[INFO] updating cached repository https://github.com/sstadick/rumi
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }`
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 34a92eb41857a1a1c4c096f516a0271ed57d16f4
[INFO] testing sstadick/rumi against beta-2020-07-24 for beta-1.46-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsstadick%2Frumi" "/workspace/builds/worker-12/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/sstadick/rumi on toolchain beta-2020-07-24
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/sstadick/rumi
[INFO] finished tweaking git repo https://github.com/sstadick/rumi
[INFO] tweaked toml for git repo https://github.com/sstadick/rumi written to /workspace/builds/worker-12/source/Cargo.toml
[INFO] crate git repo https://github.com/sstadick/rumi already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+beta-2020-07-24" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] bce8b8d60ba07b6a313bc8757ec6f3cedfa9e56eaf5fe5526088f3060fc68354
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "bce8b8d60ba07b6a313bc8757ec6f3cedfa9e56eaf5fe5526088f3060fc68354", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bce8b8d60ba07b6a313bc8757ec6f3cedfa9e56eaf5fe5526088f3060fc68354", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bce8b8d60ba07b6a313bc8757ec6f3cedfa9e56eaf5fe5526088f3060fc68354", kill_on_drop: false }`
[INFO] [stdout] bce8b8d60ba07b6a313bc8757ec6f3cedfa9e56eaf5fe5526088f3060fc68354
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f2b9903734b1df311f0d1fae312af3648bcc3f202d6e6dafdfc15b9d5a3a64a2
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "f2b9903734b1df311f0d1fae312af3648bcc3f202d6e6dafdfc15b9d5a3a64a2", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v0.15.39
[INFO] [stderr]    Compiling proc-macro2 v1.0.6
[INFO] [stderr]    Compiling bindgen v0.51.1
[INFO] [stderr]    Compiling doc-comment v0.3.1
[INFO] [stderr]    Compiling serde v1.0.97
[INFO] [stderr]    Compiling rayon-core v1.5.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling basebits v1.2.0
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling backtrace-sys v0.1.32
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling clang-sys v0.28.0
[INFO] [stderr]    Compiling log v0.4.7
[INFO] [stderr]    Compiling fs-utils v1.1.1
[INFO] [stderr]    Compiling lzma-sys v0.1.14
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]    Compiling crossbeam-utils v0.6.6
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling which v3.1.0
[INFO] [stderr]    Compiling num_cpus v1.10.1
[INFO] [stderr]    Compiling rustc-hash v1.0.1
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling env_logger v0.6.2
[INFO] [stderr]    Compiling crossbeam-epoch v0.7.2
[INFO] [stderr]    Compiling crossbeam-queue v0.1.2
[INFO] [stderr]    Compiling backtrace v0.3.40
[INFO] [stderr]    Compiling crossbeam-deque v0.6.3
[INFO] [stderr]    Compiling quote v1.0.2
[INFO] [stderr]    Compiling cexpr v0.3.5
[INFO] [stderr]    Compiling rayon v1.1.0
[INFO] [stderr]    Compiling serde_derive v1.0.97
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]    Compiling snafu v0.5.0
[INFO] [stderr]    Compiling rust-htslib v0.26.0
[INFO] [stderr]    Compiling bio-types v0.5.1
[INFO] [stderr]    Compiling rumi v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 02s
[INFO] running `Command { std: "docker" "inspect" "f2b9903734b1df311f0d1fae312af3648bcc3f202d6e6dafdfc15b9d5a3a64a2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f2b9903734b1df311f0d1fae312af3648bcc3f202d6e6dafdfc15b9d5a3a64a2", kill_on_drop: false }`
[INFO] [stdout] f2b9903734b1df311f0d1fae312af3648bcc3f202d6e6dafdfc15b9d5a3a64a2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 78e3111a6556cd53b1fd3c4b2bdb6931b95a7b513c163d16751ec285119c6498
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "78e3111a6556cd53b1fd3c4b2bdb6931b95a7b513c163d16751ec285119c6498", kill_on_drop: false }`
[INFO] [stderr]    Compiling rumi v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 5.04s
[INFO] running `Command { std: "docker" "inspect" "78e3111a6556cd53b1fd3c4b2bdb6931b95a7b513c163d16751ec285119c6498", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "78e3111a6556cd53b1fd3c4b2bdb6931b95a7b513c163d16751ec285119c6498", kill_on_drop: false }`
[INFO] [stdout] 78e3111a6556cd53b1fd3c4b2bdb6931b95a7b513c163d16751ec285119c6498
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-07-24" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 64e552d48bd009f69f32bf793eb658d9c24cf3543cab025f6f447cbdff17126b
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "64e552d48bd009f69f32bf793eb658d9c24cf3543cab025f6f447cbdff17126b", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.15s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/rumi_lib-89d55b8ff91d2e12
[INFO] [stdout] 
[INFO] [stdout] running 7 tests
[INFO] [stdout] test test::test_graph_small ... ok
[INFO] [stdout] test test::test_determine_umi ... ok
[INFO] [stdout] test test::test_graph_umi ... ok
[INFO] [stdout] test test::test_read_groups_cigars ... ok
[INFO] [stdout] test test::test_read_groups_umi_tools ... ok
[INFO] [stdout] test test::test_group_reads_small ... ok
[INFO] [stdout] test test::test_group_reads_complex ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/rumi-18ca2d223b31bc9f
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests rumi_lib
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "64e552d48bd009f69f32bf793eb658d9c24cf3543cab025f6f447cbdff17126b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "64e552d48bd009f69f32bf793eb658d9c24cf3543cab025f6f447cbdff17126b", kill_on_drop: false }`
[INFO] [stdout] 64e552d48bd009f69f32bf793eb658d9c24cf3543cab025f6f447cbdff17126b