[INFO] fetching crate bio 0.32.0...
[INFO] testing bio-0.32.0 against 1.49.0 for beta-1.50-1
[INFO] extracting crate bio 0.32.0 into /workspace/builds/worker-7/source
[INFO] validating manifest of crates.io crate bio 0.32.0 on toolchain 1.49.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bio 0.32.0
[INFO] finished tweaking crates.io crate bio 0.32.0
[INFO] tweaked toml for crates.io crate bio 0.32.0 written to /workspace/builds/worker-7/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 51aba92120e6081ffb7d2c48fe3b185b85227a3e353c8fb8326efdd003f6a974
[INFO] running `Command { std: "docker" "start" "-a" "51aba92120e6081ffb7d2c48fe3b185b85227a3e353c8fb8326efdd003f6a974", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "51aba92120e6081ffb7d2c48fe3b185b85227a3e353c8fb8326efdd003f6a974", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "51aba92120e6081ffb7d2c48fe3b185b85227a3e353c8fb8326efdd003f6a974", kill_on_drop: false }`
[INFO] [stdout] 51aba92120e6081ffb7d2c48fe3b185b85227a3e353c8fb8326efdd003f6a974
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 297fcf4fe6195bae678654fdbd2b89d575b8335a3a223ceb74519b608b0c0167
[INFO] running `Command { std: "docker" "start" "-a" "297fcf4fe6195bae678654fdbd2b89d575b8335a3a223ceb74519b608b0c0167", kill_on_drop: false }`
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling array-macro v1.0.5
[INFO] [stderr]    Compiling bio v0.32.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling triple_accel v0.3.4
[INFO] [stderr]    Compiling bytecount v0.6.2
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.18.0
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling ordered-float v1.1.1
[INFO] [stderr]    Compiling serde_derive v1.0.118
[INFO] [stderr]    Compiling enum-map-derive v0.4.6
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu-derive v0.6.10
[INFO] [stderr]    Compiling petgraph v0.5.1
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling strum_macros v0.18.0
[INFO] [stderr]    Compiling matrixmultiply v0.2.4
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling enum-map v0.6.4
[INFO] [stderr]    Compiling snafu v0.6.10
[INFO] [stderr]    Compiling serde v1.0.118
[INFO] [stderr]    Compiling bstr v0.2.14
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling multimap v0.8.2
[INFO] [stderr]    Compiling csv v1.1.5
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 51.94s
[INFO] running `Command { std: "docker" "inspect" "297fcf4fe6195bae678654fdbd2b89d575b8335a3a223ceb74519b608b0c0167", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "297fcf4fe6195bae678654fdbd2b89d575b8335a3a223ceb74519b608b0c0167", kill_on_drop: false }`
[INFO] [stdout] 297fcf4fe6195bae678654fdbd2b89d575b8335a3a223ceb74519b608b0c0167
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cddf9192bcd22010cf6c3a271533869cdf6addb2d0f7f456c97c07de148931aa
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "cddf9192bcd22010cf6c3a271533869cdf6addb2d0f7f456c97c07de148931aa", kill_on_drop: false }`
[INFO] [stderr]    Compiling wait-timeout v0.2.0
[INFO] [stderr]    Compiling rand_xorshift v0.2.0
[INFO] [stderr]    Compiling tempfile v3.1.0
[INFO] [stderr]    Compiling rusty-fork v0.3.0
[INFO] [stderr]    Compiling proptest v0.10.1
[INFO] [stderr]    Compiling bio v0.32.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 39.75s
[INFO] running `Command { std: "docker" "inspect" "cddf9192bcd22010cf6c3a271533869cdf6addb2d0f7f456c97c07de148931aa", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cddf9192bcd22010cf6c3a271533869cdf6addb2d0f7f456c97c07de148931aa", kill_on_drop: false }`
[INFO] [stdout] cddf9192bcd22010cf6c3a271533869cdf6addb2d0f7f456c97c07de148931aa
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 57364942f4ccd42b268e845e2fce1d1ac50eb81c6c490a96892b0768106e1604
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "57364942f4ccd42b268e845e2fce1d1ac50eb81c6c490a96892b0768106e1604", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.11s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/bio-3e73ce19b6c30fbc
[INFO] [stdout] 
[INFO] [stdout] running 344 tests
[INFO] [stdout] test alignment::distance::tests::test_levenshtein_dist ... ok
[INFO] [stdout] test alignment::distance::tests::test_hamming_dist_good ... ok
[INFO] [stdout] test alignment::distance::tests::test_simd_bounded_levenshtein_dist ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_band_add_kmer ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_band_add_entry ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_blosum62 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_aligner_new ... ok
[INFO] [stdout] test alignment::distance::tests::test_simd_hamming_dist_good ... ok
