda0cde8c6bce5936f580fd591 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "72cef51f8ec6c5f20a9395f71199417a5a4ff0cda0cde8c6bce5936f580fd591", kill_on_drop: false }` [INFO] [stderr] Compiling hdf5-src v0.7.0 [INFO] [stderr] Compiling netcdf-src v0.1.3 (/opt/rustwide/workdir) [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-210d8644c6b014f6/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x557c6b2855c0 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stderr] 1: 0x557c6b2855c0 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x557c6b2855c0 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x557c6b2855c0 - ::fmt::he009dcaaa75eed60 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x557c6b2a447c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stderr] 5: 0x557c6b282242 - std::io::Write::write_fmt::heb7e50902e98831c [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stderr] 6: 0x557c6b287a85 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x557c6b287a85 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x557c6b287a85 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x557c6b287728 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:227:9 [INFO] [stderr] 10: 0x557c6b288221 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stderr] 11: 0x557c6b1743ee - std::panicking::begin_panic::{{closure}}::hea87162b4b823565 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:522:9 [INFO] [stderr] 12: 0x557c6b1b59c9 - std::sys_common::backtrace::__rust_end_short_backtrace::h5b9fa7413ad27774 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x557c6b17431b - std::panicking::begin_panic::h511cb4b89dad4a3d [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:521:12 [INFO] [stderr] 14: 0x557c6b05d06b - build_script_build::LibrarySearcher::try_locate_hdf5_library::h592ddb0c6c230588 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x557c6b05e8d3 - build_script_build::main::h604223ec83c93621 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x557c6b06505b - core::ops::function::FnOnce::call_once::h9a07054c1a06b439 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x557c6b06bb3e - std::sys_common::backtrace::__rust_begin_short_backtrace::h918d037acd40987a [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x557c6b069bd1 - std::rt::lang_start::{{closure}}::h622d00b3aaa36155 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x557c6b288647 - core::ops::function::impls:: for &F>::call_once::h57e2a071d427b24c [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x557c6b288647 - std::panicking::try::do_call::h81cbbe0c3b30a28e [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stderr] 21: 0x557c6b288647 - std::panicking::try::hbeeb95b4e1f0a876 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stderr] 22: 0x557c6b288647 - std::panic::catch_unwind::h59c48ccb40a0bf20 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stderr] 23: 0x557c6b288647 - std::rt::lang_start_internal::ha53ab63f88fee728 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x557c6b069ba7 - std::rt::lang_start::h9d8f5e4290eb2560 [INFO] [stderr] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x557c6b05ff1a - main [INFO] [stderr] 26: 0x7fa556f460b3 - __libc_start_main [INFO] [stderr] 27: 0x557c6b0580be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "72cef51f8ec6c5f20a9395f71199417a5a4ff0cda0cde8c6bce5936f580fd591", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "72cef51f8ec6c5f20a9395f71199417a5a4ff0cda0cde8c6bce5936f580fd591", kill_on_drop: false }` [INFO] [stdout] 72cef51f8ec6c5f20a9395f71199417a5a4ff0cda0cde8c6bce5936f580fd591