[INFO] fetching crate phyloalifold 0.1.3...
[INFO] testing phyloalifold-0.1.3 against beta-2020-10-09 for beta-1.48-1
[INFO] extracting crate phyloalifold 0.1.3 into /workspace/builds/worker-2/source
[INFO] validating manifest of crates.io crate phyloalifold 0.1.3 on toolchain beta-2020-10-09
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate phyloalifold 0.1.3
[INFO] finished tweaking crates.io crate phyloalifold 0.1.3
[INFO] tweaked toml for crates.io crate phyloalifold 0.1.3 written to /workspace/builds/worker-2/source/Cargo.toml
[INFO] crate crates.io crate phyloalifold 0.1.3 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded phylofold v0.1.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] db26989e11f0d2704315e4fd5c15b4e7e9a1597edd6edbff1674990c735a1708
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "db26989e11f0d2704315e4fd5c15b4e7e9a1597edd6edbff1674990c735a1708", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "db26989e11f0d2704315e4fd5c15b4e7e9a1597edd6edbff1674990c735a1708", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "db26989e11f0d2704315e4fd5c15b4e7e9a1597edd6edbff1674990c735a1708", kill_on_drop: false }`
[INFO] [stdout] db26989e11f0d2704315e4fd5c15b4e7e9a1597edd6edbff1674990c735a1708
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 6be9a3bd353e48b1bb75e4defd47454a3ad1a92a07e896551187409041fb8ee4
[INFO] running `Command { std: "docker" "start" "-a" "6be9a3bd353e48b1bb75e4defd47454a3ad1a92a07e896551187409041fb8ee4", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.9
[INFO] [stderr]    Compiling syn v1.0.16
[INFO] [stderr]    Compiling serde v1.0.104
[INFO] [stderr]    Compiling libc v0.2.67
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling ryu v1.0.2
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling ucd-util v0.1.7
[INFO] [stderr]    Compiling rawpointer v0.1.0
[INFO] [stderr]    Compiling bv v0.7.4
[INFO] [stderr]    Compiling ndarray v0.9.1
[INFO] [stderr]    Compiling bit-vec v0.4.4
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazy_static v0.1.16
[INFO] [stderr]    Compiling lazy_static v0.2.11
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bytecount v0.3.2
[INFO] [stderr]    Compiling approx v0.1.1
[INFO] [stderr]    Compiling num-integer v0.1.42
[INFO] [stderr]    Compiling unreachable v1.0.0
[INFO] [stderr]    Compiling itertools v0.6.5
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling getopts v0.2.21
[INFO] [stderr]    Compiling regex-syntax v0.5.6
[INFO] [stderr]    Compiling bit-set v0.4.0
[INFO] [stderr]    Compiling aho-corasick v0.6.10
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling regex-automata v0.1.9
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling num-traits v0.1.43
[INFO] [stderr]    Compiling num-complex v0.1.43
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v0.5.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]    Compiling time v0.1.42
[INFO] [stderr]    Compiling num_cpus v1.12.0
[INFO] [stderr]    Compiling bio-seq-algos v0.1.15
[INFO] [stderr]    Compiling rna-ss-params v0.1.16
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling serde_derive v1.0.104
[INFO] [stderr]    Compiling bstr v0.2.11
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling multimap v0.4.0
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling bio v0.20.3
[INFO] [stderr]    Compiling rna-algos v0.1.14
[INFO] [stderr]    Compiling phyloprob v0.1.2
[INFO] [stderr]    Compiling phylofold v0.1.2
[INFO] [stderr]    Compiling phyloalifold v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 39s
[INFO] running `Command { std: "docker" "inspect" "6be9a3bd353e48b1bb75e4defd47454a3ad1a92a07e896551187409041fb8ee4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6be9a3bd353e48b1bb75e4defd47454a3ad1a92a07e896551187409041fb8ee4", kill_on_drop: false }`
[INFO] [stdout] 6be9a3bd353e48b1bb75e4defd47454a3ad1a92a07e896551187409041fb8ee4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a4d7c962f44c0a25c605f3c0423bbfac207a862407d779b2d5fa6ac9c26778ff
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "a4d7c962f44c0a25c605f3c0423bbfac207a862407d779b2d5fa6ac9c26778ff", kill_on_drop: false }`
[INFO] [stderr]    Compiling phyloalifold v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.59s
[INFO] running `Command { std: "docker" "inspect" "a4d7c962f44c0a25c605f3c0423bbfac207a862407d779b2d5fa6ac9c26778ff", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a4d7c962f44c0a25c605f3c0423bbfac207a862407d779b2d5fa6ac9c26778ff", kill_on_drop: false }`
[INFO] [stdout] a4d7c962f44c0a25c605f3c0423bbfac207a862407d779b2d5fa6ac9c26778ff
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 3d742c4b4ce185d41e2ebcf85c53cfa3bafd93c527070e5461ff17c24404007d
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "3d742c4b4ce185d41e2ebcf85c53cfa3bafd93c527070e5461ff17c24404007d", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.10s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/phyloalifold-16332db8e729b3dd
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/phyloalifold-c97340fde220db03
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests phyloalifold
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "3d742c4b4ce185d41e2ebcf85c53cfa3bafd93c527070e5461ff17c24404007d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3d742c4b4ce185d41e2ebcf85c53cfa3bafd93c527070e5461ff17c24404007d", kill_on_drop: false }`
[INFO] [stdout] 3d742c4b4ce185d41e2ebcf85c53cfa3bafd93c527070e5461ff17c24404007d
