[INFO] fetching crate hdf5-rs 0.2.0...
[INFO] documenting hdf5-rs-0.2.0 against 1.47.0 for beta-1.48-rustdoc-1
[INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-1/source
[INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 1.47.0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.47.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0
[INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0
[INFO] finished tweaking crates.io crate hdf5-rs 0.2.0
[INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.47.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.47.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.47.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e6008e73039279e3091a967f33e75a1ab27de6a9e8bdba25c52791b55cd0880a
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "e6008e73039279e3091a967f33e75a1ab27de6a9e8bdba25c52791b55cd0880a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e6008e73039279e3091a967f33e75a1ab27de6a9e8bdba25c52791b55cd0880a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e6008e73039279e3091a967f33e75a1ab27de6a9e8bdba25c52791b55cd0880a", kill_on_drop: false }`
[INFO] [stdout] e6008e73039279e3091a967f33e75a1ab27de6a9e8bdba25c52791b55cd0880a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.47.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fd369fc68b12b2848e9163830c433fd868cb71d615a085bc1d5aa8742cf647cd
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "fd369fc68b12b2848e9163830c433fd868cb71d615a085bc1d5aa8742cf647cd", kill_on_drop: false }`
[INFO] [stderr]     Checking lazy_static v0.1.16
[INFO] [stderr]    Compiling libhdf5-lib v0.2.0
[INFO] [stderr]     Checking remutex v0.1.1
[INFO] [stderr]    Compiling libhdf5-sys v0.2.0
[INFO] [stderr]    Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir)
[INFO] [stdout] error: linking with `cc` failed: exit code: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.build_script_build.287jl283-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.build_script_build.287jl283-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.build_script_build.287jl283-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.build_script_build.287jl283-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.build_script_build.287jl283-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.build_script_build.287jl283-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc" "/opt/rustwide/target/debug/build/hdf5-rs-39f7cf49cd099cfc/build_script_build-39f7cf49cd099cfc.3k5r23a1zft7r0zb.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-1023d79c8b372f6d.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-f14aca24435a5414.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-48d342a8b48d1d01.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-14bc0820888c8eb3.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-9cbd9e217bff06bc.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-31826136df98934e.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-075976a117c8fd5d.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-2d5cbedfbf17a011.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-0474372ff08c5319.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-d437c34460d2315a.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-fb61ed1b8cc4de79.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-bf76d1b643bfc9f0.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-a1b53aa7fddcf418.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-28585e57fac45c73.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-64801769bc15ab28.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-541997b56bb98660.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cdea3c81adab3d12.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-cd9f15a39fb65cbc.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil"
[INFO] [stdout]   = note: /usr/bin/ld: cannot find -lhdf5
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `hdf5-rs`.
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] error: linking with `cc` failed: exit code: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.build_script_build.2sd1cufx-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.build_script_build.2sd1cufx-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.build_script_build.2sd1cufx-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.build_script_build.2sd1cufx-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.build_script_build.2sd1cufx-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.build_script_build.2sd1cufx-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914" "/opt/rustwide/target/debug/build/libhdf5-sys-44b6a5863feff914/build_script_build-44b6a5863feff914.39uiszwu4q4mgec5.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-1023d79c8b372f6d.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-f14aca24435a5414.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-48d342a8b48d1d01.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-14bc0820888c8eb3.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-9cbd9e217bff06bc.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-31826136df98934e.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-075976a117c8fd5d.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-2d5cbedfbf17a011.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-0474372ff08c5319.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-d437c34460d2315a.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-fb61ed1b8cc4de79.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-bf76d1b643bfc9f0.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-a1b53aa7fddcf418.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-28585e57fac45c73.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-64801769bc15ab28.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-541997b56bb98660.rlib" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cdea3c81adab3d12.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/1.47.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-cd9f15a39fb65cbc.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil"
[INFO] [stdout]   = note: /usr/bin/ld: cannot find -lhdf5
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: build failed
[INFO] [stdout] error: aborting due to previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "fd369fc68b12b2848e9163830c433fd868cb71d615a085bc1d5aa8742cf647cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fd369fc68b12b2848e9163830c433fd868cb71d615a085bc1d5aa8742cf647cd", kill_on_drop: false }`
[INFO] [stdout] fd369fc68b12b2848e9163830c433fd868cb71d615a085bc1d5aa8742cf647cd
