[INFO] cloning repository https://github.com/Helkafen/vcf_pwm [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Helkafen/vcf_pwm" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 613ddfd1be4616c57256bab17a4a8e7d263627cf [INFO] documenting Helkafen/vcf_pwm against 1.46.0 for beta-1.47-rustdoc-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm" "/workspace/builds/worker-8/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-8/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Helkafen/vcf_pwm on toolchain 1.46.0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.46.0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] finished tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] tweaked toml for git repo https://github.com/Helkafen/vcf_pwm written to /workspace/builds/worker-8/source/Cargo.toml [INFO] crate git repo https://github.com/Helkafen/vcf_pwm already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.46.0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.46.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5ce8c59781d68d5286176208b2a0a46071b0095a963cd083005a30a919a7a904 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5ce8c59781d68d5286176208b2a0a46071b0095a963cd083005a30a919a7a904", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5ce8c59781d68d5286176208b2a0a46071b0095a963cd083005a30a919a7a904", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5ce8c59781d68d5286176208b2a0a46071b0095a963cd083005a30a919a7a904", kill_on_drop: false }` [INFO] [stdout] 5ce8c59781d68d5286176208b2a0a46071b0095a963cd083005a30a919a7a904 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+1.46.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 13efbaa003539a9ae953dc3c578d139fda786269c59a0290a3bef78ee74d10cd [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "13efbaa003539a9ae953dc3c578d139fda786269c59a0290a3bef78ee74d10cd", kill_on_drop: false }` [INFO] [stderr] Compiling syn v0.15.39 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling serde v1.0.94 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking owning_ref v0.2.4 [INFO] [stderr] Compiling bio v0.28.2 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking strum v0.13.0 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking crossbeam v0.2.12 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Checking smallvec v0.3.4 [INFO] [stderr] Compiling backtrace-sys v0.1.30 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking thread-id v3.3.0 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Checking subprocess v0.1.18 [INFO] [stderr] Checking regex-automata v0.1.7 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking aho-corasick v0.7.6 [INFO] [stderr] Checking csv-core v0.1.6 [INFO] [stderr] Checking flate2 v1.0.9 [INFO] [stderr] Checking rand v0.3.23 [INFO] [stderr] Checking parking_lot_core v0.2.14 [INFO] [stderr] Checking backtrace v0.3.32 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Checking parking_lot v0.3.8 [INFO] [stderr] Checking failure v0.1.5 [INFO] [stderr] Checking bgzip v0.0.3 [INFO] [stderr] Checking multiqueue v0.3.2 [INFO] [stderr] Checking which v2.0.1 [INFO] [stderr] Checking regex v1.3.1 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling serde_derive v1.0.94 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling strum_macros v0.13.0 [INFO] [stderr] Checking snafu v0.5.0 [INFO] [stderr] Checking bstr v0.2.1 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking clap v2.33.0 [INFO] [stderr] Checking csv v1.1.1 [INFO] [stderr] Compiling rust-htslib v0.26.1 [INFO] [stderr] Documenting find-tfbs v1.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 46s [INFO] running `Command { std: "docker" "inspect" "13efbaa003539a9ae953dc3c578d139fda786269c59a0290a3bef78ee74d10cd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "13efbaa003539a9ae953dc3c578d139fda786269c59a0290a3bef78ee74d10cd", kill_on_drop: false }` [INFO] [stdout] 13efbaa003539a9ae953dc3c578d139fda786269c59a0290a3bef78ee74d10cd