[INFO] fetching crate libprosic 0.7.3...
[INFO] testing libprosic-0.7.3 against beta-2020-10-09 for beta-1.48-1
[INFO] extracting crate libprosic 0.7.3 into /workspace/builds/worker-9/source
[INFO] validating manifest of crates.io crate libprosic 0.7.3 on toolchain beta-2020-10-09
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate libprosic 0.7.3
[INFO] finished tweaking crates.io crate libprosic 0.7.3
[INFO] tweaked toml for crates.io crate libprosic 0.7.3 written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-10-09" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded feature-probe v0.1.1
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded bio-types v0.7.0
[INFO] [stderr]   Downloaded c_vec v1.0.12
[INFO] [stderr]   Downloaded statrs v0.9.0
[INFO] [stderr]   Downloaded itertools v0.5.10
[INFO] [stderr]   Downloaded cached v0.7.0
[INFO] [stderr]   Downloaded bv v0.10.0
[INFO] [stderr]   Downloaded rulinalg v0.2.2
[INFO] [stderr]   Downloaded rusty-machine v0.4.4
[INFO] [stderr]   Downloaded rust-htslib v0.22.0
[INFO] [stderr]   Downloaded GSL v1.1.0
[INFO] [stderr]   Downloaded ndarray v0.6.10
[INFO] [stderr]   Downloaded bio v0.24.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9d1a16551266d2516003858e34f56be159befbaebdcd4707b3fd9e051ee6245b
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "9d1a16551266d2516003858e34f56be159befbaebdcd4707b3fd9e051ee6245b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9d1a16551266d2516003858e34f56be159befbaebdcd4707b3fd9e051ee6245b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9d1a16551266d2516003858e34f56be159befbaebdcd4707b3fd9e051ee6245b", kill_on_drop: false }`
[INFO] [stdout] 9d1a16551266d2516003858e34f56be159befbaebdcd4707b3fd9e051ee6245b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 8f1ff1a543a36778d662b92bbb8f18c7350cca2eb7f6e0bd4e85ca0e80ccba67
[INFO] running `Command { std: "docker" "start" "-a" "8f1ff1a543a36778d662b92bbb8f18c7350cca2eb7f6e0bd4e85ca0e80ccba67", kill_on_drop: false }`
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bindgen v0.36.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling bio v0.24.0
[INFO] [stderr]    Compiling ndarray v0.6.10
[INFO] [stderr]    Compiling bytecount v0.3.2
[INFO] [stderr]    Compiling c_vec v1.0.12
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling cached v0.7.0
[INFO] [stderr]    Compiling clang-sys v0.22.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling GSL v1.1.0
[INFO] [stderr]    Compiling bv v0.10.0
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling num-complex v0.1.43
[INFO] [stderr]    Compiling ordered-float v1.1.0
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling statrs v0.9.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling bstr v0.2.13
[INFO] [stderr]    Compiling multimap v0.4.0
[INFO] [stderr]    Compiling rulinalg v0.2.2
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling rusty-machine v0.4.4
[INFO] [stderr]    Compiling rust-htslib v0.22.0
[INFO] [stderr]    Compiling libprosic v0.7.3 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:62:20
[INFO] [stdout]    |
[INFO] [stdout] 62 |     let variants = try!(utils::collect_variants(
[INFO] [stdout]    |                    ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:70:21
[INFO] [stdout]    |
[INFO] [stdout] 70 |     let chrom_seq = try!(reference_buffer.seq(&chrom));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:75:18
[INFO] [stdout]    |
[INFO] [stdout] 75 |             Some(try!(joint_model.pileup(
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/call/pairwise.rs:159:26
[INFO] [stdout]     |
[INFO] [stdout] 159 |         let mut writer = try!(csv::WriterBuilder::new()
[INFO] [stdout]     |                          ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/model/sample.rs:76:17
[INFO] [stdout]    |
[INFO] [stdout] 76 |                 try!(self.reader.fetch(tid, window_start, end));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/call/pairwise.rs:55:62
[INFO] [stdout]    |
[INFO] [stdout] 55 | ) -> Result<Vec<Option<model::PairPileup<'a, A, B, P>>>, Box<Error>>
[INFO] [stdout]    |                                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/call/pairwise.rs:116:21
[INFO] [stdout]     |
[INFO] [stdout] 116 | ) -> Result<(), Box<Error>>
[INFO] [stdout]     |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/estimation/alignment_properties.rs:40:68
[INFO] [stdout]    |
[INFO] [stdout] 40 |     pub fn estimate<R: bam::Read>(bam: &mut R) -> Result<Self, Box<Error>> {
[INFO] [stdout]    |                                                                    ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/estimation/alignment_properties.rs:142:33
