[INFO] crate neuro 0.1.0 is already in cache [INFO] testing neuro-0.1.0 against beta-2020-07-24 for beta-1.46-1 [INFO] extracting crate neuro 0.1.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate neuro 0.1.0 on toolchain beta-2020-07-24 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate neuro 0.1.0 [INFO] finished tweaking crates.io crate neuro 0.1.0 [INFO] tweaked toml for crates.io crate neuro 0.1.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate crates.io crate neuro 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 1087b549c61764f2da5d5d3769bc0a688e5eb5e5a5e0b994df312439a3b61d76 [INFO] running `Command { std: "docker" "start" "-a" "1087b549c61764f2da5d5d3769bc0a688e5eb5e5a5e0b994df312439a3b61d76", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1087b549c61764f2da5d5d3769bc0a688e5eb5e5a5e0b994df312439a3b61d76", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1087b549c61764f2da5d5d3769bc0a688e5eb5e5a5e0b994df312439a3b61d76", kill_on_drop: false }` [INFO] [stdout] 1087b549c61764f2da5d5d3769bc0a688e5eb5e5a5e0b994df312439a3b61d76 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4382f63171a338b5545c796d928ee7d321ba51d6ec752432a69287b92523cda4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4382f63171a338b5545c796d928ee7d321ba51d6ec752432a69287b92523cda4", kill_on_drop: false }` [INFO] [stderr] Compiling ascii v0.9.3 [INFO] [stderr] Compiling num-rational v0.2.3 [INFO] [stderr] Compiling lock_api v0.2.0 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Compiling clicolors-control v1.0.1 [INFO] [stderr] Compiling regex-automata v0.1.8 [INFO] [stderr] Compiling termios v0.3.1 [INFO] [stderr] Compiling tiff v0.4.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling serde_json v1.0.48 [INFO] [stderr] Compiling png v0.15.3 [INFO] [stderr] Compiling hdf5-derive v0.6.0 [INFO] [stderr] Compiling hdf5-sys v0.6.0 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling console v0.9.2 [INFO] [stderr] Compiling bstr v0.2.11 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling hdf5-types v0.6.0 [INFO] [stderr] Compiling indicatif v0.14.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-497fe8db93002a0d/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55f2d67dc715 - backtrace::backtrace::libunwind::trace::h5e2646fa3eddf2ea [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x55f2d67dc715 - backtrace::backtrace::trace_unsynchronized::hb95dd7f77ce47877 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55f2d67dc715 - std::sys_common::backtrace::_print_fmt::h5e71b67af43fd70d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x55f2d67dc715 - ::fmt::hdb4a83d2b61107e5 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x55f2d680008c - core::fmt::write::ha20e7262fa3e8a7a [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x55f2d67d9432 - std::io::Write::write_fmt::h1aebfe8a5a79e36d [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x55f2d67dec30 - std::sys_common::backtrace::_print::h9c07314cc66ba539 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x55f2d67dec30 - std::sys_common::backtrace::print::hd1fd65f49a2d8544 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x55f2d67dec30 - std::panicking::default_hook::{{closure}}::h222da46485ab36fc [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x55f2d67de97c - std::panicking::default_hook::hc5868949d129ed00 [INFO] [stderr] at src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x55f2d67df273 - std::panicking::rust_panic_with_hook::h26a6ab8b0993c0c8 [INFO] [stderr] at src/libstd/panicking.rs:526 [INFO] [stderr] 11: 0x55f2d65fb809 - std::panicking::begin_panic::ha1a7682d3597fda8 [INFO] [stderr] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:456 [INFO] [stderr] 12: 0x55f2d65c04fc - build_script_build::LibrarySearcher::try_locate_hdf5_library::h2fd6ceb26ac5dd4d [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527 [INFO] [stderr] 13: 0x55f2d65c18ac - build_script_build::main::h3505247ba8412383 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:605 [INFO] [stderr] 14: 0x55f2d65c71fb - std::rt::lang_start::{{closure}}::hb3f5e282c0948c9b [INFO] [stderr] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55f2d67df643 - std::rt::lang_start_internal::{{closure}}::h84a998219831fa70 [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55f2d67df643 - std::panicking::try::do_call::he8e1d689a3e26def [INFO] [stderr] at src/libstd/panicking.rs:348 [INFO] [stderr] 17: 0x55f2d67df643 - std::panicking::try::h264b6eebc2fa7bbf [INFO] [stderr] at src/libstd/panicking.rs:325 [INFO] [stderr] 18: 0x55f2d67df643 - std::panic::catch_unwind::hbf28fafa723b2128 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x55f2d67df643 - std::rt::lang_start_internal::he959aa59bc3ec202 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x55f2d65c71d7 - std::rt::lang_start::hcc2fa49fe40ba9d7 [INFO] [stderr] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55f2d65c23da - main [INFO] [stderr] 22: 0x7fdfa18ba0b3 - __libc_start_main [INFO] [stderr] 23: 0x55f2d65bc1ae - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "4382f63171a338b5545c796d928ee7d321ba51d6ec752432a69287b92523cda4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4382f63171a338b5545c796d928ee7d321ba51d6ec752432a69287b92523cda4", kill_on_drop: false }` [INFO] [stdout] 4382f63171a338b5545c796d928ee7d321ba51d6ec752432a69287b92523cda4