[INFO] crate bio 0.31.0 is already in cache [INFO] testing bio-0.31.0 against beta-2020-07-24 for beta-1.46-1 [INFO] extracting crate bio 0.31.0 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate bio 0.31.0 on toolchain beta-2020-07-24 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate bio 0.31.0 [INFO] finished tweaking crates.io crate bio 0.31.0 [INFO] tweaked toml for crates.io crate bio 0.31.0 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 715984be25048f2cf9f4a382f2683df4dd955513f88369ac974c470fa5c79ec4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "715984be25048f2cf9f4a382f2683df4dd955513f88369ac974c470fa5c79ec4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "715984be25048f2cf9f4a382f2683df4dd955513f88369ac974c470fa5c79ec4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "715984be25048f2cf9f4a382f2683df4dd955513f88369ac974c470fa5c79ec4", kill_on_drop: false }` [INFO] [stdout] 715984be25048f2cf9f4a382f2683df4dd955513f88369ac974c470fa5c79ec4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ad6a4ccf73d965978d72eb8455180709c6f218ef1b879b782c83da31272ec566 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ad6a4ccf73d965978d72eb8455180709c6f218ef1b879b782c83da31272ec566", kill_on_drop: false }` [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling bio v0.31.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling strum v0.18.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling statrs v0.12.0 [INFO] [stderr] Compiling ordered-float v1.1.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.8 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling snafu v0.6.8 [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 33.33s [INFO] running `Command { std: "docker" "inspect" "ad6a4ccf73d965978d72eb8455180709c6f218ef1b879b782c83da31272ec566", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ad6a4ccf73d965978d72eb8455180709c6f218ef1b879b782c83da31272ec566", kill_on_drop: false }` [INFO] [stdout] ad6a4ccf73d965978d72eb8455180709c6f218ef1b879b782c83da31272ec566 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6ffe6becf52fb029cb5a4f0af37516e2923014ba0e5a82f148d4dace0b34b253 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6ffe6becf52fb029cb5a4f0af37516e2923014ba0e5a82f148d4dace0b34b253", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proptest v0.9.6 [INFO] [stderr] Compiling bio v0.31.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 42.70s [INFO] running `Command { std: "docker" "inspect" "6ffe6becf52fb029cb5a4f0af37516e2923014ba0e5a82f148d4dace0b34b253", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6ffe6becf52fb029cb5a4f0af37516e2923014ba0e5a82f148d4dace0b34b253", kill_on_drop: false }` [INFO] [stdout] 6ffe6becf52fb029cb5a4f0af37516e2923014ba0e5a82f148d4dace0b34b253 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 01441e730426e5c7cb84da6959351502b815eaf76fd71da781aeb603e937981f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "01441e730426e5c7cb84da6959351502b815eaf76fd71da781aeb603e937981f", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.44s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bio-77dfb36ff97cafd9 [INFO] [stdout] [INFO] [stdout] running 319 tests [INFO] [stdout] test alignment::distance::tests::test_levenshtein_dist ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_band_add_entry ... ok [INFO] [stdout] test alignment::distance::tests::test_hamming_dist_good ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_band_add_kmer ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_blosum62 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_global ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_aligner_new ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_deletions_ouside_band ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_global_affine_ins ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_global_affine_ins2 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_insert_only_semiglobal ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_global_right_del ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_insert_in_between_semiglobal ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_insertion_after_clip ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_issue11 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_insertion_ouside_band ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_issue12_3 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_issue12_1 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_left_aligned_ins ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_left_aligned_del ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_issue12_2 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_local_affine_ins2 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_local ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_longer_string_all_operations ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_local_empty ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_only_clips ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_band_starts_inside ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_semiglobal_gap_open_lt_mismatch ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_deletion ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_semiglobal ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_insertion ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_band_ends_inside ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_semiglobal_simple ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_xclip_suffix_custom ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_xclip_prefix_custom ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_zero_score_clips ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_prefix_custom ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_suffix_custom ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs3 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs2 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_traceback_outside_band ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_prefix_only ... ok [INFO] [stdout] test alignment::pairwise::tests::test_global ... ok [INFO] [stdout] test alignment::pairwise::tests::test_blosum62 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs4 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs1 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_yclip_suffix_only ... ok [INFO] [stdout] test alignment::pairwise::tests::test_global_affine_ins ... ok [INFO] [stdout] test alignment::pairwise::tests::test_aligner_new ... ok [INFO] [stdout] test alignment::pairwise::tests::test_global_affine_ins2 ... ok [INFO] [stdout] test alignment::pairwise::tests::test_insert_only_semiglobal ... ok [INFO] [stdout] test alignment::pairwise::tests::test_issue12_1 ... ok [INFO] [stdout] test alignment::pairwise::tests::test_issue11 ... ok [INFO] [stdout] test alignment::pairwise::tests::test_insert_in_between_semiglobal ... ok [INFO] [stdout] test alignment::pairwise::tests::test_global_right_del ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_overhangs5 ... ok [INFO] [stdout] test alignment::pairwise::tests::test_left_aligned_ins ... ok [INFO] [stdout] test alignment::pairwise::tests::test_issue12_2 ... ok [INFO] [stdout] test alignment::pairwise::tests::test_longer_string_all_operations ... ok [INFO] [stdout] test alignment::pairwise::tests::test_local ... ok [INFO] [stdout] test alignment::pairwise::tests::test_left_aligned_del ... ok [INFO] [stdout] test alignment::pairwise::tests::test_only_clips ... ok [INFO] [stdout] test alignment::pairwise::tests::test_issue12_3 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_band_is_fully_inside ... ok [INFO] [stdout] test alignment::pairwise::tests::test_local_affine_ins2 ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_substitutions ... ok [INFO] [stdout] test alignment::pairwise::tests::test_scoring_from_scores ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_same ... ok [INFO] [stdout] test alignment::pairwise::tests::test_semiglobal_simple ... ok [INFO] [stdout] test alignment::pairwise::tests::test_yclip_prefix_custom ... ok [INFO] [stdout] test alignment::pairwise::tests::test_semiglobal_gap_open_lt_mismatch ... ok [INFO] [stdout] test alignment::pairwise::tests::test_xclip_prefix_custom ... ok [INFO] [stdout] test alignment::pairwise::tests::test_xclip_suffix_custom ... ok [INFO] [stdout] test alignment::pairwise::tests::test_zero_score_clips ... ok [INFO] [stdout] test alignment::pairwise::tests::test_yclip_suffix_custom ... ok [INFO] [stdout] test alignment::pairwise::tests::traceback_cell ... ok [INFO] [stdout] test alignment::pairwise::tests::test_semiglobal ... ok [INFO] [stdout] test alignment::poa::tests::test_branched_alignment ... ok [INFO] [stdout] test alignment::poa::tests::test_init_graph ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp_same ... ok [INFO] [stdout] test alignment::poa::tests::test_alignment ... ok [INFO] [stdout] test alignment::poa::tests::test_alt_branched_alignment ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp0 ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_find_kmer_matches ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp2 ... ok [INFO] [stdout] test alignment::poa::tests::test_insertion_on_branch ... ok [INFO] [stdout] test alignment::poa::tests::test_poa_method_chaining ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_expanded_matches ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdp ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdp1 ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdpkpp_tandem_repeat ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdpkpp_same ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp1 ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_lcskpp_tandem_repeat ... ok [INFO] [stdout] test data_structures::bit_tree::test_bit_tree::test_bit_tree ... ok [INFO] [stdout] test alphabets::protein::tests::is_word ... ok [INFO] [stdout] test alphabets::protein::tests::is_no_word ... ok [INFO] [stdout] test alphabets::rna::tests::is_word ... ok [INFO] [stdout] test alphabets::rna::tests::symbol_is_no_word ... ok [INFO] [stdout] test alignment::sparse::sparse_alignment::test_sdp2 ... ok [INFO] [stdout] test alphabets::rna::tests::test_reverse_complement ... ok [INFO] [stdout] test alphabets::rna::tests::number_is_no_word ... ok [INFO] [stdout] test alphabets::rna::tests::is_no_word ... ok [INFO] [stdout] test data_structures::bwt::tests::test_occ ... ok [INFO] [stdout] test data_structures::fmindex::tests::test_fmindex ... ok [INFO] [stdout] test data_structures::annot_map::tests::lookup ... ok [INFO] [stdout] test alphabets::protein::tests::symbol_is_no_word ... ok [INFO] [stdout] test alphabets::protein::tests::number_is_no_word ... ok [INFO] [stdout] test data_structures::fmindex::tests::test_fmindex_not_found ... ok [INFO] [stdout] test data_structures::bwt::tests::test_bwtfind ... ok [INFO] [stdout] test data_structures::fmindex::tests::test_init_interval ... ok [INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::iter_mut ... ok [INFO] [stdout] test data_structures::bwt::tests::test_invert_bwt ... ok [INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::test_insertion_and_intersection ... ok [INFO] [stdout] test data_structures::annot_map::tests::overlaps ... ok [INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::from_iterator ... ok [INFO] [stdout] test data_structures::fmindex::tests::test_smems ... ok [INFO] [stdout] test data_structures::bitenc::tests::test_push_values ... ok [INFO] [stdout] test data_structures::bitenc::tests::test_bitenc ... ok [INFO] [stdout] test data_structures::interval_tree::array_backed_interval_tree::tests::test_example ... ok [INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::zero_width_ranges ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_rank_select2 ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_select ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_rank_select ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_select_end ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_rank_k ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_single_select ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_issue10_1 ... ok [INFO] [stdout] test data_structures::rank_select::tests::test_select_start ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_buckets ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_lms_pos ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_handles_sentinels_properly ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_issue10_2 ... ok [INFO] [stdout] test data_structures::qgram_index::tests::test_exact_matches_self ... ok [INFO] [stdout] test data_structures::qgram_index::tests::test_matches ... ok [INFO] [stdout] test data_structures::qgram_index::tests::test_qgram_matches ... ok [INFO] [stdout] test data_structures::qgram_index::tests::test_exact_matches ... ok [INFO] [stdout] test io::fasta::tests::test_display_record_no_desc_id_without_space_after ... ok [INFO] [stdout] test io::bed::tests::spliced_to_bed ... ok [INFO] [stdout] test io::fasta::tests::test_display_record_with_desc_id_has_space_between_id_and_desc ... ok [INFO] [stdout] test io::fasta::tests::test_faread_trait ... ok [INFO] [stdout] test io::bed::tests::test_reader ... ok [INFO] [stdout] test io::bed::tests::test_writer ... ok [INFO] [stdout] test io::fasta::tests::test_index_record_fetch_by_rid_second_index_returns_second_record ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_pos_types ... ok [INFO] [stdout] test io::fasta::tests::test_index_sequences ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_pos ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_by_rid_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_all ... ok [INFO] [stdout] test io::fasta::tests::test_index_record_idx_by_rid_invalid_index_returns_error ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_bad_reader ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_by_rid_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_crlf ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_crlf_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_crlf_by_rid_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_read_fails ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_crlf_by_rid_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_no_trailing_lf ... ok [INFO] [stdout] test data_structures::suffix_array::tests::test_sorts_lexically ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_crlf_all ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_seek_fails ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_no_fetch_read_fails ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_size_hint ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter_crlf ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_reused_buffer ... ok [INFO] [stdout] test io::fasta::tests::test_reader_read_fails ... ok [INFO] [stdout] test io::fasta::tests::test_reader_wrong_header ... ok [INFO] [stdout] test io::fasta::tests::test_reader_read_fails_iter ... ok [INFO] [stdout] test io::fasta::tests::test_reader_non_ascii_sequence ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_read_seek_fails ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_read_read_fails ... ok [INFO] [stdout] test io::fasta::tests::test_record_with_attrs_with_description ... ok [INFO] [stdout] test io::fasta::tests::test_reader ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_no_fetch_read_iter_fails ... ok [INFO] [stdout] test io::fasta::tests::test_indexed_reader_iter ... ok [INFO] [stdout] test io::fasta::tests::test_reader_no_id ... ok [INFO] [stdout] test io::fasta::tests::test_writer ... ok [INFO] [stdout] test io::fasta::tests::test_record_with_attrs_without_description ... ok [INFO] [stdout] test io::fastq::tests::test_check_record_quality_and_seq_diff_len_raises_err ... ok [INFO] [stdout] test io::fastq::tests::test_check_record_quality_is_not_ascii_raises_err ... ok [INFO] [stdout] test io::fastq::tests::test_check_record_seq_is_not_ascii_raises_err ... ok [INFO] [stdout] test io::fastq::tests::test_check_valid_record ... ok [INFO] [stdout] test io::fasta::tests::test_writer_to_file_dir_exists_returns_ok ... ok [INFO] [stdout] test io::fastq::tests::test_display_record_no_desc_id_without_space_after ... ok [INFO] [stdout] test io::fastq::tests::test_check_record_id_is_empty_raises_err ... ok [INFO] [stdout] test io::fastq::tests::test_display_record_with_desc_id_has_space_between_id_and_desc ... ok [INFO] [stdout] test io::fastq::tests::test_fqread_trait ... ok [INFO] [stdout] test io::fastq::tests::test_reader ... ok [INFO] [stdout] test io::fasta::tests::test_writer_to_file_dir_doesnt_exist_returns_err ... ok [INFO] [stdout] test io::fastq::tests::test_reader_from_file_path_doesnt_exist_returns_err ... ok [INFO] [stdout] test io::fastq::tests::test_read_sequence_and_quality_are_wrapped_is_handled_with_three_sequences ... ok [INFO] [stdout] test io::fastq::tests::test_read_quality_is_empty_raises_err ... ok [INFO] [stdout] test io::fastq::tests::test_read_sequence_and_quality_are_wrapped_is_handled_with_one_sequence ... ok [INFO] [stdout] test io::fastq::tests::test_read_header_does_not_start_with_correct_char_raises_err ... ok [INFO] [stdout] test io::fastq::tests::test_read_wrapped_record_with_inconsistent_wrapping_errors ... ok [INFO] [stdout] test io::fastq::tests::test_reader_from_file_path_exists_returns_ok ... ok [INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_qual_idx_in_range ... ok [INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_idx_in_range ... ok [INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_len ... ok [INFO] [stdout] test io::fastq::tests::test_record_with_attrs ... ok [INFO] [stdout] test io::fastq::tests::test_record_iterator_next_read_returns_err_causes_next_to_return_some_err ... ok [INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_name ... ok [INFO] [stdout] test io::fastq::tests::test_writer_to_file_dir_exists_returns_ok ... ok [INFO] [stdout] test data_structures::bitenc::tests::test_issue29 ... ok [INFO] [stdout] test io::fastq::tests::test_writer ... ok [INFO] [stdout] test io::fastq::tests::test_writer_to_file_dir_doesnt_exist_returns_err ... ok [INFO] [stdout] test data_structures::interval_tree::avl_interval_tree::tests::test_insertion_and_intersection_2 ... ok [INFO] [stdout] test io::gff::tests::test_convert_gtf2_to_gff3 ... ok [INFO] [stdout] test io::gff::tests::test_writer_gtf2 ... ok [INFO] [stdout] test io::gff::tests::test_writer_gff3 ... ok [INFO] [stdout] test pattern_matching::bom::tests::test_delta ... ok [INFO] [stdout] test io::gff::tests::test_reader_gtf2 ... ok [INFO] [stdout] test pattern_matching::bndm::tests::test_find_all ... ok [INFO] [stdout] test pattern_matching::horspool::tests::test_find_all ... ok [INFO] [stdout] test pattern_matching::bom::tests::test_find_all ... ok [INFO] [stdout] test pattern_matching::kmp::tests::test_delta ... ok [INFO] [stdout] test pattern_matching::kmp::tests::test_find_all_at_start ... ok [INFO] [stdout] test