[INFO] fetching crate yacrd 0.6.2...
[INFO] testing yacrd-0.6.2 against beta-2020-07-24 for beta-1.46-1
[INFO] extracting crate yacrd 0.6.2 into /workspace/builds/worker-9/source
[INFO] validating manifest of crates.io crate yacrd 0.6.2 on toolchain beta-2020-07-24
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate yacrd 0.6.2
[INFO] finished tweaking crates.io crate yacrd 0.6.2
[INFO] tweaked toml for crates.io crate yacrd 0.6.2 written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] crate crates.io crate yacrd 0.6.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 950b3c2cd841ee6888ad23d5c1fa63aa1d44c02b7f7e1ba38c7d0696b2aea15a
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "950b3c2cd841ee6888ad23d5c1fa63aa1d44c02b7f7e1ba38c7d0696b2aea15a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "950b3c2cd841ee6888ad23d5c1fa63aa1d44c02b7f7e1ba38c7d0696b2aea15a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "950b3c2cd841ee6888ad23d5c1fa63aa1d44c02b7f7e1ba38c7d0696b2aea15a", kill_on_drop: false }`
[INFO] [stdout] 950b3c2cd841ee6888ad23d5c1fa63aa1d44c02b7f7e1ba38c7d0696b2aea15a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 99c9f35f8676d6dbc52dec5b142d4c4df9b63286a1d4a95a54e607052009212f
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "99c9f35f8676d6dbc52dec5b142d4c4df9b63286a1d4a95a54e607052009212f", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v1.0.34
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling bio v0.31.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling bytecount v0.6.0
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling os_str_bytes v2.3.1
[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling proc-macro-error-attr v0.4.12
[INFO] [stderr]    Compiling proc-macro-error v0.4.12
[INFO] [stderr]    Compiling getrandom v0.1.14
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling flate2 v1.0.16
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling bzip2 v0.3.3
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling xz2 v0.1.6
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stderr]    Compiling syn-mid v0.5.0
[INFO] [stderr]    Compiling serde_derive v1.0.114
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.20
[INFO] [stderr]    Compiling snafu-derive v0.6.8
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling strum_macros v0.18.0
[INFO] [stderr]    Compiling thiserror v1.0.20
[INFO] [stderr]    Compiling niffler v2.2.0
[INFO] [stderr]    Compiling clap_derive v3.0.0-beta.1
[INFO] [stderr]    Compiling snafu v0.6.8
[INFO] [stderr]    Compiling serde v1.0.114
[INFO] [stderr]    Compiling bstr v0.2.13
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling multimap v0.6.0
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling clap v3.0.0-beta.1
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling yacrd v0.6.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 56.12s
[INFO] running `Command { std: "docker" "inspect" "99c9f35f8676d6dbc52dec5b142d4c4df9b63286a1d4a95a54e607052009212f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "99c9f35f8676d6dbc52dec5b142d4c4df9b63286a1d4a95a54e607052009212f", kill_on_drop: false }`
[INFO] [stdout] 99c9f35f8676d6dbc52dec5b142d4c4df9b63286a1d4a95a54e607052009212f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5357c7f6e38cd0e80532cf5af35e41814163632957e5eae2ec4f1f787ca7b556
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "5357c7f6e38cd0e80532cf5af35e41814163632957e5eae2ec4f1f787ca7b556", kill_on_drop: false }`
[INFO] [stderr]    Compiling tempfile v3.1.0
[INFO] [stderr]    Compiling yacrd v0.6.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 4.23s
[INFO] running `Command { std: "docker" "inspect" "5357c7f6e38cd0e80532cf5af35e41814163632957e5eae2ec4f1f787ca7b556", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5357c7f6e38cd0e80532cf5af35e41814163632957e5eae2ec4f1f787ca7b556", kill_on_drop: false }`
[INFO] [stdout] 5357c7f6e38cd0e80532cf5af35e41814163632957e5eae2ec4f1f787ca7b556
