[INFO] fetching crate hdf5-rs 0.2.0... [INFO] documenting hdf5-rs-0.2.0 against 1.46.0 for beta-1.47-rustdoc-1 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 1.46.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.46.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.46.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.46.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.46.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7898dd8ea51e072e1513e132f9137f9e2cb5006cc47175eaf4cd9fab3289daa9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7898dd8ea51e072e1513e132f9137f9e2cb5006cc47175eaf4cd9fab3289daa9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7898dd8ea51e072e1513e132f9137f9e2cb5006cc47175eaf4cd9fab3289daa9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7898dd8ea51e072e1513e132f9137f9e2cb5006cc47175eaf4cd9fab3289daa9", kill_on_drop: false }` [INFO] [stdout] 7898dd8ea51e072e1513e132f9137f9e2cb5006cc47175eaf4cd9fab3289daa9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.46.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1131553236fee7963c0244e165945de87d75dbe9e183e959c7dd038df1fe57fe [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1131553236fee7963c0244e165945de87d75dbe9e183e959c7dd038df1fe57fe", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379.build_script_build.5gz03y0k-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379.build_script_build.5gz03y0k-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379.build_script_build.5gz03y0k-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379.build_script_build.5gz03y0k-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379.build_script_build.5gz03y0k-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379" "/opt/rustwide/target/debug/build/libhdf5-sys-ff5ccda807195379/build_script_build-ff5ccda807195379.4sded6l6vxzedavr.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d4639802fe218e45.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-cf0f33af3a901778.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-daf8c2d692e6eca4.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-24e8f97647425e48.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-85ed7d2b484c05a9.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-89de2c581262ec09.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-3b0db98e62ed7d75.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-c60847f9a163de82.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-0bb9b63424f4fc5d.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-3f74d829e37fa40e.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-0e9d83ff06f1a7ad.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-2c8c904efaf7c40b.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-cbfb51de52131460.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-97497c26fddb7882.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f1a9d8c443e20b5e.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96.build_script_build.cu6hoxk9-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96.build_script_build.cu6hoxk9-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96.build_script_build.cu6hoxk9-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96.build_script_build.cu6hoxk9-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96.build_script_build.cu6hoxk9-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96" "/opt/rustwide/target/debug/build/hdf5-rs-36daf0becdd5ca96/build_script_build-36daf0becdd5ca96.2jhkzyjjxuhnp413.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d4639802fe218e45.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-cf0f33af3a901778.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-daf8c2d692e6eca4.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-24e8f97647425e48.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-85ed7d2b484c05a9.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-89de2c581262ec09.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-3b0db98e62ed7d75.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-c60847f9a163de82.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-0bb9b63424f4fc5d.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-3f74d829e37fa40e.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-0e9d83ff06f1a7ad.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-2c8c904efaf7c40b.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-cbfb51de52131460.rlib" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-97497c26fddb7882.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/1.46.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f1a9d8c443e20b5e.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "1131553236fee7963c0244e165945de87d75dbe9e183e959c7dd038df1fe57fe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1131553236fee7963c0244e165945de87d75dbe9e183e959c7dd038df1fe57fe", kill_on_drop: false }` [INFO] [stdout] 1131553236fee7963c0244e165945de87d75dbe9e183e959c7dd038df1fe57fe