[INFO] [stdout]     |
[INFO] [stdout] 142 |     ) -> Result<InsertSize, Box<Error>> {
[INFO] [stdout]     |                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/estimation/fdr/ev.rs:35:21
[INFO] [stdout]    |
[INFO] [stdout] 35 | ) -> Result<(), Box<Error>>
[INFO] [stdout]    |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/fragments.rs:52:89
[INFO] [stdout]    |
[INFO] [stdout] 52 | pub fn estimate_insert_size(left: &bam::Record, right: &bam::Record) -> Result<u32, Box<Error>> {
[INFO] [stdout]    |                                                                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/fragments.rs:56:68
[INFO] [stdout]    |
[INFO] [stdout] 56 |     let aln = |rec: &bam::Record, cigar| -> Result<(u32, u32), Box<Error>> {
[INFO] [stdout]    |                                                                    ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/fragments.rs:120:41
[INFO] [stdout]     |
[INFO] [stdout] 120 |     ) -> Result<(LogProb, LogProb), Box<Error>> {
[INFO] [stdout]     |                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/reads.rs:30:49
[INFO] [stdout]    |
[INFO] [stdout] 30 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>>;
[INFO] [stdout]    |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/reads.rs:56:49
[INFO] [stdout]    |
[INFO] [stdout] 56 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]    |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/reads.rs:101:49
[INFO] [stdout]     |
[INFO] [stdout] 101 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]     |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/reads.rs:169:49
[INFO] [stdout]     |
[INFO] [stdout] 169 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]     |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/sample.rs:68:82
[INFO] [stdout]    |
[INFO] [stdout] 68 |     pub fn fill(&mut self, chrom: &[u8], start: u32, end: u32) -> Result<(), Box<Error>> {
[INFO] [stdout]    |                                                                                  ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:220:39
[INFO] [stdout]     |
[INFO] [stdout] 220 |     ) -> Result<Vec<Observation>, Box<Error>> {
[INFO] [stdout]     |                                       ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:362:42
[INFO] [stdout]     |
[INFO] [stdout] 362 |     ) -> Result<Option<Observation>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:363:34
[INFO] [stdout]     |
[INFO] [stdout] 363 |         let mut evidence: RefMut<evidence::reads::AbstractReadEvidence> = match variant {
[INFO] [stdout]     |                                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn evidence::reads::AbstractReadEvidence`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:409:42
[INFO] [stdout]     |
[INFO] [stdout] 409 |     ) -> Result<Option<Observation>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:412:44
[INFO] [stdout]     |
[INFO] [stdout] 412 |          -> Result<(LogProb, LogProb), Box<Error>> {
[INFO] [stdout]     |                                            ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/mod.rs:275:41
[INFO] [stdout]     |
[INFO] [stdout] 275 |     ) -> Result<SinglePileup<A, P>, Box<Error>> {
[INFO] [stdout]     |                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/mod.rs:416:42
[INFO] [stdout]     |
[INFO] [stdout] 416 |     ) -> Result<PairPileup<A, B, P>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/utils.rs:27:46
[INFO] [stdout]    |
[INFO] [stdout] 27 | ) -> Result<Vec<Option<model::Variant>>, Box<Error>> {
[INFO] [stdout]    |                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:204:62
[INFO] [stdout]     |
[INFO] [stdout] 204 |     pub fn seq(&mut self, chrom: &[u8]) -> Result<&[u8], Box<Error>> {
[INFO] [stdout]     |                                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:232:39
[INFO] [stdout]     |
[INFO] [stdout] 232 | ) -> Result<Vec<Option<LogProb>>, Box<Error>> {
[INFO] [stdout]     |                                       ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:276:35
[INFO] [stdout]     |
[INFO] [stdout] 276 | ) -> Result<Vec<NotNan<f64>>, Box<Error>> {
[INFO] [stdout]     |                                   ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:317:21
[INFO] [stdout]     |
[INFO] [stdout] 317 | ) -> Result<(), Box<Error>> {
[INFO] [stdout]     |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:367:30
[INFO] [stdout]     |
[INFO] [stdout] 367 |     ) -> Result<Overlap, Box<Error>> {
[INFO] [stdout]     |                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred
[INFO] [stdout]    --> src/model/evidence/reads.rs:335:1
