[INFO] crate rumi 0.2.1 is already in cache [INFO] testing rumi-0.2.1 against beta-2020-07-24 for beta-1.46-1 [INFO] extracting crate rumi 0.2.1 into /workspace/builds/worker-2/source [INFO] validating manifest of crates.io crate rumi 0.2.1 on toolchain beta-2020-07-24 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate rumi 0.2.1 [INFO] finished tweaking crates.io crate rumi 0.2.1 [INFO] tweaked toml for crates.io crate rumi 0.2.1 written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate crates.io crate rumi 0.2.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 80ac75ac47da02382de157e8d03253ea00981dc57f9c34e7a7036281fe810dae [INFO] running `Command { std: "docker" "start" "-a" "80ac75ac47da02382de157e8d03253ea00981dc57f9c34e7a7036281fe810dae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "80ac75ac47da02382de157e8d03253ea00981dc57f9c34e7a7036281fe810dae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80ac75ac47da02382de157e8d03253ea00981dc57f9c34e7a7036281fe810dae", kill_on_drop: false }` [INFO] [stdout] 80ac75ac47da02382de157e8d03253ea00981dc57f9c34e7a7036281fe810dae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 89074db6a490bc90213348350ef1b19183ea7be14d71ad9616755ec41b233cc1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "89074db6a490bc90213348350ef1b19183ea7be14d71ad9616755ec41b233cc1", kill_on_drop: false }` [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Compiling log v0.4.7 [INFO] [stderr] Compiling syn v0.15.39 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling arrayvec v0.4.11 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling nodrop v0.1.13 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Compiling serde v1.0.97 [INFO] [stderr] Compiling smallvec v0.6.10 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling rayon-core v1.5.0 [INFO] [stderr] Compiling basebits v1.2.0 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Compiling crossbeam-utils v0.6.6 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling unicode-normalization v0.1.8 [INFO] [stderr] Compiling atty v0.2.13 [INFO] [stderr] Compiling which v3.1.0 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling rustc-hash v1.0.1 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling backtrace v0.3.40 [INFO] [stderr] Compiling crossbeam-epoch v0.7.2 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling crossbeam-deque v0.6.3 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling rayon v1.1.0 [INFO] [stderr] Compiling url v2.1.0 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.97 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling rust-htslib v0.26.0 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling rumi v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 48s [INFO] running `Command { std: "docker" "inspect" "89074db6a490bc90213348350ef1b19183ea7be14d71ad9616755ec41b233cc1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "89074db6a490bc90213348350ef1b19183ea7be14d71ad9616755ec41b233cc1", kill_on_drop: false }` [INFO] [stdout] 89074db6a490bc90213348350ef1b19183ea7be14d71ad9616755ec41b233cc1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4d2c0f8c8ef68c4db3d4d31432199f2b8fa45c44aa323bce91b1daa60bfcaf87 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4d2c0f8c8ef68c4db3d4d31432199f2b8fa45c44aa323bce91b1daa60bfcaf87", kill_on_drop: false }` [INFO] [stderr] Compiling rumi v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.59s [INFO] running `Command { std: "docker" "inspect" "4d2c0f8c8ef68c4db3d4d31432199f2b8fa45c44aa323bce91b1daa60bfcaf87", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4d2c0f8c8ef68c4db3d4d31432199f2b8fa45c44aa323bce91b1daa60bfcaf87", kill_on_drop: false }` [INFO] [stdout] 4d2c0f8c8ef68c4db3d4d31432199f2b8fa45c44aa323bce91b1daa60bfcaf87 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] ff7160ca9fd5fd2901074669af549111f6503e527a7f726d001167696f8d7d84 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ff7160ca9fd5fd2901074669af549111f6503e527a7f726d001167696f8d7d84", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.18s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rumi_lib-89d55b8ff91d2e12 [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test test::test_read_groups_cigars ... ok [INFO] [stdout] test test::test_determine_umi ... ok [INFO] [stdout] test test::test_graph_small ... ok [INFO] [stdout] test test::test_group_reads_complex ... ok [INFO] [stdout] test test::test_group_reads_small ... ok [INFO] [stdout] test test::test_graph_umi ... ok [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rumi-18ca2d223b31bc9f [INFO] [stdout] test test::test_read_groups_umi_tools ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests rumi_lib [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "ff7160ca9fd5fd2901074669af549111f6503e527a7f726d001167696f8d7d84", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ff7160ca9fd5fd2901074669af549111f6503e527a7f726d001167696f8d7d84", kill_on_drop: false }` [INFO] [stdout] ff7160ca9fd5fd2901074669af549111f6503e527a7f726d001167696f8d7d84