[INFO] cloning repository https://github.com/Arkanosis/bamrescue [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Arkanosis/bamrescue" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 39995ea0358fe31788d4f0f11cdaf99d95fe262f [INFO] testing Arkanosis/bamrescue against 1.47.0 for beta-1.48-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue" "/workspace/builds/worker-11/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-11/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Arkanosis/bamrescue on toolchain 1.47.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.47.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Arkanosis/bamrescue [INFO] finished tweaking git repo https://github.com/Arkanosis/bamrescue [INFO] tweaked toml for git repo https://github.com/Arkanosis/bamrescue written to /workspace/builds/worker-11/source/Cargo.toml [INFO] crate git repo https://github.com/Arkanosis/bamrescue already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.47.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.47.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 28005ed940cc2d016bb0b497d91d64fa6d40c0b12f22f473310eacec46249783 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "28005ed940cc2d016bb0b497d91d64fa6d40c0b12f22f473310eacec46249783", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "28005ed940cc2d016bb0b497d91d64fa6d40c0b12f22f473310eacec46249783", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "28005ed940cc2d016bb0b497d91d64fa6d40c0b12f22f473310eacec46249783", kill_on_drop: false }` [INFO] [stdout] 28005ed940cc2d016bb0b497d91d64fa6d40c0b12f22f473310eacec46249783 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.47.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ff6a2fb675f865a8e3268e2eb181c857a64ecfddb0a61a9c5b84c4530ed0f29e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ff6a2fb675f865a8e3268e2eb181c857a64ecfddb0a61a9c5b84c4530ed0f29e", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.39 [INFO] [stderr] Compiling build_const v0.2.1 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling terminal_size v0.1.13 [INFO] [stderr] Compiling termios v0.3.2 [INFO] [stderr] Compiling inflate v0.4.5 [INFO] [stderr] Compiling futures-cpupool v0.1.8 [INFO] [stderr] Compiling crc v1.8.1 [INFO] [stderr] Compiling console v0.12.0 [INFO] [stderr] Compiling indicatif v0.15.0 [INFO] [stderr] Compiling serde_derive v1.0.115 [INFO] [stderr] Compiling serde v1.0.115 [INFO] [stderr] Compiling docopt v1.1.0 [INFO] [stderr] Compiling bamrescue v0.3.0-dev (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 44.73s [INFO] running `Command { std: "docker" "inspect" "ff6a2fb675f865a8e3268e2eb181c857a64ecfddb0a61a9c5b84c4530ed0f29e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ff6a2fb675f865a8e3268e2eb181c857a64ecfddb0a61a9c5b84c4530ed0f29e", kill_on_drop: false }` [INFO] [stdout] ff6a2fb675f865a8e3268e2eb181c857a64ecfddb0a61a9c5b84c4530ed0f29e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.47.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4ee4520ec497db69bf9be3d3b5745bc70c3590436f15a2b4a38903a9de62579a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4ee4520ec497db69bf9be3d3b5745bc70c3590436f15a2b4a38903a9de62579a", kill_on_drop: false }` [INFO] [stderr] Compiling bamrescue v0.3.0-dev (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.72s [INFO] running `Command { std: "docker" "inspect" "4ee4520ec497db69bf9be3d3b5745bc70c3590436f15a2b4a38903a9de62579a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4ee4520ec497db69bf9be3d3b5745bc70c3590436f15a2b4a38903a9de62579a", kill_on_drop: false }` [INFO] [stdout] 4ee4520ec497db69bf9be3d3b5745bc70c3590436f15a2b4a38903a9de62579a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.47.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 9e6243b1277b68bc87fcd990a31d4c51e820564b607ad04c9588fbac3b985676 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9e6243b1277b68bc87fcd990a31d4c51e820564b607ad04c9588fbac3b985676", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.27s [INFO] [stdout] running 0 tests [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bamrescue-47db98626a9f128f [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bamrescue-d7756147cf8615d0 [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stderr] Running /opt/rustwide/target/debug/deps/check-3d82b2a08aa31921 [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rescue-52fd71124ca20328 [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/version-83ea137f3d979951 [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] Doc-tests bamrescue [INFO] [stdout] test version ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "9e6243b1277b68bc87fcd990a31d4c51e820564b607ad04c9588fbac3b985676", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9e6243b1277b68bc87fcd990a31d4c51e820564b607ad04c9588fbac3b985676", kill_on_drop: false }` [INFO] [stdout] 9e6243b1277b68bc87fcd990a31d4c51e820564b607ad04c9588fbac3b985676