[INFO] [stdout] test alignment::distance::tests::test_simd_levenshtein_dist ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_insert_only_semiglobal ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_global_affine_ins ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_insertion_after_clip ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_global_affine_ins2 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_insert_in_between_semiglobal ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_global_right_del ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_issue12_1 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_global ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_deletions_ouside_band ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_left_aligned_ins ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_issue11 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_issue12_3 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_left_aligned_del ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_insertion_ouside_band ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_issue12_2 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_only_clips ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_local_affine_ins2 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_local_empty ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_local ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_insertion ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_longer_string_all_operations ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_band_starts_inside ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_deletion ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_semiglobal ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_band_ends_inside ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_semiglobal_simple ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs3 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_semiglobal_gap_open_lt_mismatch ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_xclip_prefix_custom ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_traceback_outside_band ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_prefix_custom ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_suffix_custom ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs4 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_zero_score_clips ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_xclip_suffix_custom ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_prefix_only ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs1 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs2 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_global_affine_ins ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_blosum62 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_insert_only_semiglobal ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_global ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_suffix_only ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_global_affine_ins2 ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_band_is_fully_inside ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_issue12_2 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_issue12_1 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_left_aligned_ins ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_local ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_insert_in_between_semiglobal ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_issue12_3 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_only_clips ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_left_aligned_del ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_aligner_new ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_issue11 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_scoring_from_scores ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_xclip_prefix_custom ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_semiglobal ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_semiglobal_simple ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_local_affine_ins2 ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_longer_string_all_operations ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_yclip_suffix_custom ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_zero_score_clips ... ok
[INFO] [stdout] test alignment::poa::tests::test_branched_alignment ... ok
[INFO] [stdout] test alignment::distance::tests::test_simd_hamming_dist_bad ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_semiglobal_gap_open_lt_mismatch ... ok
[INFO] [stdout] test alignment::poa::tests::test_alignment ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_global_right_del ... ok