[INFO] [stdout]     |
[INFO] [stdout] 335 | / lazy_static! {
[INFO] [stdout] 336 | |     static ref PROB_CONFUSION: LogProb = LogProb::from(Prob(0.3333));
[INFO] [stdout] 337 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred
[INFO] [stdout]   --> src/model/priors/single_cell_bulk.rs:26:1
[INFO] [stdout]    |
[INFO] [stdout] 26 | / cached! {
[INFO] [stdout] 27 | |     AMPLIF_CACHE: UnboundCache<(AlleleFreq, usize, usize), LogProb> = UnboundCache::new();
[INFO] [stdout] 28 | |     // Lodato et al. 2015, Science, Supplementary Information, pages 8f and Fig. S5 (A, C, E)
[INFO] [stdout] 29 | |     // TODO: allow for non-default Lodato model parameters, e.g. learned from the data at hand
[INFO] [stdout] ...  |
[INFO] [stdout] 96 | |     }
[INFO] [stdout] 97 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 33 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 51.35s
[INFO] running `Command { std: "docker" "inspect" "8f1ff1a543a36778d662b92bbb8f18c7350cca2eb7f6e0bd4e85ca0e80ccba67", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8f1ff1a543a36778d662b92bbb8f18c7350cca2eb7f6e0bd4e85ca0e80ccba67", kill_on_drop: false }`
[INFO] [stdout] 8f1ff1a543a36778d662b92bbb8f18c7350cca2eb7f6e0bd4e85ca0e80ccba67
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-10-09" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e8cec4dc29c0a2704f27a149ecd09270725f885f1f719523e9903d43610a7243
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "e8cec4dc29c0a2704f27a149ecd09270725f885f1f719523e9903d43610a7243", kill_on_drop: false }`
[INFO] [stderr]    Compiling miniz-sys v0.1.12
[INFO] [stderr]    Compiling fern v0.4.4
[INFO] [stderr]    Compiling hyper v0.10.16
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:62:20
[INFO] [stdout]    |
[INFO] [stdout] 62 |     let variants = try!(utils::collect_variants(
[INFO] [stdout]    |                    ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:70:21
[INFO] [stdout]    |
[INFO] [stdout] 70 |     let chrom_seq = try!(reference_buffer.seq(&chrom));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:75:18
[INFO] [stdout]    |
[INFO] [stdout] 75 |             Some(try!(joint_model.pileup(
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/call/pairwise.rs:159:26
[INFO] [stdout]     |
[INFO] [stdout] 159 |         let mut writer = try!(csv::WriterBuilder::new()
[INFO] [stdout]     |                          ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/model/sample.rs:76:17
[INFO] [stdout]    |
[INFO] [stdout] 76 |                 try!(self.reader.fetch(tid, window_start, end));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/call/pairwise.rs:55:62
[INFO] [stdout]    |
[INFO] [stdout] 55 | ) -> Result<Vec<Option<model::PairPileup<'a, A, B, P>>>, Box<Error>>
[INFO] [stdout]    |                                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/call/pairwise.rs:116:21
[INFO] [stdout]     |
[INFO] [stdout] 116 | ) -> Result<(), Box<Error>>
[INFO] [stdout]     |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/estimation/alignment_properties.rs:40:68
[INFO] [stdout]    |
[INFO] [stdout] 40 |     pub fn estimate<R: bam::Read>(bam: &mut R) -> Result<Self, Box<Error>> {
[INFO] [stdout]    |                                                                    ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/estimation/alignment_properties.rs:142:33
[INFO] [stdout]     |
[INFO] [stdout] 142 |     ) -> Result<InsertSize, Box<Error>> {
[INFO] [stdout]     |                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/estimation/fdr/ev.rs:35:21
[INFO] [stdout]    |
[INFO] [stdout] 35 | ) -> Result<(), Box<Error>>
[INFO] [stdout]    |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/fragments.rs:52:89
[INFO] [stdout]    |
[INFO] [stdout] 52 | pub fn estimate_insert_size(left: &bam::Record, right: &bam::Record) -> Result<u32, Box<Error>> {
[INFO] [stdout]    |                                                                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/fragments.rs:56:68
[INFO] [stdout]    |
[INFO] [stdout] 56 |     let aln = |rec: &bam::Record, cigar| -> Result<(u32, u32), Box<Error>> {
[INFO] [stdout]    |                                                                    ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/fragments.rs:120:41
[INFO] [stdout]     |
[INFO] [stdout] 120 |     ) -> Result<(LogProb, LogProb), Box<Error>> {
[INFO] [stdout]     |                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/reads.rs:30:49
[INFO] [stdout]    |
[INFO] [stdout] 30 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>>;
[INFO] [stdout]    |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/reads.rs:56:49
