[INFO] fetching crate global-supertrees 0.1.0... [INFO] testing global-supertrees-0.1.0 against 1.49.0 for beta-1.50-1 [INFO] extracting crate global-supertrees 0.1.0 into /workspace/builds/worker-2/source [INFO] validating manifest of crates.io crate global-supertrees 0.1.0 on toolchain 1.49.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate global-supertrees 0.1.0 [INFO] finished tweaking crates.io crate global-supertrees 0.1.0 [INFO] tweaked toml for crates.io crate global-supertrees 0.1.0 written to /workspace/builds/worker-2/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 0ddf98a0b1eaa9eef7ec9b51ec12a5a136f92316e72ef99f7c3b36c03612e926 [INFO] running `Command { std: "docker" "start" "-a" "0ddf98a0b1eaa9eef7ec9b51ec12a5a136f92316e72ef99f7c3b36c03612e926", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0ddf98a0b1eaa9eef7ec9b51ec12a5a136f92316e72ef99f7c3b36c03612e926", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0ddf98a0b1eaa9eef7ec9b51ec12a5a136f92316e72ef99f7c3b36c03612e926", kill_on_drop: false }` [INFO] [stdout] 0ddf98a0b1eaa9eef7ec9b51ec12a5a136f92316e72ef99f7c3b36c03612e926 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 064d2bbb04daa7dbe97030964c6a4691ac9476ebc2c2bbf8e6da0d6acd08aa29 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "064d2bbb04daa7dbe97030964c6a4691ac9476ebc2c2bbf8e6da0d6acd08aa29", kill_on_drop: false }` [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:54:92 [INFO] [stdout] | [INFO] [stdout] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:61:82 [INFO] [stdout] | [INFO] [stdout] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/tree_merging.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `trees` [INFO] [stdout] --> src/main.rs:98:9 [INFO] [stdout] | [INFO] [stdout] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | let distance_matrices: Vec = [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `merge_distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:102:4 [INFO] [stdout] | [INFO] [stdout] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 12.12s [INFO] running `Command { std: "docker" "inspect" "064d2bbb04daa7dbe97030964c6a4691ac9476ebc2c2bbf8e6da0d6acd08aa29", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "064d2bbb04daa7dbe97030964c6a4691ac9476ebc2c2bbf8e6da0d6acd08aa29", kill_on_drop: false }` [INFO] [stdout] 064d2bbb04daa7dbe97030964c6a4691ac9476ebc2c2bbf8e6da0d6acd08aa29 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d69ae1d7d2681c987de7d5a30de24d978d8a359de7be948523c8e25a39037d15 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d69ae1d7d2681c987de7d5a30de24d978d8a359de7be948523c8e25a39037d15", kill_on_drop: false }` [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:54:92 [INFO] [stdout] | [INFO] [stdout] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/utils.rs:61:82 [INFO] [stdout] | [INFO] [stdout] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stdout] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/tree_merging.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `trees` [INFO] [stdout] --> src/main.rs:98:9 [INFO] [stdout] | [INFO] [stdout] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:10:9 [INFO] [stdout] | [INFO] [stdout] 10 | let distance_matrices: Vec = [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `merge_distance_matrices` [INFO] [stdout] --> src/tree_merging.rs:102:4 [INFO] [stdout] | [INFO] [stdout] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.76s [INFO] running `Command { std: "docker" "inspect" "d69ae1d7d2681c987de7d5a30de24d978d8a359de7be948523c8e25a39037d15", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d69ae1d7d2681c987de7d5a30de24d978d8a359de7be948523c8e25a39037d15", kill_on_drop: false }` [INFO] [stdout] d69ae1d7d2681c987de7d5a30de24d978d8a359de7be948523c8e25a39037d15 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] cdba24be75f672763be24c4d2fed31a3b3b13aa99841b0b1c44d11e0e773ea53 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "cdba24be75f672763be24c4d2fed31a3b3b13aa99841b0b1c44d11e0e773ea53", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/global_supertrees-4499ae9085591e1f [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test tests::tests::test_load_tree_file ... ok [INFO] [stdout] test tests::tests::test_find_first_zero ... ok [INFO] [stdout] test tests::tests::test_find_first_common_ancestor ... ok [INFO] [stdout] test tests::tests::test_to_dot ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok [INFO] [stdout] test tests::tests::test_get_levels_from_root ... ok [INFO] [stdout] test tests::tests::test_batch_id_tax_mapping ... FAILED [INFO] [stdout] test tests::tests::test_merge_organisms ... FAILED [INFO] [stdout] test tests::tests::test_get_partial_tree ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium_nested ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_simple ... ok [INFO] [stdout] test tests::tests::test_tree_merging ... ok [INFO] [stdout] test tests::tests::test_neighbour_joining ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_batch_id_tax_mapping stdout ---- [INFO] [stdout] thread 'tests::tests::test_batch_id_tax_mapping' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:34 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56375d0552b0 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x56375d0552b0 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x56375d0552b0 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x56375d0552b0 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x56375d07a99c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x56375cdc3716 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x56375d04ee2d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x56375d0579d5 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x56375d0579d5 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x56375d0579d5 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x56375d057622 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x56375d058171 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x56375d057cb7 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x56375d05576c - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x56375d057c19 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x56375d078621 - core::panicking::panic_fmt::ha0bb065d9a260792 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/panicking.rs:92:14 [INFO] [stdout] 16: 0x56375d078443 - core::option::expect_none_failed::h7e1dd0a94971eb61 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/option.rs:1268:5 [INFO] [stdout] 17: 0x56375cdb7529 - core::result::Result::expect::hde3af1c7a1eeb942 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/result.rs:933:23 [INFO] [stdout] 18: 0x56375cd9fd01 - global_supertrees::uniprot::load_mapping_file::h8d2ebae78ca8f77b [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:34:13 [INFO] [stdout] 19: 0x56375cdb5ba3 - global_supertrees::tests::tests::test_batch_id_tax_mapping::hd0c31b423de18516 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:230:26 [INFO] [stdout] 20: 0x56375cdb5a7a - global_supertrees::tests::tests::test_batch_id_tax_mapping::{{closure}}::h46d70427e2fdfcf0 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:227:5 [INFO] [stdout] 21: 0x56375cd8a2ce - core::ops::function::FnOnce::call_once::h57d139c44ecca08b [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x56375cdeb263 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x56375cdeb263 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 24: 0x56375cde970a - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 25: 0x56375cde970a - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 26: 0x56375cde970a - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 27: 0x56375cde970a - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 28: 0x56375cde970a - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 29: 0x56375cde970a - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 30: 0x56375cde970a - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 31: 0x56375cdc2a96 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x56375cdc7a93 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 33: 0x56375cdc7a93 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 34: 0x56375cdc7a93 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 35: 0x56375cdc7a93 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 36: 0x56375cdc7a93 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 37: 0x56375cdc7a93 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 38: 0x56375cdc7a93 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x56375d05eaca - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 40: 0x56375d05eaca - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 41: 0x56375d05eaca - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 42: 0x7f07f1fa9609 - start_thread [INFO] [stdout] 43: 0x7f07f1d7b293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_organisms stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_organisms' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:34 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56375d0552b0 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x56375d0552b0 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x56375d0552b0 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x56375d0552b0 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x56375d07a99c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x56375cdc3716 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x56375d04ee2d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x56375d0579d5 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x56375d0579d5 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x56375d0579d5 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x56375d057622 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x56375d058171 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x56375d057cb7 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x56375d05576c - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x56375d057c19 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x56375d078621 - core::panicking::panic_fmt::ha0bb065d9a260792 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/panicking.rs:92:14 [INFO] [stdout] 16: 0x56375d078443 - core::option::expect_none_failed::h7e1dd0a94971eb61 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/option.rs:1268:5 [INFO] [stdout] 17: 0x56375cdb7529 - core::result::Result::expect::hde3af1c7a1eeb942 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/result.rs:933:23 [INFO] [stdout] 18: 0x56375cd9fd01 - global_supertrees::uniprot::load_mapping_file::h8d2ebae78ca8f77b [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:34:13 [INFO] [stdout] 19: 0x56375cdb5e0d - global_supertrees::tests::tests::test_merge_organisms::hfacda620d3adc480 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:237:26 [INFO] [stdout] 20: 0x56375cdb5dba - global_supertrees::tests::tests::test_merge_organisms::{{closure}}::ha109d0fe57d00655 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:235:5 [INFO] [stdout] 21: 0x56375cd8a59e - core::ops::function::FnOnce::call_once::hd3938c01d0d9a655 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x56375cdeb263 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x56375cdeb263 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 24: 0x56375cde970a - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 25: 0x56375cde970a - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 26: 0x56375cde970a - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 27: 0x56375cde970a - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 28: 0x56375cde970a - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 29: 0x56375cde970a - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 30: 0x56375cde970a - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 31: 0x56375cdc2a96 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x56375cdc7a93 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 33: 0x56375cdc7a93 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 34: 0x56375cdc7a93 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 35: 0x56375cdc7a93 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 36: 0x56375cdc7a93 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 37: 0x56375cdc7a93 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 38: 0x56375cdc7a93 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x56375d05eaca - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 40: 0x56375d05eaca - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 41: 0x56375d05eaca - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 42: 0x7f07f1fa9609 - start_thread [INFO] [stdout] 43: 0x7f07f1d7b293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::tests::test_batch_id_tax_mapping [INFO] [stdout] tests::tests::test_merge_organisms [INFO] [stdout] [INFO] [stdout] test result: FAILED. 14 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin global-supertrees' [INFO] running `Command { std: "docker" "inspect" "cdba24be75f672763be24c4d2fed31a3b3b13aa99841b0b1c44d11e0e773ea53", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cdba24be75f672763be24c4d2fed31a3b3b13aa99841b0b1c44d11e0e773ea53", kill_on_drop: false }` [INFO] [stdout] cdba24be75f672763be24c4d2fed31a3b3b13aa99841b0b1c44d11e0e773ea53