[INFO] [stdout] test alignment::poa::tests::test_insertion_on_branch ... ok
[INFO] [stdout] test alignment::poa::tests::test_init_graph ... ok
[INFO] [stdout] test alignment::distance::tests::test_hamming_dist_bad ... ok
[INFO] [stdout] test alignment::poa::tests::test_alt_branched_alignment ... ok
[INFO] [stdout] test alignment::poa::tests::test_poa_method_chaining ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_expanded_matches ... ok
[INFO] [stdout] test alignment::pairwise::tests::traceback_cell ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_yclip_prefix_custom ... ok
[INFO] [stdout] test alignment::pairwise::tests::test_xclip_suffix_custom ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp2 ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp1 ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_find_kmer_matches ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp0 ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdp ... ok
[INFO] [stdout] test alphabets::dna::tests::is_no_word ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_substitutions ... ok
[INFO] [stdout] test alphabets::dna::tests::symbol_is_no_word ... ok
[INFO] [stdout] test alphabets::protein::tests::number_is_no_word ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp_same ... ok
[INFO] [stdout] test alphabets::protein::tests::symbol_is_no_word ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdp2 ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdpkpp_same ... ok
[INFO] [stdout] test alphabets::rna::tests::number_is_no_word ... ok
[INFO] [stdout] test alphabets::rna::tests::is_no_word ... ok
[INFO] [stdout] test alphabets::rna::tests::symbol_is_no_word ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp_tandem_repeat ... ok
[INFO] [stdout] test alphabets::protein::tests::is_no_word ... ok
[INFO] [stdout] test alphabets::protein::tests::is_word ... ok
[INFO] [stdout] test data_structures::annot_map::tests::lookup ... ok
[INFO] [stdout] test alphabets::dna::tests::is_word ... ok
[INFO] [stdout] test alphabets::dna::tests::number_is_no_word ... ok
[INFO] [stdout] test data_structures::bitenc::tests::test_push_values ... ok
[INFO] [stdout] test data_structures::bwt::tests::test_bwtfind ... ok
[INFO] [stdout] test data_structures::bwt::tests::test_occ ... ok
[INFO] [stdout] test data_structures::annot_map::tests::overlaps ... ok
[INFO] [stdout] test data_structures::bit_tree::test_bit_tree::test_bit_tree ... ok
[INFO] [stdout] test data_structures::bitenc::tests::test_bitenc ... ok
[INFO] [stdout] test data_structures::bitenc::tests::test_push_values_edge_cases ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs5 ... ok
[INFO] [stdout] test data_structures::fmindex::tests::test_smems ... ok
[INFO] [stdout] test data_structures::interval_tree::array_backed_interval_tree::tests::test_example ... ok
[INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::from_iterator ... ok
[INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::iter_mut ... ok
[INFO] [stdout] test data_structures::bwt::tests::test_invert_bwt ... ok
[INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::test_insertion_and_intersection ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdp1 ... ok
[INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::zero_width_ranges ... ok
[INFO] [stdout] test data_structures::fmindex::tests::test_init_interval ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_same ... ok
[INFO] [stdout] test data_structures::qgram_index::tests::test_exact_matches ... ok
[INFO] [stdout] test data_structures::qgram_index::tests::test_matches ... ok
[INFO] [stdout] test data_structures::qgram_index::tests::test_exact_matches_self ... ok
[INFO] [stdout] test data_structures::bitenc::tests::test_issue29 ... ok
[INFO] [stdout] test data_structures::fmindex::tests::test_fmindex_not_found ... ok
[INFO] [stdout] test alphabets::rna::tests::is_word ... ok
[INFO] [stdout] test alphabets::rna::tests::test_reverse_complement ... ok
[INFO] [stdout] test data_structures::fmindex::tests::test_fmindex ... ok
[INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdpkpp_tandem_repeat ... ok
[INFO] [stdout] test data_structures::qgram_index::tests::test_qgram_matches ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_rank_k ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_rank_select2 ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_select ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_rank_select ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_select_start ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_single_select ... ok