[INFO] [stdout]    |
[INFO] [stdout] 56 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]    |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/reads.rs:101:49
[INFO] [stdout]     |
[INFO] [stdout] 101 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]     |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/reads.rs:169:49
[INFO] [stdout]     |
[INFO] [stdout] 169 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]     |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/sample.rs:68:82
[INFO] [stdout]    |
[INFO] [stdout] 68 |     pub fn fill(&mut self, chrom: &[u8], start: u32, end: u32) -> Result<(), Box<Error>> {
[INFO] [stdout]    |                                                                                  ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:220:39
[INFO] [stdout]     |
[INFO] [stdout] 220 |     ) -> Result<Vec<Observation>, Box<Error>> {
[INFO] [stdout]     |                                       ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:362:42
[INFO] [stdout]     |
[INFO] [stdout] 362 |     ) -> Result<Option<Observation>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:363:34
[INFO] [stdout]     |
[INFO] [stdout] 363 |         let mut evidence: RefMut<evidence::reads::AbstractReadEvidence> = match variant {
[INFO] [stdout]     |                                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn evidence::reads::AbstractReadEvidence`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:409:42
[INFO] [stdout]     |
[INFO] [stdout] 409 |     ) -> Result<Option<Observation>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:412:44
[INFO] [stdout]     |
[INFO] [stdout] 412 |          -> Result<(LogProb, LogProb), Box<Error>> {
[INFO] [stdout]     |                                            ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/mod.rs:275:41
[INFO] [stdout]     |
[INFO] [stdout] 275 |     ) -> Result<SinglePileup<A, P>, Box<Error>> {
[INFO] [stdout]     |                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/mod.rs:416:42
[INFO] [stdout]     |
[INFO] [stdout] 416 |     ) -> Result<PairPileup<A, B, P>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/utils.rs:27:46
[INFO] [stdout]    |
[INFO] [stdout] 27 | ) -> Result<Vec<Option<model::Variant>>, Box<Error>> {
[INFO] [stdout]    |                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:204:62
[INFO] [stdout]     |
[INFO] [stdout] 204 |     pub fn seq(&mut self, chrom: &[u8]) -> Result<&[u8], Box<Error>> {
[INFO] [stdout]     |                                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:232:39
[INFO] [stdout]     |
[INFO] [stdout] 232 | ) -> Result<Vec<Option<LogProb>>, Box<Error>> {
[INFO] [stdout]     |                                       ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:276:35
[INFO] [stdout]     |
[INFO] [stdout] 276 | ) -> Result<Vec<NotNan<f64>>, Box<Error>> {
[INFO] [stdout]     |                                   ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:317:21
[INFO] [stdout]     |
[INFO] [stdout] 317 | ) -> Result<(), Box<Error>> {
[INFO] [stdout]     |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:367:30
[INFO] [stdout]     |
[INFO] [stdout] 367 |     ) -> Result<Overlap, Box<Error>> {
[INFO] [stdout]     |                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred
[INFO] [stdout]    --> src/model/evidence/reads.rs:335:1
[INFO] [stdout]     |
[INFO] [stdout] 335 | / lazy_static! {
[INFO] [stdout] 336 | |     static ref PROB_CONFUSION: LogProb = LogProb::from(Prob(0.3333));
[INFO] [stdout] 337 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred
[INFO] [stdout]   --> src/model/priors/single_cell_bulk.rs:26:1
[INFO] [stdout]    |
[INFO] [stdout] 26 | / cached! {
[INFO] [stdout] 27 | |     AMPLIF_CACHE: UnboundCache<(AlleleFreq, usize, usize), LogProb> = UnboundCache::new();
[INFO] [stdout] 28 | |     // Lodato et al. 2015, Science, Supplementary Information, pages 8f and Fig. S5 (A, C, E)
[INFO] [stdout] 29 | |     // TODO: allow for non-default Lodato model parameters, e.g. learned from the data at hand
[INFO] [stdout] ...  |
[INFO] [stdout] 96 | |     }
[INFO] [stdout] 97 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 33 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling flate2 v0.2.20
[INFO] [stderr]    Compiling libprosic v0.7.3 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:62:20
[INFO] [stdout]    |
[INFO] [stdout] 62 |     let variants = try!(utils::collect_variants(
[INFO] [stdout]    |                    ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:70:21
[INFO] [stdout]    |
[INFO] [stdout] 70 |     let chrom_seq = try!(reference_buffer.seq(&chrom));
