[INFO] crate checkm 0.0.1 is already in cache
[INFO] testing checkm-0.0.1 against beta-2020-07-24 for beta-1.46-1
[INFO] extracting crate checkm 0.0.1 into /workspace/builds/worker-9/source
[INFO] validating manifest of crates.io crate checkm 0.0.1 on toolchain beta-2020-07-24
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate checkm 0.0.1
[INFO] finished tweaking crates.io crate checkm 0.0.1
[INFO] tweaked toml for crates.io crate checkm 0.0.1 written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 6c1592ff19fc85b6db11b3a1a6f9cad8fde65f6ef8bb7f2f161b4c2b59c02e5b
[INFO] running `Command { std: "docker" "start" "-a" "6c1592ff19fc85b6db11b3a1a6f9cad8fde65f6ef8bb7f2f161b4c2b59c02e5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6c1592ff19fc85b6db11b3a1a6f9cad8fde65f6ef8bb7f2f161b4c2b59c02e5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6c1592ff19fc85b6db11b3a1a6f9cad8fde65f6ef8bb7f2f161b4c2b59c02e5b", kill_on_drop: false }`
[INFO] [stdout] 6c1592ff19fc85b6db11b3a1a6f9cad8fde65f6ef8bb7f2f161b4c2b59c02e5b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] cc5c017bc4747df231ab8dab4f1aa081f797a8b82cce6372da041986ee6ff33e
[INFO] running `Command { std: "docker" "start" "-a" "cc5c017bc4747df231ab8dab4f1aa081f797a8b82cce6372da041986ee6ff33e", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling libc v0.2.74
[INFO] [stderr]    Compiling serde v1.0.114
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling regex-syntax v0.6.18
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling itoa v0.4.6
[INFO] [stderr]    Compiling termcolor v1.1.0
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling aho-corasick v0.7.13
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling regex-automata v0.1.9
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling bstr v0.2.13
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling checkm v0.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 29.52s
[INFO] running `Command { std: "docker" "inspect" "cc5c017bc4747df231ab8dab4f1aa081f797a8b82cce6372da041986ee6ff33e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cc5c017bc4747df231ab8dab4f1aa081f797a8b82cce6372da041986ee6ff33e", kill_on_drop: false }`
[INFO] [stdout] cc5c017bc4747df231ab8dab4f1aa081f797a8b82cce6372da041986ee6ff33e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 68808533f7618377c8d329851806175c64de245b88f0cd6baad5f45f0b842a34
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "68808533f7618377c8d329851806175c64de245b88f0cd6baad5f45f0b842a34", kill_on_drop: false }`
[INFO] [stderr]    Compiling checkm v0.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 3.06s
[INFO] running `Command { std: "docker" "inspect" "68808533f7618377c8d329851806175c64de245b88f0cd6baad5f45f0b842a34", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "68808533f7618377c8d329851806175c64de245b88f0cd6baad5f45f0b842a34", kill_on_drop: false }`
[INFO] [stdout] 68808533f7618377c8d329851806175c64de245b88f0cd6baad5f45f0b842a34
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 930dde697139673e446f963819f7052e47c0002168c4ec77e67a59e9562faf60
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "930dde697139673e446f963819f7052e47c0002168c4ec77e67a59e9562faf60", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.11s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/checkm-1730908c4d619cea
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test test::test_ordering_4times ... ok
[INFO] [stdout] test test::test_ordering_5times ... ok
[INFO] [stdout] test test::test_fasta_ordering_4times ... ok
[INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok
[INFO] [stdout] test test::test_good_quality_genome_names ... ok
[INFO] [stdout] test test::test_retrieve ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests checkm
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "930dde697139673e446f963819f7052e47c0002168c4ec77e67a59e9562faf60", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "930dde697139673e446f963819f7052e47c0002168c4ec77e67a59e9562faf60", kill_on_drop: false }`
[INFO] [stdout] 930dde697139673e446f963819f7052e47c0002168c4ec77e67a59e9562faf60