[INFO] [stdout] test data_structures::rank_select::tests::test_select_end ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_pos ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_pos_types ... ok
[INFO] [stdout] test io::bed::tests::spliced_to_bed ... ok
[INFO] [stdout] test io::bed::tests::test_writer ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_lms_pos ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_issue10_2 ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_issue10_1 ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_handles_sentinels_properly ... ok
[INFO] [stdout] test io::bed::tests::test_reader ... ok
[INFO] [stdout] test io::fasta::tests::test_display_record_no_desc_id_without_space_after ... ok
[INFO] [stdout] test io::fasta::tests::test_index_record_idx_by_rid_invalid_index_returns_error ... ok
[INFO] [stdout] test io::fasta::tests::test_index_sequences ... ok
[INFO] [stdout] test io::fasta::tests::test_index_record_fetch_by_rid_second_index_returns_second_record ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_bad_reader ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_crlf_by_rid_all ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_crlf_all ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_all ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_buckets ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_by_rid_all ... ok
[INFO] [stdout] test io::fasta::tests::test_display_record_with_desc_id_has_space_between_id_and_desc ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_all ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_crlf_all ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_crlf_by_rid_all ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_read_fails ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_seek_fails ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_by_rid_all ... ok
[INFO] [stdout] test io::fasta::tests::test_faread_trait ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_no_trailing_lf ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_no_fetch_read_iter_fails ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_size_hint ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_crlf ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_reused_buffer ... ok
[INFO] [stdout] test io::fasta::tests::test_reader ... ok
[INFO] [stdout] test io::fasta::tests::test_reader_read_fails ... ok
[INFO] [stdout] test io::fasta::tests::test_reader_read_fails_iter ... ok
[INFO] [stdout] test io::fasta::tests::test_reader_wrong_header ... ok
[INFO] [stdout] test io::fasta::tests::test_record_with_attrs_with_description ... ok
[INFO] [stdout] test io::fasta::tests::test_record_with_attrs_without_description ... ok
[INFO] [stdout] test io::fasta::tests::test_write_record ... FAILED
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_read_seek_fails ... ok
[INFO] [stdout] test io::fasta::tests::test_writer_to_file_dir_exists_returns_ok ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_no_fetch_read_fails ... ok
[INFO] [stdout] test io::fastq::tests::test_check_record_id_is_empty_raises_err ... ok
[INFO] [stdout] test io::fastq::tests::test_check_record_quality_is_not_ascii_raises_err ... ok
[INFO] [stdout] test io::fastq::tests::test_check_record_quality_and_seq_diff_len_raises_err ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_read_read_fails ... ok
[INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_crlf ... ok
[INFO] [stdout] test io::fasta::tests::test_reader_no_id ... ok
[INFO] [stdout] test io::fasta::tests::test_reader_non_ascii_sequence ... ok
[INFO] [stdout] test data_structures::suffix_array::tests::test_sorts_lexically ... ok
[INFO] [stdout] test io::fastq::tests::test_display_record_no_desc_id_without_space_after ... ok
[INFO] [stdout] test io::fastq::tests::test_read_sequence_and_quality_are_wrapped_is_handled_with_one_sequence ... ok
[INFO] [stdout] test io::fastq::tests::test_check_record_seq_is_not_ascii_raises_err ... ok
[INFO] [stdout] test io::fasta::tests::test_writer ... ok
[INFO] [stdout] test io::fastq::tests::test_reader ... ok
[INFO] [stdout] test io::fastq::tests::test_read_sequence_and_quality_are_wrapped_is_handled_with_three_sequences ... ok
[INFO] [stdout] test io::fastq::tests::test_fqread_trait ... ok
[INFO] [stdout] test io::fastq::tests::test_check_valid_record ... ok
[INFO] [stdout] test io::fastq::tests::test_read_header_does_not_start_with_correct_char_raises_err ... ok
[INFO] [stdout] test io::fasta::tests::test_writer_to_file_dir_doesnt_exist_returns_err ... ok
[INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_qual_idx_in_range ... ok
[INFO] [stdout] test io::fastq::tests::test_read_quality_is_empty_raises_err ... ok
[INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_idx_out_of_range ... ok