[INFO] [stdout]    |                     ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/call/pairwise.rs:75:18
[INFO] [stdout]    |
[INFO] [stdout] 75 |             Some(try!(joint_model.pileup(
[INFO] [stdout]    |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]    --> src/call/pairwise.rs:159:26
[INFO] [stdout]     |
[INFO] [stdout] 159 |         let mut writer = try!(csv::WriterBuilder::new()
[INFO] [stdout]     |                          ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated macro `try`: use the `?` operator instead
[INFO] [stdout]   --> src/model/sample.rs:76:17
[INFO] [stdout]    |
[INFO] [stdout] 76 |                 try!(self.reader.fetch(tid, window_start, end));
[INFO] [stdout]    |                 ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/call/pairwise.rs:55:62
[INFO] [stdout]    |
[INFO] [stdout] 55 | ) -> Result<Vec<Option<model::PairPileup<'a, A, B, P>>>, Box<Error>>
[INFO] [stdout]    |                                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/call/pairwise.rs:116:21
[INFO] [stdout]     |
[INFO] [stdout] 116 | ) -> Result<(), Box<Error>>
[INFO] [stdout]     |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/estimation/alignment_properties.rs:40:68
[INFO] [stdout]    |
[INFO] [stdout] 40 |     pub fn estimate<R: bam::Read>(bam: &mut R) -> Result<Self, Box<Error>> {
[INFO] [stdout]    |                                                                    ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/estimation/alignment_properties.rs:142:33
[INFO] [stdout]     |
[INFO] [stdout] 142 |     ) -> Result<InsertSize, Box<Error>> {
[INFO] [stdout]     |                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/estimation/fdr/ev.rs:35:21
[INFO] [stdout]    |
[INFO] [stdout] 35 | ) -> Result<(), Box<Error>>
[INFO] [stdout]    |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/fragments.rs:52:89
[INFO] [stdout]    |
[INFO] [stdout] 52 | pub fn estimate_insert_size(left: &bam::Record, right: &bam::Record) -> Result<u32, Box<Error>> {
[INFO] [stdout]    |                                                                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/fragments.rs:56:68
[INFO] [stdout]    |
[INFO] [stdout] 56 |     let aln = |rec: &bam::Record, cigar| -> Result<(u32, u32), Box<Error>> {
[INFO] [stdout]    |                                                                    ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/fragments.rs:120:41
[INFO] [stdout]     |
[INFO] [stdout] 120 |     ) -> Result<(LogProb, LogProb), Box<Error>> {
[INFO] [stdout]     |                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/reads.rs:30:49
[INFO] [stdout]    |
[INFO] [stdout] 30 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>>;
[INFO] [stdout]    |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/evidence/reads.rs:56:49
[INFO] [stdout]    |
[INFO] [stdout] 56 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]    |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/reads.rs:101:49
[INFO] [stdout]     |
[INFO] [stdout] 101 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]     |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/evidence/reads.rs:169:49
[INFO] [stdout]     |
[INFO] [stdout] 169 |     ) -> Result<Option<(LogProb, LogProb)>, Box<Error>> {
[INFO] [stdout]     |                                                 ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/model/sample.rs:68:82
[INFO] [stdout]    |
[INFO] [stdout] 68 |     pub fn fill(&mut self, chrom: &[u8], start: u32, end: u32) -> Result<(), Box<Error>> {
[INFO] [stdout]    |                                                                                  ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:220:39
[INFO] [stdout]     |
[INFO] [stdout] 220 |     ) -> Result<Vec<Observation>, Box<Error>> {
[INFO] [stdout]     |                                       ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:362:42
[INFO] [stdout]     |
[INFO] [stdout] 362 |     ) -> Result<Option<Observation>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:363:34
[INFO] [stdout]     |
[INFO] [stdout] 363 |         let mut evidence: RefMut<evidence::reads::AbstractReadEvidence> = match variant {
[INFO] [stdout]     |                                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn evidence::reads::AbstractReadEvidence`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:409:42
[INFO] [stdout]     |
[INFO] [stdout] 409 |     ) -> Result<Option<Observation>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/sample.rs:412:44
[INFO] [stdout]     |
[INFO] [stdout] 412 |          -> Result<(LogProb, LogProb), Box<Error>> {