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] e334e35bd9bc9a022d3cd4878b6936d148dffb80a2b6b89bc4da69ada24a4c8c
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "e334e35bd9bc9a022d3cd4878b6936d148dffb80a2b6b89bc4da69ada24a4c8c", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.27s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/yacrd-64d108fc77277405
[INFO] [stdout] 
[INFO] [stdout] running 52 tests
[INFO] [stdout] test editor::filter::tests::fastq_file ... ok
[INFO] [stdout] test editor::extract::tests::paf_file ... ok
[INFO] [stdout] test editor::filter::tests::m4_file ... ok
[INFO] [stdout] test editor::tests::read_type_assignation ... ok
[INFO] [stdout] test editor::scrubbing::tests::fastq_keep_middle ... ok
[INFO] [stdout] test stack::tests::coverage_upper_than_0 ... ok
[INFO] [stdout] test editor::scrubbing::tests::fasta_keep_begin_end ... ok
[INFO] [stdout] test editor::scrubbing::tests::fasta_keep_middle ... ok
[INFO] [stdout] test editor::extract::tests::fasta_file ... ok
[INFO] [stdout] test editor::scrubbing::tests::fastq_keep_begin_end ... ok
[INFO] [stdout] test stack::tests::from_overlap ... ok
[INFO] [stdout] test editor::split::tests::fasta_file ... ok
[INFO] [stdout] test editor::filter::tests::fasta_file ... ok
[INFO] [stdout] test editor::split::tests::fastq_file ... ok
[INFO] [stdout] test editor::extract::tests::fastq_file ... ok
[INFO] [stdout] test editor::extract::tests::m4_file ... ok
[INFO] [stdout] test editor::filter::tests::paf_file ... ok
[INFO] [stdout] test reads2ovl::tests::paf ... ok
[INFO] [stdout] test util::tests::file_type::fastq ... ok
[INFO] [stdout] test util::tests::file_type::fq ... ok
[INFO] [stdout] test util::tests::file_type::fastq_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::fa_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::fasta ... ok
[INFO] [stdout] test util::tests::file_type::fasta_with_nopoint ... ok
[INFO] [stdout] test util::tests::file_type::fastq_with_nopoint ... ok
[INFO] [stdout] test util::tests::file_type::fasta_with_other_ext ... ok
[INFO] [stdout] test reads2ovl::tests::m4 ... ok
[INFO] [stdout] test stack::tests::from_report ... ok
[INFO] [stdout] test util::tests::file_type::fq_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::paf ... ok
[INFO] [stdout] test util::tests::file_type::paf_with_nopoint ... ok
[INFO] [stdout] test util::tests::file_type::paf_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::mhap_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::mhap_with_nopoint ... ok
[INFO] [stdout] test util::tests::file_type::m4_with_nopoint ... ok
[INFO] [stdout] test util::tests::file_type::fa ... ok
[INFO] [stdout] test util::tests::file_type::fq_with_nopoint ... ok
[INFO] [stdout] test stack::tests::failled_correctly_on_corrupt_yacrd ... ok
[INFO] [stdout] test util::tests::file_type::fa_with_nopoint ... ok
[INFO] [stdout] test util::tests::file_type::yacrd_overlap_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::mhap ... ok
[INFO] [stdout] test util::tests::file_type::m4_with_other_ext ... ok
[INFO] [stdout] test util::tests::file_type::yacrd_overlap_with_nopoint ... ok
[INFO] [stdout] test util::tests::str2u32::failed ... ok
[INFO] [stdout] test util::tests::file_type::m4 ... ok
[INFO] [stdout] test util::tests::str2u32::succeeded ... ok
[INFO] [stdout] test util::tests::str2u64::failed ... ok
[INFO] [stdout] test util::tests::str2u64::succeeded ... ok
[INFO] [stdout] test util::tests::str2usize::failed ... ok
[INFO] [stdout] test util::tests::file_type::yacrd_overlap ... ok
[INFO] [stdout] test util::tests::str2usize::succeeded ... ok
[INFO] [stdout] test stack::tests::perfect_read_in_report ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 52 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "e334e35bd9bc9a022d3cd4878b6936d148dffb80a2b6b89bc4da69ada24a4c8c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e334e35bd9bc9a022d3cd4878b6936d148dffb80a2b6b89bc4da69ada24a4c8c", kill_on_drop: false }`
[INFO] [stdout] e334e35bd9bc9a022d3cd4878b6936d148dffb80a2b6b89bc4da69ada24a4c8c