[INFO] cloning repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/informationsea/sequencetoolkit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] f3273e476fe4ec0c5e74886ff10f6ca81ccd1266 [INFO] testing informationsea/sequencetoolkit against 1.49.0 for beta-1.50-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit" "/workspace/builds/worker-6/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/informationsea/sequencetoolkit on toolchain 1.49.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/informationsea/sequencetoolkit [INFO] finished tweaking git repo https://github.com/informationsea/sequencetoolkit [INFO] tweaked toml for git repo https://github.com/informationsea/sequencetoolkit written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate git repo https://github.com/informationsea/sequencetoolkit already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.49.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5fcf909bd0a8a6a8b8f52bedf090de31ece6a9be90e5eaf710d02b26f46ee0dd [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5fcf909bd0a8a6a8b8f52bedf090de31ece6a9be90e5eaf710d02b26f46ee0dd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5fcf909bd0a8a6a8b8f52bedf090de31ece6a9be90e5eaf710d02b26f46ee0dd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5fcf909bd0a8a6a8b8f52bedf090de31ece6a9be90e5eaf710d02b26f46ee0dd", kill_on_drop: false }` [INFO] [stdout] 5fcf909bd0a8a6a8b8f52bedf090de31ece6a9be90e5eaf710d02b26f46ee0dd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7b8634b4b0ce6a5cb5852876a28862ca349ab22bc285e0d2922761ae7dbb247e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7b8634b4b0ce6a5cb5852876a28862ca349ab22bc285e0d2922761ae7dbb247e", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling lexical-core v0.7.4 [INFO] [stderr] Compiling static_assertions v1.1.0 [INFO] [stderr] Compiling arrayvec v0.5.1 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling termcolor v1.1.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling bindgen v0.53.3 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling failure_derive v0.1.8 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling rustc-demangle v0.1.16 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling alloc-no-stdlib v2.0.1 [INFO] [stderr] Compiling object v0.20.0 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling snap v1.0.1 [INFO] [stderr] Compiling bio v0.30.1 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling bit-vec v0.6.2 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling strum v0.18.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling miniz_oxide v0.4.2 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling alloc-stdlib v0.2.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling clang-sys v0.29.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling brotli-decompressor v2.3.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling cc v1.0.60 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling flate2 v1.0.17 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling backtrace v0.3.50 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling ordered-float v1.1.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling brotli v3.3.0 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling zstd-sys v1.4.17+zstd.1.4.5 [INFO] [stderr] Compiling lz4-sys v1.9.2 [INFO] [stderr] Compiling lzma-sys v0.1.16 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling statrs v0.12.0 [INFO] [stderr] Compiling pretty_env_logger v0.4.0 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling bzip2 v0.3.3 [INFO] [stderr] Compiling synstructure v0.12.4 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.8 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling lz4 v1.23.2 [INFO] [stderr] Compiling failure v0.1.8 [INFO] [stderr] Compiling snafu v0.6.8 [INFO] [stderr] Compiling vcf v0.4.0 [INFO] [stderr] Compiling bgzip v0.1.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Compiling bio-types v0.6.0 [INFO] [stderr] Compiling bincode v1.3.