[INFO] cloning repository https://github.com/sveint/bamstats
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sveint/bamstats" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsveint%2Fbamstats", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsveint%2Fbamstats'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 7e79d502a15c6fabeeeb0ef2974803da91562565
[INFO] testing sveint/bamstats against 1.49.0 for beta-1.50-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsveint%2Fbamstats" "/workspace/builds/worker-12/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/sveint/bamstats on toolchain 1.49.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/sveint/bamstats
[INFO] finished tweaking git repo https://github.com/sveint/bamstats
[INFO] tweaked toml for git repo https://github.com/sveint/bamstats written to /workspace/builds/worker-12/source/Cargo.toml
[INFO] crate git repo https://github.com/sveint/bamstats already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr] error: the lock file /workspace/builds/worker-12/source/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag.
[INFO] the lockfile is outdated, regenerating it
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 2ced55254ef8e1071102dbb5939db473583a44b8fab9861eb67ff356aa574267
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "2ced55254ef8e1071102dbb5939db473583a44b8fab9861eb67ff356aa574267", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2ced55254ef8e1071102dbb5939db473583a44b8fab9861eb67ff356aa574267", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2ced55254ef8e1071102dbb5939db473583a44b8fab9861eb67ff356aa574267", kill_on_drop: false }`
[INFO] [stdout] 2ced55254ef8e1071102dbb5939db473583a44b8fab9861eb67ff356aa574267
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6b673aefacd24e5ada9aacee2e681855e9abdfd716d0821f4aace3f336f8303d
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "6b673aefacd24e5ada9aacee2e681855e9abdfd716d0821f4aace3f336f8303d", kill_on_drop: false }`
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling bio v0.32.0
[INFO] [stderr]    Compiling rust-htslib v0.5.2
[INFO] [stderr]    Compiling array-macro v1.0.5
[INFO] [stderr]    Compiling triple_accel v0.3.4
[INFO] [stderr]    Compiling strum v0.18.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling bytecount v0.6.2
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling heck v0.3.2
[INFO] [stderr]    Compiling itertools v0.10.0
[INFO] [stderr]    Compiling matrixmultiply v0.2.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling regex-automata v0.1.9
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.1.1
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling petgraph v0.5.1
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling enum-map-derive v0.4.6
[INFO] [stderr]    Compiling snafu-derive v0.6.10
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling serde v1.0.118
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling strum_macros v0.20.1
[INFO] [stderr]    Compiling strum_macros v0.18.0
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling enum-map v0.6.4
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stdout] error: could not find native static library `hts`, perhaps an -L flag is missing?
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `rust-htslib`
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "6b673aefacd24e5ada9aacee2e681855e9abdfd716d0821f4aace3f336f8303d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6b673aefacd24e5ada9aacee2e681855e9abdfd716d0821f4aace3f336f8303d", kill_on_drop: false }`
[INFO] [stdout] 6b673aefacd24e5ada9aacee2e681855e9abdfd716d0821f4aace3f336f8303d