[INFO] [stdout]     |                                            ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/mod.rs:275:41
[INFO] [stdout]     |
[INFO] [stdout] 275 |     ) -> Result<SinglePileup<A, P>, Box<Error>> {
[INFO] [stdout]     |                                         ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/model/mod.rs:416:42
[INFO] [stdout]     |
[INFO] [stdout] 416 |     ) -> Result<PairPileup<A, B, P>, Box<Error>> {
[INFO] [stdout]     |                                          ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/utils.rs:27:46
[INFO] [stdout]    |
[INFO] [stdout] 27 | ) -> Result<Vec<Option<model::Variant>>, Box<Error>> {
[INFO] [stdout]    |                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:204:62
[INFO] [stdout]     |
[INFO] [stdout] 204 |     pub fn seq(&mut self, chrom: &[u8]) -> Result<&[u8], Box<Error>> {
[INFO] [stdout]     |                                                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:232:39
[INFO] [stdout]     |
[INFO] [stdout] 232 | ) -> Result<Vec<Option<LogProb>>, Box<Error>> {
[INFO] [stdout]     |                                       ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:276:35
[INFO] [stdout]     |
[INFO] [stdout] 276 | ) -> Result<Vec<NotNan<f64>>, Box<Error>> {
[INFO] [stdout]     |                                   ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:317:21
[INFO] [stdout]     |
[INFO] [stdout] 317 | ) -> Result<(), Box<Error>> {
[INFO] [stdout]     |                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/utils.rs:367:30
[INFO] [stdout]     |
[INFO] [stdout] 367 |     ) -> Result<Overlap, Box<Error>> {
[INFO] [stdout]     |                              ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred
[INFO] [stdout]    --> src/model/evidence/reads.rs:335:1
[INFO] [stdout]     |
[INFO] [stdout] 335 | / lazy_static! {
[INFO] [stdout] 336 | |     static ref PROB_CONFUSION: LogProb = LogProb::from(Prob(0.3333));
[INFO] [stdout] 337 | | }
[INFO] [stdout]     | |_^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred
[INFO] [stdout]   --> src/model/priors/single_cell_bulk.rs:26:1
[INFO] [stdout]    |
[INFO] [stdout] 26 | / cached! {
[INFO] [stdout] 27 | |     AMPLIF_CACHE: UnboundCache<(AlleleFreq, usize, usize), LogProb> = UnboundCache::new();
[INFO] [stdout] 28 | |     // Lodato et al. 2015, Science, Supplementary Information, pages 8f and Fig. S5 (A, C, E)
[INFO] [stdout] 29 | |     // TODO: allow for non-default Lodato model parameters, e.g. learned from the data at hand
[INFO] [stdout] ...  |
[INFO] [stdout] 96 | |     }
[INFO] [stdout] 97 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: this method call currently resolves to `<&[T; N] as IntoIterator>::into_iter` (due to autoref coercions), but that might change in the future when `IntoIterator` impls for arrays are added.
[INFO] [stdout]    --> src/model/sample.rs:612:79
[INFO] [stdout]     |
[INFO] [stdout] 612 |         for (record, true_alt_prob) in records.into_iter().zip(true_alt_probs.into_iter()) {
[INFO] [stdout]     |                                                                               ^^^^^^^^^ help: use `.iter()` instead of `.into_iter()` to avoid ambiguity: `iter`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(array_into_iter)]` on by default
[INFO] [stdout]     = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release!
[INFO] [stdout]     = note: for more information, see issue #66145 <https://github.com/rust-lang/rust/issues/66145>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: linking with `cc` failed: exit code: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.0.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.1.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.10.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.11.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.12.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.13.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.14.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.15.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.2.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.3.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.4.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.5.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.6.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.7.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.8.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.libprosic.5tw43gf4-cgu.9.rcgu.o" "-o" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77" "/opt/rustwide/target/debug/deps/libprosic-5ce753bf6b3b7d77.h7aljvjs2e8qn26.