pattern_matching::kmp::tests::test_find_all ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_ambig ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_alignment ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_full_position ... ok [INFO] [stdout] test pattern_matching::horspool::tests::test_shift ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_distance ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_find_all_end ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_long_shorter ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_longest_possible ... ok [INFO] [stdout] test pattern_matching::kmp::tests::test_lps ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_large_dist ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_path_at ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_shorter ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_traceback_path ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_alignment ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_position_cmp ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_full_position ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_find_all_end ... ok [INFO] [stdout] test pattern_matching::myers::long::tests::test_traceback_path2 ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_long_shorter ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_large_dist ... ok [INFO] [stdout] test io::gff::tests::test_reader_gtf2_dup_attr_keys ... ok [INFO] [stdout] test io::gff::tests::test_reader_gff3 ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_ambig ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_distance ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_traceback_path ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_longest_possible ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_path_at ... ok [INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::find_motif ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_position_cmp ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_shorter ... ok [INFO] [stdout] test alignment::pairwise::banded::banded::test_big ... ok [INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::test_info_content ... ok [INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::test_inconsist_err ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_traceback_path2 ... ok [INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::test_mono_err ... ok [INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_info_content ... ok [INFO] [stdout] test io::gff::tests::test_reader_gtf2_2 ... ok [INFO] [stdout] test pattern_matching::pssm::dnamotif::tests::simple_pssm ... ok [INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_inconsist_err ... ok [INFO] [stdout] test pattern_matching::ukkonen::tests::test_find_all_end ... ok [INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_mono_err ... ok [INFO] [stdout] test pattern_matching::shift_and::tests::test_find_all ... ok [INFO] [stdout] test pattern_matching::pssm::protmotif::tests::test_scoring ... ok [INFO] [stdout] test scores::pam250::tests::test_pam250 ... ok [INFO] [stdout] test scores::blosum62::tests::test_blosum62 ... ok [INFO] [stdout] test seq_analysis::gc::tests::test_gc_content ... ok [INFO] [stdout] test seq_analysis::orf::tests::test_one_orf_no_offset ... ok [INFO] [stdout] test seq_analysis::orf::tests::test_one_orf_with_offset ... ok [INFO] [stdout] test pattern_matching::ukkonen::tests::test_find_start ... ok [INFO] [stdout] test scores::pam40::tests::test_pam40 ... ok [INFO] [stdout] test scores::pam120::tests::test_pam120 ... ok [INFO] [stdout] test stats::combinatorics::tests::test_comb_scaled ... ok [INFO] [stdout] test seq_analysis::orf::tests::test_no_orf ... ok [INFO] [stdout] test stats::bayesian::bayes_factors::tests::test_bayes_factor ... ok [INFO] [stdout] test stats::hmm::tests::test_discrete_backward_toy_example ... ok [INFO] [stdout] test seq_analysis::orf::tests::test_two_orfs_different_offsets ... ok [INFO] [stdout] test stats::bayesian::tests::test_expected_fdr ... ok [INFO] [stdout] test stats::combinatorics::tests::test_comb ... ok [INFO] [stdout] test scores::pam200::tests::test_pam200 ... ok [INFO] [stdout] test stats::hmm::tests::test_gaussian_forward_equals_backward_simple_example ... ok [INFO] [stdout] test stats::hmm::tests::test_discrete_viterbi_toy_example ... ok [INFO] [stdout] test stats::hmm::tests::test_gaussian_viterbi_simple_example ... ok [INFO] [stdout] test stats::pairhmm::tests::test_gap_x ... ok [INFO] [stdout] test stats::hmm::tests::test_discrete_forward_toy_example ... ok [INFO] [stdout] test stats::hmm::tests::test_gaussian_backward_simple_example ... ok [INFO] [stdout] test stats::hmm::tests::test_gaussian_forward_simple_example ... ok [INFO] [stdout] test