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling zstd-safe v2.0.5+zstd.1.4.5 [INFO] [stderr] Compiling zstd v0.5.3+zstd.1.4.5 [INFO] [stderr] Compiling autocompress v0.1.0 [INFO] [stderr] Compiling libxlsxwriter-sys v0.9.4 [INFO] [stderr] Compiling xlsxwriter v0.3.1 [INFO] [stderr] Compiling sequencetoolkit v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 5m 01s [INFO] running `Command { std: "docker" "inspect" "7b8634b4b0ce6a5cb5852876a28862ca349ab22bc285e0d2922761ae7dbb247e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7b8634b4b0ce6a5cb5852876a28862ca349ab22bc285e0d2922761ae7dbb247e", kill_on_drop: false }` [INFO] [stdout] 7b8634b4b0ce6a5cb5852876a28862ca349ab22bc285e0d2922761ae7dbb247e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 97678cdc891d1112ca8108976f4fc5f8f53bd05c60dd4454a277179484fb9331 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "97678cdc891d1112ca8108976f4fc5f8f53bd05c60dd4454a277179484fb9331", kill_on_drop: false }` [INFO] [stderr] Compiling sequencetoolkit v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 26.03s [INFO] running `Command { std: "docker" "inspect" "97678cdc891d1112ca8108976f4fc5f8f53bd05c60dd4454a277179484fb9331", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "97678cdc891d1112ca8108976f4fc5f8f53bd05c60dd4454a277179484fb9331", kill_on_drop: false }` [INFO] [stdout] 97678cdc891d1112ca8108976f4fc5f8f53bd05c60dd4454a277179484fb9331 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+1.49.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 808e74801964562dc97d5830493a1350c1c62085ee0da44a5ed8ef50507aafbf [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "808e74801964562dc97d5830493a1350c1c62085ee0da44a5ed8ef50507aafbf", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.34s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/sequencetoolkit-24a16a30cd80c544 [INFO] [stdout] [INFO] [stdout] running 58 tests [INFO] [stdout] test geneannot::annotator::hgvs::position::test::test_write_hgvs_cds_position ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_cds_position_ordering ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_cds_position_forward ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_cds_offset ... ok [INFO] [stdout] test geneannot::annotator::models::refgene::test::test_parse_transcript_line ... ok [INFO] [stdout] test geneannot::annotator::models::fasta::test::test_load_fasta ... ok [INFO] [stdout] test geneannot::annotator::hgvs::position::test::test_parse_hgvs_position ... ok [INFO] [stdout] test bedutils::parser::test::test_bed_parser ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_exon_position_forward ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_exon_position_reverse ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_genome_position_from_cds_reverse ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_genome_position_from_cds_forward ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_transcript_position_ordering ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_transcript_position_reverse ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_transcript_position_forward ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_transcript_genome_position_forward ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_cds_position_reverse ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_len ... ok [INFO] [stdout] test geneannot::annotator::models::test::test_genome_position_reverse ... ok [INFO] [stdout] test geneannot::annotator::models::refgene::test::test_parse_coding_transcript ... ok [INFO] [stdout] test vcfutils::logic::generate_sql::test::test_clean_name ... ok [INFO] [stdout] test vcfutils::logic::add_af::test::test_load_category_mapping ... ok [INFO] [stdout] test vcfutils::logic::add_contig::test::test_add_contig ... ok [INFO] [stdout] test geneannot::annotator::models::refgene::test::test_parse_noncoding_transcript ... ok [INFO] [stdout] test geneannot::annotator::models::refgene::test::test_parse_coding_transcript2 ... ok [INFO] [stdout] test vcfutils::logic::generate_sql::test::test_generate_sql ... ok [INFO] [stdout] test vcfutils::logic::rewrite_format::test::test_rewrite_format ... ok [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_vcf2table_csv_no_split ... ok [INFO] [stdout] test vcfutils::logic::replace_sample::test::test_replace_sample ... ok [INFO] [stdout] test vcfutils::commands::replace_sample::test::test_create_mapping ... ok [INFO] [stdout] test vcfutils::logic::rewrite_info::test::test_rewrite_info ... ok [INFO] [stderr] [ERROR] workbook_close(): Error creating 'target/table-no-split.xlsx'. System error = No such file or directory [INFO] [stdout] test vcfutils::logic::replace_sample::test::test_replace_sample2 ... ok [INFO] [stderr] [ERROR] workbook_close(): Error creating 'target/table-split-multi.xlsx'. System error = No such file or directory [INFO] [stdout] test vcfutils::commands::extract_canonical::test::test_extract_canonical ... ok [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_write_comma_separated_values ... ok [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_write_value_for_alt_index ... ok [INFO] [stdout] test vcfutils::utils::recalc_af::test::test_allele_count ... ok [INFO] [stdout] test vcfutils::utils::recalc_af::test::test_allele_count2 ... ok [INFO] [stdout] test vcfutils::utils::recalc_af::test::test_combination ... ok [INFO] [stdout] test vcfutils::utils::recalc_af::test::test_from_record ... ok [INFO] [stdout] test vcfutils::utils::recalc_af::test::test_genotype_index ... ok [INFO] [stdout] test vcfutils::utils::recalc_af::test::test_number_of_genotype ... ok [INFO] [stdout] test vcfutils::utils::tablewriter::test::test_csv_writer ... ok [INFO] [stdout] test vcfutils::utils::tablewriter::test::test_table_writer ... ok [INFO] [stdout] test vcfutils::utils::test::test_load_mapping ... ok [INFO] [stdout] test vcfutils::utils::test::test_open_vcf_from_path ... ok [INFO] [stdout] test vcfutils::commands::vcf2csv::test::test_create_config ... ok [INFO] [stdout] test vcfutils::logic::add_contig::test::test_scan_contig ... ok [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi ... FAILED [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi ... FAILED [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical ... FAILED [INFO] [stdout] test bedutils::commands::expand_bed::test::test_expand2 ... FAILED [INFO] [stdout] test vcfutils::logic::add_af::test::test_add_af ... FAILED [INFO] [stdout] test bedutils::commands::expand_bed::test::test_expand ... FAILED [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff ... FAILED [INFO] [stdout] test vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi ... FAILED [INFO] [stdout] test vcfutils::logic::replace_contig::test::test_replace_contig ... FAILED [INFO] [stdout] test geneannot::annotator::models::refgene::test::test_load_refgene ... ok [INFO] [stdout] test geneannot::annotator::models::refgene::test::test_load_gencode ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: XlsxError { error: 2 } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:114 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:907 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi::{{closure}} [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:884 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Xlsx handling Error } [INFO] [stdout] thread 'vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a60ebf9 - sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi::{{closure}}::h861b18542060cc0b [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/vcf2table.rs:884:5 [INFO] [stdout] 18: 0x55b99a6480fe - core::ops::function::FnOnce::call_once::hdfb834d13b9ab81f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:78 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:765 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi::{{closure}} [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:741 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a60b509 - sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi::{{closure}}::h26ed30ab838de7bf [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/vcf2table.rs:741:5 [INFO] [stdout] 18: 0x55b99a64753e - core::ops::function::FnOnce::call_once::h043d9e26ec37f81a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:78 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:843 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical::{{closure}} [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:813 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a60d2e9 - sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical::{{closure}}::h47688c992324c2d4 [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/vcf2table.rs:813:5 [INFO] [stdout] 18: 0x55b99a6477fe - core::ops::function::FnOnce::call_once::h29ce93244c96f6d7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- bedutils::commands::expand_bed::test::test_expand2 stdout ---- [INFO] [stdout] Error: SequenceToolkitError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/error.rs:87 [INFO] [stdout] 8: ::run [INFO] [stdout] at src/bedutils/commands/expand_bed.rs:79 [INFO] [stdout] 9: sequencetoolkit::bedutils::commands::expand_bed::test::test_expand2 [INFO] [stdout] at src/bedutils/commands/expand_bed.rs:154 [INFO] [stdout] 10: sequencetoolkit::bedutils::commands::expand_bed::test::test_expand2::{{closure}} [INFO] [stdout] at src/bedutils/commands/expand_bed.rs:141 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 12: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 13: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 14: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 15: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 16: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 17: start_thread [INFO] [stdout] 18: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'bedutils::commands::expand_bed::test::test_expand2' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a53fd33 - test::assert_test_result::h05b8c0ba1cda3c98 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a637ff9 - sequencetoolkit::bedutils::commands::expand_bed::test::test_expand2::{{closure}}::h153810faafb92de0 [INFO] [stdout] at /opt/rustwide/workdir/src/bedutils/commands/expand_bed.rs:141:5 [INFO] [stdout] 18: 0x55b99a6478ee - core::ops::function::FnOnce::call_once::h3e1f4d80799f4b6e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::add_af::test::test_add_af stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:78 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::add_af::test::test_add_af [INFO] [stdout] at src/vcfutils/logic/add_af.rs:226 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::add_af::test::test_add_af::{{closure}} [INFO] [stdout] at src/vcfutils/logic/add_af.rs:211 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'vcfutils::logic::add_af::test::test_add_af' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a50e6f9 - sequencetoolkit::vcfutils::logic::add_af::test::test_add_af::{{closure}}::h20348855d37845ba [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/add_af.rs:211:5 [INFO] [stdout] 18: 0x55b99a647dbe - core::ops::function::FnOnce::call_once::ha6d524f9f9e7aab0 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- bedutils::commands::expand_bed::test::test_expand stdout ---- [INFO] [stdout] Error: SequenceToolkitError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/error.rs:87 [INFO] [stdout] 8: ::run [INFO] [stdout] at src/bedutils/commands/expand_bed.rs:79 [INFO] [stdout] 9: sequencetoolkit::bedutils::commands::expand_bed::test::test_expand [INFO] [stdout] at src/bedutils/commands/expand_bed.rs:119 [INFO] [stdout] 10: sequencetoolkit::bedutils::commands::expand_bed::test::test_expand::{{closure}} [INFO] [stdout] at src/bedutils/commands/expand_bed.rs:108 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 12: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 13: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 14: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 15: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 16: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 17: start_thread [INFO] [stdout] 18: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'bedutils::commands::expand_bed::test::test_expand' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a53fd33 - test::assert_test_result::h05b8c0ba1cda3c98 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a637619 - sequencetoolkit::bedutils::commands::expand_bed::test::test_expand::{{closure}}::h82ed7fb253530edb [INFO] [stdout] at /opt/rustwide/workdir/src/bedutils/commands/expand_bed.rs:108:5 [INFO] [stdout] 18: 0x55b99a647cce - core::ops::function::FnOnce::call_once::h959db535b00ae6f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:78 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:802 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff::{{closure}} [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:776 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a60c399 - sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff::{{closure}}::hac23147a42d19e69 [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/vcf2table.rs:776:5 [INFO] [stdout] 18: 0x55b99a647d5e - core::ops::function::FnOnce::call_once::h9dce7806effc9924 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: XlsxError { error: 2 } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:114 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:935 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi::{{closure}} [INFO] [stdout] at src/vcfutils/logic/vcf2table.rs:912 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] Xlsx handling Error } [INFO] [stdout] thread 'vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a60f9e9 - sequencetoolkit::vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi::{{closure}}::hbfe0e4212ab5441e [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/vcf2table.rs:912:5 [INFO] [stdout] 18: 0x55b99a647d8e - core::ops::function::FnOnce::call_once::ha66b062c02c9bfbd [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- vcfutils::logic::replace_contig::test::test_replace_contig stdout ---- [INFO] [stdout] Error: VCFUtilsError { inner: Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] [INFO] [stdout] 0: failure::backtrace::internal::InternalBacktrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/internal.rs:46 [INFO] [stdout] 1: failure::backtrace::Backtrace::new [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/backtrace/mod.rs:121 [INFO] [stdout] 2: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/error_impl.rs:19 [INFO] [stdout] 3: >::from [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/error/mod.rs:36 [INFO] [stdout] 4: >::into [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/convert/mod.rs:546 [INFO] [stdout] 5: failure::context::Context::with_err [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/context.rs:105 [INFO] [stdout] 6: failure::Fail::context [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/failure-0.1.8/src/lib.rs:160 [INFO] [stdout] 7: >::from [INFO] [stdout] at src/vcfutils/error.rs:78 [INFO] [stdout] 8: sequencetoolkit::vcfutils::logic::replace_contig::test::test_replace_contig [INFO] [stdout] at src/vcfutils/logic/replace_contig.rs:62 [INFO] [stdout] 9: sequencetoolkit::vcfutils::logic::replace_contig::test::test_replace_contig::{{closure}} [INFO] [stdout] at src/vcfutils/logic/replace_contig.rs:53 [INFO] [stdout] 10: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 11: core::ops::function::FnOnce::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] test::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517 [INFO] [stdout] 12: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] test::run_test_in_process [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544 [INFO] [stdout] test::run_test::run_test_inner::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450 [INFO] [stdout] 13: std::sys_common::backtrace::__rust_begin_short_backtrace [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125 [INFO] [stdout] 14: std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474 [INFO] [stdout] as core::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322 [INFO] [stdout] std::panicking::try::do_call [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381 [INFO] [stdout] std::panicking::try [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345 [INFO] [stdout] std::panic::catch_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396 [INFO] [stdout] std::thread::Builder::spawn_unchecked::{{closure}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473 [INFO] [stdout] core::ops::function::FnOnce::call_once{{vtable.shim}} [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227 [INFO] [stdout] 15: as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] as core::ops::function::FnOnce>::call_once [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307 [INFO] [stdout] std::sys::unix::thread::Thread::new::thread_start [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71 [INFO] [stdout] 16: start_thread [INFO] [stdout] 17: clone [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] I/O Error } [INFO] [stdout] thread 'vcfutils::logic::replace_contig::test::test_replace_contig' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `1`, [INFO] [stdout] right: `0`: the test returned a termination value with a non-zero status code (1) which indicates a failure', /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55b99ac4e040 - std::backtrace_rs::backtrace::libunwind::trace::h04d12fdcddff82aa [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stdout] 1: 0x55b99ac4e040 - std::backtrace_rs::backtrace::trace_unsynchronized::h1459b974b6fbe5e1 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55b99ac4e040 - std::sys_common::backtrace::_print_fmt::h9b8396a669123d95 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55b99ac4e040 - ::fmt::he009dcaaa75eed60 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55b99ac7361c - core::fmt::write::h77b4746b0dea1dd3 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55b99a8e53b6 - std::io::Write::write_fmt::h3a40d9c04f88bb58 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/mod.rs:1518:15 [INFO] [stdout] 6: 0x55b99ac4649d - std::io::impls::>::write_fmt::h1b3d263673641f53 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/io/impls.rs:179:9 [INFO] [stdout] 7: 0x55b99ac50735 - std::sys_common::backtrace::_print::h2d880c9e69a21be9 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 8: 0x55b99ac50735 - std::sys_common::backtrace::print::h5f02b1bb49f36879 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 9: 0x55b99ac50735 - std::panicking::default_hook::{{closure}}::h658e288a7a809b29 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:208:50 [INFO] [stdout] 10: 0x55b99ac50382 - std::panicking::default_hook::hb52d73f0da9a4bb8 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:224:9 [INFO] [stdout] 11: 0x55b99ac50ed1 - std::panicking::rust_panic_with_hook::hfe7e1c684e3e6462 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:593:17 [INFO] [stdout] 12: 0x55b99ac50a17 - std::panicking::begin_panic_handler::{{closure}}::h42939e004b32765c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:499:13 [INFO] [stdout] 13: 0x55b99ac4e4fc - std::sys_common::backtrace::__rust_end_short_backtrace::h9d2070f7bf9fd56c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 14: 0x55b99ac50979 - rust_begin_unwind [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:495:5 [INFO] [stdout] 15: 0x55b99ac5092b - std::panicking::begin_panic_fmt::h4a7e15187eac098d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:437:5 [INFO] [stdout] 16: 0x55b99a540273 - test::assert_test_result::h89e39d40e48da47d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:193:5 [INFO] [stdout] 17: 0x55b99a696539 - sequencetoolkit::vcfutils::logic::replace_contig::test::test_replace_contig::{{closure}}::haf6c96736bc4b69b [INFO] [stdout] at /opt/rustwide/workdir/src/vcfutils/logic/replace_contig.rs:53:5 [INFO] [stdout] 18: 0x55b99a64806e - core::ops::function::FnOnce::call_once::hd7ca80342eb67684 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55b99a90cf03 - core::ops::function::FnOnce::call_once::hdbd2235b6243db3d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55b99a90cf03 - test::__rust_begin_short_backtrace::hb1dea1c208110812 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:517:5 [INFO] [stdout] 21: 0x55b99a90b3aa - as core::ops::function::FnOnce>::call_once::h5d11a40efef721f2 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 22: 0x55b99a90b3aa - as core::ops::function::FnOnce<()>>::call_once::h23961df98af0bc5a [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 23: 0x55b99a90b3aa - std::panicking::try::do_call::h6390646e3de3fb9e [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 24: 0x55b99a90b3aa - std::panicking::try::hc531439ab6159192 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 25: 0x55b99a90b3aa - std::panic::catch_unwind::h859d8bdaf9b4855c [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 26: 0x55b99a90b3aa - test::run_test_in_process::hae60aa74417e3abc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:544:18 [INFO] [stdout] 27: 0x55b99a90b3aa - test::run_test::run_test_inner::{{closure}}::hf48c86652c4a151d [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/test/src/lib.rs:450:39 [INFO] [stdout] 28: 0x55b99a8e4736 - std::sys_common::backtrace::__rust_begin_short_backtrace::hb82b392232b8bd1f [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 29: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h79ca9e9abe157956 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 30: 0x55b99a8e9733 - as core::ops::function::FnOnce<()>>::call_once::ha12f1f228780a4f7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:322:9 [INFO] [stdout] 31: 0x55b99a8e9733 - std::panicking::try::do_call::h722bb7416d021cdc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:381:40 [INFO] [stdout] 32: 0x55b99a8e9733 - std::panicking::try::h78e5abca71ac7cac [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panicking.rs:345:19 [INFO] [stdout] 33: 0x55b99a8e9733 - std::panic::catch_unwind::h95162588bd0fa090 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/panic.rs:396:14 [INFO] [stdout] 34: 0x55b99a8e9733 - std::thread::Builder::spawn_unchecked::{{closure}}::h64da5c4b9acc58dc [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 35: 0x55b99a8e9733 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h7a8c588ad0b69edb [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 36: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::h09ff301006f1aeca [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 37: 0x55b99ac5772a - as core::ops::function::FnOnce>::call_once::he79488c8f00b5f31 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/alloc/src/boxed.rs:1307:9 [INFO] [stdout] 38: 0x55b99ac5772a - std::sys::unix::thread::Thread::new::thread_start::h587efff279c68ba7 [INFO] [stdout] at /rustc/e1884a8e3c3e813aada8254edfa120e85bf5ffca/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 39: 0x7f2eecafb609 - start_thread [INFO] [stdout] 40: 0x7f2eec8d1293 - clone [INFO] [stdout] 41: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] bedutils::commands::expand_bed::test::test_expand [INFO] [stdout] bedutils::commands::expand_bed::test::test_expand2 [INFO] [stdout] vcfutils::logic::add_af::test::test_add_af [INFO] [stdout] vcfutils::logic::replace_contig::test::test_replace_contig [INFO] [stdout] vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi [INFO] [stdout] vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff [INFO] [stdout] vcfutils::logic::vcf2table::test::test_vcf2table_csv_split_multi_snpeff_with_canonical [INFO] [stdout] vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_no_split_multi [INFO] [stdout] vcfutils::logic::vcf2table::test::test_vcf2table_xlsx_split_multi [INFO] [stdout] [INFO] [stdout] test result: FAILED. 49 passed; 9 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin sequencetoolkit' [INFO] running `Command { std: "docker" "inspect" "808e74801964562dc97d5830493a1350c1c62085ee0da44a5ed8ef50507aafbf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "808e74801964562dc97d5830493a1350c1c62085ee0da44a5ed8ef50507aafbf", kill_on_drop: false }` [INFO] [stdout] 808e74801964562dc97d5830493a1350c1c62085ee0da44a5ed8ef50507aafbf