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/build/miniz-sys-916b5dda450a9fb5/out" "-L" "/opt/rustwide/target/debug/build/rust-htslib-35efb7d21cfb5322/out" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-b54924357a2c2abe/out/lib" "-L" "/usr/lib/x86_64-linux-gnu" "-L" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libtest-8c293b579fdb38fc.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libterm-ef7d6114ddb41a44.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgetopts-16c582eb506314ba.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunicode_width-6abbb81e68fea101.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_std-4437f76c42770bc3.rlib" "/opt/rustwide/target/debug/deps/libenv_logger-65be0f1c576b6383.rlib" "/opt/rustwide/target/debug/deps/libregex-a974d461107e92d8.rlib" "/opt/rustwide/target/debug/deps/libutf8_ranges-84ed10061b506991.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-63e7e7ed077eef28.rlib" "/opt/rustwide/target/debug/deps/libthread_local-79569035872496f2.rlib" "/opt/rustwide/target/debug/deps/libthread_id-9c31056c5ee398a3.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-045a7897b7980bf6.rlib" "/opt/rustwide/target/debug/deps/libmemchr-1f16fd2b30d03c07.rlib" "/opt/rustwide/target/debug/deps/libcached-f83499e9df0057d5.rlib" "/opt/rustwide/target/debug/deps/libregex-905b8d3206476f39.rlib" "/opt/rustwide/target/debug/deps/libutf8_ranges-be40cb5dc3f0ecb6.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-5ac0967dc3296fed.rlib" "/opt/rustwide/target/debug/deps/libucd_util-84c9c8f4a23971c2.rlib" "/opt/rustwide/target/debug/deps/libthread_local-5aeca77422c2c02a.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-bf56872a80c7637d.rlib" "/opt/rustwide/target/debug/deps/librusty_machine-7500f00d22b0f123.rlib" "/opt/rustwide/target/debug/deps/librulinalg-6739b7e9024ae20b.rlib" "/opt/rustwide/target/debug/deps/libnum-27683902d874c23a.rlib" "/opt/rustwide/target/debug/deps/libnum_iter-9db107b0c9a0cc9d.rlib" "/opt/rustwide/target/debug/deps/libndarray-3dd7f07f1d4142c7.rlib" "/opt/rustwide/target/debug/deps/libnum_complex-190ea64bbe2241bc.rlib" "/opt/rustwide/target/debug/deps/libnum_traits-8da4bbae52aa1001.rlib" "/opt/rustwide/target/debug/deps/libitertools-9f4d44a695a2b234.rlib" "/opt/rustwide/target/debug/deps/libapprox-43cd5c53f5296d66.rlib" "/opt/rustwide/target/debug/deps/librgsl-d07bbba9f0b982dd.rlib" "/opt/rustwide/target/debug/deps/libc_vec-287aaf910ec28e78.rlib" "/opt/rustwide/target/debug/deps/liblog-61b6b7789e2ddc7f.rlib" "/opt/rustwide/target/debug/deps/liblog-51760c8d9f0a0b95.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-727e218cbe4629d5.rlib" "/opt/rustwide/target/debug/deps/librust_htslib-57a048125575a1f4.rlib" "/opt/rustwide/target/debug/deps/liblzma_sys-2c67f31863dd03ee.rlib" "/opt/rustwide/target/debug/deps/libbzip2_sys-6622c3e272911686.rlib" "/opt/rustwide/target/debug/deps/liblibz_sys-e69469cb95bc2664.rlib" "/opt/rustwide/target/debug/deps/liblinear_map-b61e5b71d4892b74.rlib" "/opt/rustwide/target/debug/deps/liburl-203136f6c2d1799c.rlib" "/opt/rustwide/target/debug/deps/libpercent_encoding-88e6a83f9628f22c.rlib" "/opt/rustwide/target/debug/deps/libidna-6b8e775a36debbf0.rlib" "/opt/rustwide/target/debug/deps/libunicode_normalization-6eab24ff42a663a5.rlib" "/opt/rustwide/target/debug/deps/libtinyvec-6953c3e0e16f4195.rlib" "/opt/rustwide/target/debug/deps/libunicode_bidi-378825f0a341ccf9.rlib" "/opt/rustwide/target/debug/deps/libmatches-bbcc1f6f6a0b4874.rlib" "/opt/rustwide/target/debug/deps/liblazy_static-2ea69cae54b65af6.rlib" "/opt/rustwide/target/debug/deps/libitertools-0a81bd6ecdc3571c.rlib" "/opt/rustwide/target/debug/deps/libieee754-835eb73baa575f73.rlib" "/opt/rustwide/target/debug/deps/libbitflags-e1adf2d5a3c5eab4.rlib" "/opt/rustwide/target/debug/deps/libbio-c5dff4e5a4bc7036.rlib" "/opt/rustwide/target/debug/deps/libfxhash-bc35a5da7240a59b.rlib" "/opt/rustwide/target/debug/deps/libvec_map-d73a53a980b74ce0.rlib" "/opt/rustwide/target/debug/deps/libstatrs-2fc52f0418c769cc.rlib" "/opt/rustwide/target/debug/deps/librand-a848312aea31c7b0.rlib" "/opt/rustwide/target/debug/deps/librand-2bd7f45d62b669b3.rlib" "/opt/rustwide/target/debug/deps/liblibc-8d199805cc61389a.rlib" "/opt/rustwide/target/debug/deps/libfnv-c2227cfbdd7b9572.rlib" "/opt/rustwide/target/debug/deps/libbv-cc8967b89503b9bd.rlib" "/opt/rustwide/target/debug/deps/libordered_float-146a723ca464b49b.rlib" "/opt/rustwide/target/debug/deps/libnum_integer-d4a4d703d73e45ec.rlib" "/opt/rustwide/target/debug/deps/libnewtype_derive-133977346bd0001a.rlib" "/opt/rustwide/target/debug/deps/libndarray-e6a096b2ab2416f5.rlib" "/opt/rustwide/target/debug/deps/libnum_complex-5149142014003805.rlib" "/opt/rustwide/target/debug/deps/libmatrixmultiply-62b42c300a06e887.rlib" "/opt/rustwide