[INFO] [stdout] test io::fastq::tests::test_read_wrapped_record_with_inconsistent_wrapping_errors ... ok
[INFO] [stdout] test io::fastq::tests::test_reader_from_file_path_doesnt_exist_returns_err ... ok
[INFO] [stdout] test io::fastq::tests::test_record_iterator_next_read_returns_err_causes_next_to_return_some_err ... ok
[INFO] [stdout] test io::fastq::tests::test_reader_from_file_path_exists_returns_ok ... ok
[INFO] [stdout] test io::fastq::tests::test_record_with_attrs ... ok
[INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_idx_in_range ... ok
[INFO] [stdout] test io::fastq::tests::test_display_record_with_desc_id_has_space_between_id_and_desc ... ok
[INFO] [stdout] test io::fastq::tests::test_writer_to_file_dir_doesnt_exist_returns_err ... ok
[INFO] [stdout] test io::fastq::tests::test_writer ... ok
[INFO] [stdout] test io::fastq::tests::test_writer_to_file_dir_exists_returns_ok ... ok
[INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_len ... ok
[INFO] [stdout] test io::gff::tests::test_convert_gtf2_to_gff3 ... ok
[INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_name ... ok
[INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_qual_idx_out_of_range ... ok
[INFO] [stdout] test io::gff::tests::test_reader_gff3 ... ok
[INFO] [stdout] test io::gff::tests::test_reader_gtf2 ... ok
[INFO] [stdout] test pattern_matching::bndm::tests::test_find_all ... ok
[INFO] [stdout] test io::gff::tests::test_writer_gff3 ... ok
[INFO] [stdout] test io::gff::tests::test_reader_gtf2_dup_attr_keys ... ok
[INFO] [stdout] test pattern_matching::bom::tests::test_delta ... ok
[INFO] [stdout] test pattern_matching::kmp::tests::test_lps ... ok
[INFO] [stdout] test pattern_matching::horspool::tests::test_find_all ... ok
[INFO] [stdout] test pattern_matching::bom::tests::test_find_all ... ok
[INFO] [stdout] test io::gff::tests::test_reader_gtf2_2 ... ok
[INFO] [stdout] test pattern_matching::kmp::tests::test_delta ... ok
[INFO] [stdout] test pattern_matching::kmp::tests::test_find_all ... ok
[INFO] [stdout] test pattern_matching::kmp::tests::test_find_all_at_start ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_full_position ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_find_all_end ... ok
[INFO] [stdout] test io::fastq::tests::test_write_record ... FAILED
[INFO] [stdout] test pattern_matching::myers::long::tests::test_alignment ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_ambig ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_distance ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_large_dist ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_long_shorter ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_longest_possible ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_myers_long_overflow ... ok
[INFO] [stdout] test data_structures::fmindex::tests::test_issue39 ... ok
[INFO] [stdout] test io::gff::tests::test_writer_gtf2 ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_shorter ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_traceback_path2 ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_path_at ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_ambig ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_traceback_path ... ok
[INFO] [stdout] test pattern_matching::horspool::tests::test_shift ... ok
[INFO] [stdout] test pattern_matching::myers::long::tests::test_position_cmp ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_longest_possible ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_find_all_end ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_alignment ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_position_cmp ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_full_position ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_large_dist ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_distance ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_traceback_path ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_traceback_path2 ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_path_at ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_long_shorter ... ok
[INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::find_motif ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_shorter ... ok
[INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::test_insertion_and_intersection_2 ... ok
[INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::test_inconsist_err ... ok
[INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_inconsist_err ... ok
[INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_info_content ... ok
[INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::test_info_content ... ok
[INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::test_mono_err ... ok
[INFO] [stdout] test pattern_matching::ukkonen::tests::test_find_start ... ok
[INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_mono_err ... ok
[INFO] [stdout] test scores::pam120::tests::test_pam120 ... ok
[INFO] [stdout] test scores::pam40::tests::test_pam40 ... ok
[INFO] [stdout] test seq_analysis::gc::tests::test_gc_content ... ok
[INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_scoring ... ok
[INFO] [stdout] test seq_analysis::orf::tests::test_one_orf_no_offset ... ok
[INFO] [stdout] test seq_analysis::orf::tests::test_no_orf ... ok
[INFO] [stdout] test seq_analysis::orf::tests::test_one_orf_with_offset ... ok
[INFO] [stdout] test seq_analysis::orf::tests::test_two_orfs_different_offsets ... ok
[INFO] [stdout] test stats::combinatorics::tests::test_comb ... ok
[INFO] [stdout] test stats::hmm::tests::test_discrete_backward_toy_example ... ok
[INFO] [stdout] test pattern_matching::shift_and::tests::test_find_all ... ok
[INFO] [stdout] test stats::hmm::tests::test_discrete_forward_toy_example ... ok
[INFO] [stdout] test scores::pam250::tests::test_pam250 ... ok
[INFO] [stdout] test scores::pam200::tests::test_pam200 ... ok
[INFO] [stdout] test pattern_matching::ukkonen::tests::test_find_all_end ... ok
[INFO] [stdout] test scores::blosum62::tests::test_blosum62 ... ok
[INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::simple_pssm ... ok
[INFO] [stdout] test stats::hmm::tests::test_gaussian_forward_simple_example ... ok
[INFO] [stdout] test stats::hmm::tests::test_gaussian_backward_simple_example ... ok
[INFO] [stdout] test stats::hmm::tests::test_gaussian_forward_equals_backward_simple_example ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_pattern_too_long_builder ... ok
[INFO] [stdout] test stats::bayesian::bayes_factors::tests::test_bayes_factor ... ok
[INFO] [stdout] test stats::combinatorics::tests::test_comb_scaled ... ok
[INFO] [stdout] test stats::bayesian::tests::test_expected_fdr ... ok
[INFO] [stdout] test stats::hmm::tests::test_gaussian_viterbi_simple_example ... ok
[INFO] [stdout] test pattern_matching::myers::tests::test_pattern_too_long ... ok
[INFO] [stdout] test stats::hmm::tests::test_discrete_viterbi_toy_example ... ok
[INFO] [stdout] test data_structures::interpolation_table::tests::test_interpolation_table ... ok
[INFO] [stdout] test alignment::pairwise::banded::banded::test_big ... ok
[INFO] [stdout] test stats::hmm::tests::test_discrete_forward_equals_backward_toy_example ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::impossible_global_alignment ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_banded ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_gap_x ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_gap_y ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_interleave_gaps_x ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_interleave_gaps_y ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_mismatch ... ok
[INFO] [stdout] test stats::pairhmm::pairhmm::tests::test_same ... ok
[INFO] [stdout] test stats::probs::cdf::test::test_cdf ... ok
[INFO] [stdout] test stats::probs::tests::test_cap_numerical_overshoot ... ok
[INFO] [stdout] test stats::probs::tests::test_cap_numerical_overshoot_panic ... ok
[INFO] [stdout] test stats::probs::tests::test_cumsum ... ok
[INFO] [stdout] test stats::probs::tests::test_empty_sum ... ok
[INFO] [stdout] test stats::probs::tests::test_one_minus ... ok
[INFO] [stdout] test stats::probs::tests::test_simpsons_integrate ... ok
[INFO] [stdout] test stats::probs::tests::test_sub ... ok
[INFO] [stdout] test stats::probs::tests::test_sum ... ok
[INFO] [stdout] test stats::probs::tests::test_sum_one_zero ... ok
[INFO] [stdout] test stats::probs::tests::test_trapezoidal_integrate ... ok
[INFO] [stdout] test stats::probs::tests::test_zero ... ok
[INFO] [stdout] test utils::fastexp::tests::test_fastexp ... ok
[INFO] [stdout] test utils::interval::tests::negative_width_range ... ok
[INFO] [stdout] test utils::interval::tests::range_interval_conversions ... ok
[INFO] [stdout] test utils::tests::test_prescan ... ok
[INFO] [stdout] test utils::tests::test_scan ... ok
[INFO] [stdout] test utils::text::tests::test_print_sequence ... ok
[INFO] [stderr] error: test failed, to rerun pass '--lib'
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/deps/bio-3e73ce19b6c30fbc` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "57364942f4ccd42b268e845e2fce1d1ac50eb81c6c490a96892b0768106e1604", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "57364942f4ccd42b268e845e2fce1d1ac50eb81c6c490a96892b0768106e1604", kill_on_drop: false }`
[INFO] [stdout] 57364942f4ccd42b268e845e2fce1d1ac50eb81c6c490a96892b0768106e1604