stats::pairhmm::tests::test_gap_y ... ok [INFO] [stdout] test stats::pairhmm::tests::test_interleave_gaps ... ok [INFO] [stdout] test stats::probs::tests::test_cap_numerical_overshoot ... ok [INFO] [stdout] test stats::pairhmm::tests::test_same ... ok [INFO] [stdout] test stats::probs::tests::test_empty_sum ... ok [INFO] [stdout] test stats::probs::cdf::test::test_cdf ... ok [INFO] [stdout] test stats::probs::tests::test_one_minus ... ok [INFO] [stdout] test stats::probs::tests::test_sub ... ok [INFO] [stdout] test stats::probs::tests::test_simpsons_integrate ... ok [INFO] [stdout] test stats::probs::tests::test_sum ... ok [INFO] [stdout] test stats::probs::tests::test_sum_one_zero ... ok [INFO] [stdout] test stats::probs::tests::test_trapezoidal_integrate ... ok [INFO] [stdout] test utils::fastexp::tests::test_fastexp ... ok [INFO] [stdout] test stats::probs::tests::test_zero ... ok [INFO] [stdout] test utils::interval::tests::range_interval_conversions ... ok [INFO] [stdout] test stats::pairhmm::tests::test_mismatch ... ok [INFO] [stdout] test stats::probs::tests::test_cumsum ... ok [INFO] [stdout] test stats::pairhmm::tests::test_banded ... ok [INFO] [stdout] test utils::text::tests::test_print_sequence ... ok [INFO] [stdout] test utils::tests::test_scan ... ok [INFO] [stdout] test utils::tests::test_prescan ... ok [INFO] [stdout] test data_structures::fmindex::tests::test_issue39 ... ok [INFO] [stdout] test data_structures::interpolation_table::tests::test_interpolation_table ... ok [INFO] [stdout] test alignment::distance::tests::test_hamming_dist_bad ... ok [INFO] [stdout] test io::fasta::tests::test_write_record ... FAILED [INFO] [stdout] test io::fastq::tests::test_write_record ... FAILED [INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_qual_idx_out_of_range ... ok [INFO] [stdout] test stats::hmm::tests::test_discrete_forward_equals_backward_toy_example ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_pattern_too_long ... ok [INFO] [stdout] test io::fastq::tests::test_sequence_read_for_record_trait_method_base_idx_out_of_range ... ok [INFO] [stdout] test pattern_matching::myers::tests::test_pattern_too_long_builder ... ok [INFO] [stdout] test stats::probs::tests::test_cap_numerical_overshoot_panic ... ok [INFO] [stdout] test utils::interval::tests::negative_width_range ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- io::fasta::tests::test_write_record stdout ---- [INFO] [stdout] thread 'io::fasta::tests::test_write_record' panicked at 'called `Result::unwrap()` on an `Err` value: Os { code: 30, kind: Other, message: "Read-only file system" }', src/io/fasta.rs:1478:43 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x563b21420c85 - backtrace::backtrace::libunwind::trace::h5e2646fa3eddf2ea [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x563b21420c85 - backtrace::backtrace::trace_unsynchronized::hb95dd7f77ce47877 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x563b21420c85 - std::sys_common::backtrace::_print_fmt::h5e71b67af43fd70d [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x563b21420c85 - ::fmt::hdb4a83d2b61107e5 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x563b2144b87c - core::fmt::write::ha20e7262fa3e8a7a [INFO] [stdout] at src/libcore/fmt/mod.rs:1076 [INFO] [stdout] 5: 0x563b211a6985 - std::io::Write::write_fmt::hd8ff364c7845d2d0 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/io/mod.rs:1537 [INFO] [stdout] 6: 0x563b2141b151 - std::io::impls::>::write_fmt::h1c057ef6e8762996 [INFO] [stdout] at src/libstd/io/impls.rs:176 [INFO] [stdout] 7: 0x563b214233e0 - std::sys_common::backtrace::_print::h9c07314cc66ba539 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x563b214233e0 - std::sys_common::backtrace::print::hd1fd65f49a2d8544 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x563b214233e0 - std::panicking::default_hook::{{closure}}::h222da46485ab36fc [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x563b214230da - std::panicking::default_hook::hc5868949d129ed00 [INFO] [stdout] at src/libstd/panicking.rs:214 [INFO] [stdout] 11: 0x563b21423a23 - std::panicking::rust_panic_with_hook::h26a6ab8b0993c0c8 [INFO] [stdout] at src/libstd/panicking.rs:526 [INFO] [stdout] 12: 0x563b2142361b - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:437 [INFO] [stdout] 13: 0x563b21449531 - core::panicking::panic_fmt::h17139c2000299725 [INFO] [stdout] at src/libcore/panicking.rs:85 [INFO] [stdout] 14: 0x563b21449353 - core::option::expect_none_failed::h972f96abb4ec8952 [INFO] [stdout] at src/libcore/option.rs:1269 [INFO] [stdout] 15: 0x563b20f0ae3b - core::result::Result::unwrap::hfcb1db7e2833ff3c [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libcore/result.rs:1005 [INFO] [stdout] 16: 0x563b21002f14 - bio::io::fasta::tests::test_write_record::h28bfae8eaf7460de [INFO] [stdout] at src/io/fasta.rs:1478 [INFO] [stdout] 17: 0x563b21002e8a - bio::io::fasta::tests::test_write_record::{{closure}}::h15722c2851a8487a [INFO] [stdout] at src/io/fasta.rs:1476 [INFO] [stdout] 18: 0x563b210852be - core::ops::function::FnOnce::call_once::h438f1d2f7f5fadde [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libcore/ops/function.rs:233 [INFO] [stdout] 19: 0x563b211cdefc - as core::ops::function::FnOnce>::call_once::h42148c33ed88c979 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/liballoc/boxed.rs:1081 [INFO] [stdout] 20: 0x563b211cdefc - as core::ops::function::FnOnce<()>>::call_once::h759dc0b09d774665 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:318 [INFO] [stdout] 21: 0x563b211cdefc - std::panicking::try::do_call::h676ad1fc9e9badea [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:348 [INFO] [stdout] 22: 0x563b211cdefc - std::panicking::try::hee36a8727a3050b0 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:325 [INFO] [stdout] 23: 0x563b211cdefc - std::panic::catch_unwind::hd5d426ebd89b2542 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:394 [INFO] [stdout] 24: 0x563b211cdefc - test::run_test_in_process::h8dacdba4dc4cbaa5 [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 25: 0x563b211cdefc - test::run_test::run_test_inner::{{closure}}::hf93754afad6be40f [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 26: 0x563b211a5e76 - std::sys_common::backtrace::__rust_begin_short_backtrace::h2c69fab544a90730 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 27: 0x563b211aaf05 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hcf302fafa60d80f2 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/thread/mod.rs:475 [INFO] [stdout] 28: 0x563b211aaf05 - as core::ops::function::FnOnce<()>>::call_once::h39ede710608e817e [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:318 [INFO] [stdout] 29: 0x563b211aaf05 - std::panicking::try::do_call::hec0b4d2faa46fbf7 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:348 [INFO] [stdout] 30: 0x563b211aaf05 - std::panicking::try::h0144ba3f2539803d [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:325 [INFO] [stdout] 31: 0x563b211aaf05 - std::panic::catch_unwind::ha03e59eb589f857b [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:394 [INFO] [stdout] 32: 0x563b211aaf05 - std::thread::Builder::spawn_unchecked::{{closure}}::hdeba34620a4a7a44 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/thread/mod.rs:474 [INFO] [stdout] 33: 0x563b211aaf05 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h552693dbb801eadd [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libcore/ops/function.rs:233 [INFO] [stdout] 34: 0x563b2142a3fa - as core::ops::function::FnOnce>::call_once::h61c24496ae624ac5 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/liballoc/boxed.rs:1081 [INFO] [stdout] 35: 0x563b2142a3fa - as core::ops::function::FnOnce>::call_once::h89548957afa14049 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/liballoc/boxed.rs:1081 [INFO] [stdout] 36: 0x563b2142a3fa - std::sys::unix::thread::Thread::new::thread_start::h73903fbbff5b990e [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 37: 0x7fac758b8609 - start_thread [INFO] [stdout] 38: 0x7fac757c4103 - __clone [INFO] [stdout] 39: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- io::fastq::tests::test_write_record stdout ---- [INFO] [stdout] thread 'io::fastq::tests::test_write_record' panicked at 'called `Result::unwrap()` on an `Err` value: Os { code: 30, kind: Other, message: "Read-only file system" }', src/io/fastq.rs:787:43 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x563b21420c85 - backtrace::backtrace::libunwind::trace::h5e2646fa3eddf2ea [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x563b21420c85 - backtrace::backtrace::trace_unsynchronized::hb95dd7f77ce47877 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x563b21420c85 - std::sys_common::backtrace::_print_fmt::h5e71b67af43fd70d [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x563b21420c85 - ::fmt::hdb4a83d2b61107e5 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x563b2144b87c - core::fmt::write::ha20e7262fa3e8a7a [INFO] [stdout] at src/libcore/fmt/mod.rs:1076 [INFO] [stdout] 5: 0x563b211a6985 - std::io::Write::write_fmt::hd8ff364c7845d2d0 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/io/mod.rs:1537 [INFO] [stdout] 6: 0x563b2141b151 - std::io::impls::>::write_fmt::h1c057ef6e8762996 [INFO] [stdout] at src/libstd/io/impls.rs:176 [INFO] [stdout] 7: 0x563b214233e0 - std::sys_common::backtrace::_print::h9c07314cc66ba539 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x563b214233e0 - std::sys_common::backtrace::print::hd1fd65f49a2d8544 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x563b214233e0 - std::panicking::default_hook::{{closure}}::h222da46485ab36fc [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x563b214230da - std::panicking::default_hook::hc5868949d129ed00 [INFO] [stdout] at src/libstd/panicking.rs:214 [INFO] [stdout] 11: 0x563b21423a23 - std::panicking::rust_panic_with_hook::h26a6ab8b0993c0c8 [INFO] [stdout] at src/libstd/panicking.rs:526 [INFO] [stdout] 12: 0x563b2142361b - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:437 [INFO] [stdout] 13: 0x563b21449531 - core::panicking::panic_fmt::h17139c2000299725 [INFO] [stdout] at src/libcore/panicking.rs:85 [INFO] [stdout] 14: 0x563b21449353 - core::option::expect_none_failed::h972f96abb4ec8952 [INFO] [stdout] at src/libcore/option.rs:1269 [INFO] [stdout] 15: 0x563b20f0ae3b - core::result::Result::unwrap::hfcb1db7e2833ff3c [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libcore/result.rs:1005 [INFO] [stdout] 16: 0x563b20f972d0 - bio::io::fastq::tests::test_write_record::haa4dc05006dfa194 [INFO] [stdout] at src/io/fastq.rs:787 [INFO] [stdout] 17: 0x563b20f9723a - bio::io::fastq::tests::test_write_record::{{closure}}::hab37524130fe6f57 [INFO] [stdout] at src/io/fastq.rs:785 [INFO] [stdout] 18: 0x563b2108508e - core::ops::function::FnOnce::call_once::h3adcf058635237d1 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libcore/ops/function.rs:233 [INFO] [stdout] 19: 0x563b211cdefc - as core::ops::function::FnOnce>::call_once::h42148c33ed88c979 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/liballoc/boxed.rs:1081 [INFO] [stdout] 20: 0x563b211cdefc - as core::ops::function::FnOnce<()>>::call_once::h759dc0b09d774665 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:318 [INFO] [stdout] 21: 0x563b211cdefc - std::panicking::try::do_call::h676ad1fc9e9badea [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:348 [INFO] [stdout] 22: 0x563b211cdefc - std::panicking::try::hee36a8727a3050b0 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:325 [INFO] [stdout] 23: 0x563b211cdefc - std::panic::catch_unwind::hd5d426ebd89b2542 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:394 [INFO] [stdout] 24: 0x563b211cdefc - test::run_test_in_process::h8dacdba4dc4cbaa5 [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 25: 0x563b211cdefc - test::run_test::run_test_inner::{{closure}}::hf93754afad6be40f [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 26: 0x563b211a5e76 - std::sys_common::backtrace::__rust_begin_short_backtrace::h2c69fab544a90730 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 27: 0x563b211aaf05 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hcf302fafa60d80f2 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/thread/mod.rs:475 [INFO] [stdout] 28: 0x563b211aaf05 - as core::ops::function::FnOnce<()>>::call_once::h39ede710608e817e [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:318 [INFO] [stdout] 29: 0x563b211aaf05 - std::panicking::try::do_call::hec0b4d2faa46fbf7 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:348 [INFO] [stdout] 30: 0x563b211aaf05 - std::panicking::try::h0144ba3f2539803d [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panicking.rs:325 [INFO] [stdout] 31: 0x563b211aaf05 - std::panic::catch_unwind::ha03e59eb589f857b [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/panic.rs:394 [INFO] [stdout] 32: 0x563b211aaf05 - std::thread::Builder::spawn_unchecked::{{closure}}::hdeba34620a4a7a44 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libstd/thread/mod.rs:474 [INFO] [stdout] 33: 0x563b211aaf05 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h552693dbb801eadd [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/libcore/ops/function.rs:233 [INFO] [stdout] 34: 0x563b2142a3fa - as core::ops::function::FnOnce>::call_once::h61c24496ae624ac5 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/liballoc/boxed.rs:1081 [INFO] [stdout] 35: 0x563b2142a3fa - as core::ops::function::FnOnce>::call_once::h89548957afa14049 [INFO] [stdout] at /rustc/6f959902b3103c49ca981fbc01871589c3498489/src/liballoc/boxed.rs:1081 [INFO] [stdout] 36: 0x563b2142a3fa - std::sys::unix::thread::Thread::new::thread_start::h73903fbbff5b990e [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 37: 0x7fac758b8609 - start_thread [INFO] [stdout] 38: 0x7fac757c4103 - __clone [INFO] [stdout] 39: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] io::fasta::tests::test_write_record [INFO] [stdout] io::fastq::tests::test_write_record [INFO] [stdout] [INFO] [stdout] test result: FAILED. 317 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "01441e730426e5c7cb84da6959351502b815eaf76fd71da781aeb603e937981f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "01441e730426e5c7cb84da6959351502b815eaf76fd71da781aeb603e937981f", kill_on_drop: false }` [INFO] [stdout] 01441e730426e5c7cb84da6959351502b815eaf76fd71da781aeb603e937981f