/target/debug/deps/librawpointer-6e70b81014f9f8f5.rlib" "/opt/rustwide/target/debug/deps/libmultimap-3654b290684c256b.rlib" "/opt/rustwide/target/debug/deps/libitertools_num-3e36c06148c2a6b4.rlib" "/opt/rustwide/target/debug/deps/libitertools-c2d3155d1f2a71d7.rlib" "/opt/rustwide/target/debug/deps/libeither-fd82c7732f36b0c8.rlib" "/opt/rustwide/target/debug/deps/libcustom_derive-2cd77fb743b75f42.rlib" "/opt/rustwide/target/debug/deps/libcsv-aadb422520a8183a.rlib" "/opt/rustwide/target/debug/deps/libryu-f59829dd55cb0771.rlib" "/opt/rustwide/target/debug/deps/libitoa-2e05c866ee66a047.rlib" "/opt/rustwide/target/debug/deps/libcsv_core-b2f0d5fa81297eae.rlib" "/opt/rustwide/target/debug/deps/libbstr-c973eb36a89325d8.rlib" "/opt/rustwide/target/debug/deps/libregex_automata-046db2e2bbcd055f.rlib" "/opt/rustwide/target/debug/deps/libbyteorder-f7f925fcf7e16859.rlib" "/opt/rustwide/target/debug/deps/libbytecount-6c8e9209aefdc595.rlib" "/opt/rustwide/target/debug/deps/libbit_set-471554e6772bd36b.rlib" "/opt/rustwide/target/debug/deps/libbit_vec-a2e0abdfcd39fe2b.rlib" "/opt/rustwide/target/debug/deps/libapprox-1da3350d1c906e05.rlib" "/opt/rustwide/target/debug/deps/libnum_traits-2ea07b0bbd9f52bb.rlib" "/opt/rustwide/target/debug/deps/libbio_types-c495babdb8bedcec.rlib" "/opt/rustwide/target/debug/deps/libserde-189e5d623db3e1fc.rlib" "/opt/rustwide/target/debug/deps/libregex-0457da9ac927e2b3.rlib" "/opt/rustwide/target/debug/deps/libthread_local-b5a8520d8d18b76f.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-541c4040d42da1d1.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-c8123315f49f23be.rlib" "/opt/rustwide/target/debug/deps/libmemchr-8df1994bb164e7a2.rlib" "/opt/rustwide/target/debug/deps/liblazy_static-03dc560a77c5aa3e.rlib" "/opt/rustwide/target/debug/deps/libquick_error-e15ea4fce168f797.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-3532beb752f910d7.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-3529ece450b7f3c6.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-23e8f582a6744f80.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-5e7e0793b29cbf78.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-253e0736424ceb78.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-b6fd484888124c85.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-cca4d20e4b53839c.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-0a7401891c2a4f50.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-efbb25e073df787e.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-25965457612624bc.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-09058283ea779342.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-ab973dacc0513511.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-b437d6640b1f764b.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-8cc0b2380206399c.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-727cdf2b6a468113.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cf4d442d877ea2f4.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/beta-2020-10-09-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-7e5b6df427ca977c.rlib" "-Wl,-Bdynamic" "-llzma" "-lz" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil"
[INFO] [stdout]   = note: /usr/bin/ld: /opt/rustwide/target/debug/deps/librgsl-d07bbba9f0b982dd.rlib(rgsl-d07bbba9f0b982dd.rgsl.1e1bub4p-cgu.10.rcgu.o): in function `rgsl::randist::gaussian::gaussian_pdf':
[INFO] [stdout]           /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/randist/gaussian.rs:20: undefined reference to `gsl_ran_gaussian_pdf'
[INFO] [stdout]           /usr/bin/ld: /opt/rustwide/target/debug/deps/librgsl-d07bbba9f0b982dd.rlib(rgsl-d07bbba9f0b982dd.rgsl.1e1bub4p-cgu.10.rcgu.o): in function `rgsl::randist::gaussian::ugaussian_P':
[INFO] [stdout]           /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/randist/gaussian.rs:73: undefined reference to `gsl_cdf_ugaussian_P'
[INFO] [stdout]           /usr/bin/ld: /opt/rustwide/target/debug/deps/librgsl-d07bbba9f0b982dd.rlib(rgsl-d07bbba9f0b982dd.rgsl.1e1bub4p-cgu.9.rcgu.o): in function `rgsl::error::erfc':
[INFO] [stdout]           /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/error.rs:28: undefined reference to `gsl_sf_erfc'
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to previous error; 34 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `libprosic`
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] running `Command { std: "docker" "inspect" "e8cec4dc29c0a2704f27a149ecd09270725f885f1f719523e9903d43610a7243", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e8cec4dc29c0a2704f27a149ecd09270725f885f1f719523e9903d43610a7243", kill_on_drop: false }`
[INFO] [stdout] e8cec4dc29c0a2704f27a149ecd09270725f885f1f719523e9903d43610a7243
