[INFO] fetching crate gfautil 0.2.0...
[INFO] testing gfautil-0.2.0 against beta-2020-10-09 for beta-1.48-1
[INFO] extracting crate gfautil 0.2.0 into /workspace/builds/worker-5/source
[INFO] validating manifest of crates.io crate gfautil 0.2.0 on toolchain beta-2020-10-09
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate gfautil 0.2.0
[INFO] finished tweaking crates.io crate gfautil 0.2.0
[INFO] tweaked toml for crates.io crate gfautil 0.2.0 written to /workspace/builds/worker-5/source/Cargo.toml
[INFO] crate crates.io crate gfautil 0.2.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded three-edge-connected v0.1.0
[INFO] [stderr]   Downloaded handlegraph v0.5.0
[INFO] [stderr]   Downloaded saboten v0.0.1
[INFO] [stderr]   Downloaded gfa v0.8.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] dd454dd31071319abdae004e2f9772e79d92ae7a292861c74037b6b7584ac7f6
[INFO] running `Command { std: "docker" "start" "-a" "dd454dd31071319abdae004e2f9772e79d92ae7a292861c74037b6b7584ac7f6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "dd454dd31071319abdae004e2f9772e79d92ae7a292861c74037b6b7584ac7f6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dd454dd31071319abdae004e2f9772e79d92ae7a292861c74037b6b7584ac7f6", kill_on_drop: false }`
[INFO] [stdout] dd454dd31071319abdae004e2f9772e79d92ae7a292861c74037b6b7584ac7f6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3ebe192f2f6d069f0543b7aa9d22e160ea477febcbcd98a6bbdc6ab281b4b1c6
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "3ebe192f2f6d069f0543b7aa9d22e160ea477febcbcd98a6bbdc6ab281b4b1c6", kill_on_drop: false }`
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling bio v0.32.0
[INFO] [stderr]    Compiling triple_accel v0.3.4
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling num-traits v0.2.12
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.3
[INFO] [stderr]    Compiling num-integer v0.1.43
[INFO] [stderr]    Compiling indexmap v1.6.0
[INFO] [stderr]    Compiling proc-macro-error v1.0.3
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling rayon v1.4.1
[INFO] [stderr]    Compiling aho-corasick v0.7.12
[INFO] [stderr]    Compiling getrandom v0.1.15
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling time v0.1.44
[INFO] [stderr]    Compiling crossbeam-channel v0.4.4
[INFO] [stderr]    Compiling matrixmultiply v0.2.3
[INFO] [stderr]    Compiling syn-mid v0.5.0
[INFO] [stderr]    Compiling bytemuck_derive v1.0.0
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu-derive v0.6.9
[INFO] [stderr]    Compiling strum_macros v0.18.0
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling enum-map v0.6.3
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bstr v0.2.13
[INFO] [stderr]    Compiling serde_json v1.0.57
[INFO] [stderr]    Compiling multimap v0.8.2
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling rayon-core v1.8.1
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling clap v2.33.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling petgraph v0.5.1
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.1.0
[INFO] [stderr]    Compiling bytemuck v1.4.1
[INFO] [stderr]    Compiling chrono v0.4.19
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling gfa v0.8.0
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stderr]    Compiling structopt-derive v0.4.8
[INFO] [stderr]    Compiling snafu v0.6.9
[INFO] [stderr]    Compiling structopt v0.3.15
[INFO] [stderr]    Compiling three-edge-connected v0.1.0
[INFO] [stderr]    Compiling saboten v0.0.1
[INFO] [stderr]    Compiling handlegraph v0.5.0
[INFO] [stderr]    Compiling gfautil v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 05s
[INFO] running `Command { std: "docker" "inspect" "3ebe192f2f6d069f0543b7aa9d22e160ea477febcbcd98a6bbdc6ab281b4b1c6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3ebe192f2f6d069f0543b7aa9d22e160ea477febcbcd98a6bbdc6ab281b4b1c6", kill_on_drop: false }`
[INFO] [stdout] 3ebe192f2f6d069f0543b7aa9d22e160ea477febcbcd98a6bbdc6ab281b4b1c6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ea19002f6dacc23539cb51b96c462296e1d0211cfa88b0e0ca860fd06ff53654
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "ea19002f6dacc23539cb51b96c462296e1d0211cfa88b0e0ca860fd06ff53654", kill_on_drop: false }`
[INFO] [stderr]    Compiling gfautil v0.2.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: type alias is never used: `GAF`
[INFO] [stdout]   --> tests/gaf_convert.rs:14:1
[INFO] [stdout]    |
[INFO] [stdout] 14 | type GAF = gfa::gafpaf::GAF<OptionalFields>;
[INFO] [stdout]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 6.15s
[INFO] running `Command { std: "docker" "inspect" "ea19002f6dacc23539cb51b96c462296e1d0211cfa88b0e0ca860fd06ff53654", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ea19002f6dacc23539cb51b96c462296e1d0211cfa88b0e0ca860fd06ff53654", kill_on_drop: false }`
[INFO] [stdout] ea19002f6dacc23539cb51b96c462296e1d0211cfa88b0e0ca860fd06ff53654
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 84db196e29f431be2a717d8bd3d810d6f5bd2b1735540cd3058364f81dc3e101
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "84db196e29f431be2a717d8bd3d810d6f5bd2b1735540cd3058364f81dc3e101", kill_on_drop: false }`
[INFO] [stderr] warning: type alias is never used: `GAF`
[INFO] [stderr]   --> tests/gaf_convert.rs:14:1
[INFO] [stderr]    |
[INFO] [stderr] 14 | type GAF = gfa::gafpaf::GAF<OptionalFields>;
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 1 warning emitted
[INFO] [stderr] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.22s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/gfautil-fffddc61ba5cd5be
[INFO] [stdout] running 0 tests
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/gfautil-884379c483ff2065
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test tests::converted_gfa_path_correct ... ok
[INFO] [stdout] test tests::name_map_path_correct ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/gaf_convert-4610d8aeb837df5e
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stderr]    Doc-tests gfautil
[INFO] [stdout] test gafpaf_no_overlaps ... ok
[INFO] [stdout] test gafpaf_dels ... ok
[INFO] [stdout] test gafpaf_overlaps ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "84db196e29f431be2a717d8bd3d810d6f5bd2b1735540cd3058364f81dc3e101", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "84db196e29f431be2a717d8bd3d810d6f5bd2b1735540cd3058364f81dc3e101", kill_on_drop: false }`
[INFO] [stdout] 84db196e29f431be2a717d8bd3d810d6f5bd2b1735540cd3058364f81dc3e101
