[INFO] crate ncbitaxonomy 1.0.7 is already in cache
[INFO] testing ncbitaxonomy-1.0.7 against 1.45.2 for beta-1.46-1
[INFO] extracting crate ncbitaxonomy 1.0.7 into /workspace/builds/worker-6/source
[INFO] validating manifest of crates.io crate ncbitaxonomy 1.0.7 on toolchain 1.45.2
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.45.2" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate ncbitaxonomy 1.0.7
[INFO] finished tweaking crates.io crate ncbitaxonomy 1.0.7
[INFO] tweaked toml for crates.io crate ncbitaxonomy 1.0.7 written to /workspace/builds/worker-6/source/Cargo.toml
[INFO] crate crates.io crate ncbitaxonomy 1.0.7 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.45.2" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] ef80b9414ea6b8ba08b9991a900d1ba5f520f99a7c186b8eae3be7086eb5148d
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "ef80b9414ea6b8ba08b9991a900d1ba5f520f99a7c186b8eae3be7086eb5148d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ef80b9414ea6b8ba08b9991a900d1ba5f520f99a7c186b8eae3be7086eb5148d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ef80b9414ea6b8ba08b9991a900d1ba5f520f99a7c186b8eae3be7086eb5148d", kill_on_drop: false }`
[INFO] [stdout] ef80b9414ea6b8ba08b9991a900d1ba5f520f99a7c186b8eae3be7086eb5148d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1b4a99d64c44222d96702257842e2018094c52a03d774253e2bdcb6b73758c7f
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "1b4a99d64c44222d96702257842e2018094c52a03d774253e2bdcb6b73758c7f", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v1.0.31
[INFO] [stderr]    Compiling libc v0.2.71
[INFO] [stderr]    Compiling serde v1.0.112
[INFO] [stderr]    Compiling crossbeam-utils v0.5.0
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling bio v0.25.0
[INFO] [stderr]    Compiling crossbeam-utils v0.6.6
[INFO] [stderr]    Compiling libsqlite3-sys v0.18.0
[INFO] [stderr]    Compiling textwrap v0.10.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling ordered-float v1.0.2
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling dotenv v0.9.0
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.5.2
[INFO] [stderr]    Compiling bv v0.10.0
[INFO] [stderr]    Compiling crossbeam-deque v0.5.2
[INFO] [stderr]    Compiling crossbeam-epoch v0.6.1
[INFO] [stderr]    Compiling rand v0.5.6
[INFO] [stderr]    Compiling rand v0.4.6
[INFO] [stderr]    Compiling backtrace v0.3.49
[INFO] [stderr]    Compiling slice-deque v0.1.16
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling flate2 v1.0.14
[INFO] [stderr]    Compiling buf_redux v0.7.1
[INFO] [stderr]    Compiling rand v0.3.23
[INFO] [stderr]    Compiling statrs v0.9.0
[INFO] [stderr]    Compiling parking_lot_core v0.3.1
[INFO] [stderr]    Compiling parking_lot v0.6.4
[INFO] [stderr]    Compiling crossbeam-channel v0.2.6
[INFO] [stderr]    Compiling crossbeam v0.4.1
[INFO] [stderr]    Compiling synstructure v0.12.4
[INFO] [stderr]    Compiling serde_derive v1.0.112
[INFO] [stderr]    Compiling diesel_derives v1.4.1
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.20
[INFO] [stderr]    Compiling failure v0.1.8
[INFO] [stderr]    Compiling thiserror v1.0.20
[INFO] [stderr]    Compiling indextree v3.3.0
[INFO] [stderr]    Compiling diesel v1.4.5
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bstr v0.2.13
[INFO] [stderr]    Compiling bio-types v0.6.0
[INFO] [stderr]    Compiling multimap v0.4.0
[INFO] [stderr]    Compiling seq_io v0.3.0
[INFO] [stderr]    Compiling clap v2.32.0
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling migrations_internals v1.4.1
[INFO] [stderr]    Compiling migrations_macros v1.4.2
[INFO] [stderr]    Compiling diesel_migrations v1.4.0
[INFO] [stderr]    Compiling ncbitaxonomy v1.0.7 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 51s
[INFO] running `Command { std: "docker" "inspect" "1b4a99d64c44222d96702257842e2018094c52a03d774253e2bdcb6b73758c7f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1b4a99d64c44222d96702257842e2018094c52a03d774253e2bdcb6b73758c7f", kill_on_drop: false }`
[INFO] [stdout] 1b4a99d64c44222d96702257842e2018094c52a03d774253e2bdcb6b73758c7f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5c9948038467bdc3d6e8cd0e4e1cad405b1b65433cf7a7e874dbf7c6aa9407c9
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "5c9948038467bdc3d6e8cd0e4e1cad405b1b65433cf7a7e874dbf7c6aa9407c9", kill_on_drop: false }`
[INFO] [stderr]    Compiling ncbitaxonomy v1.0.7 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 6.42s
[INFO] running `Command { std: "docker" "inspect" "5c9948038467bdc3d6e8cd0e4e1cad405b1b65433cf7a7e874dbf7c6aa9407c9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5c9948038467bdc3d6e8cd0e4e1cad405b1b65433cf7a7e874dbf7c6aa9407c9", kill_on_drop: false }`
[INFO] [stdout] 5c9948038467bdc3d6e8cd0e4e1cad405b1b65433cf7a7e874dbf7c6aa9407c9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] f536eae33de0a3d6415fb1d297497070ce09e1ae2ffe1c87df4f5b875598fa66
[INFO] running `Command { std: "docker" "start" "-a" "f536eae33de0a3d6415fb1d297497070ce09e1ae2ffe1c87df4f5b875598fa66", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.59s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/ncbitaxonomy-828a3ccae677532b
[INFO] [stdout] 
[INFO] [stdout] running 23 tests
[INFO] [stdout] test tests::sqlite_distance_to_common_ancestor ... ok
[INFO] [stdout] test tests::sqlite_contains_id ... ok
[INFO] [stdout] test tests::sqlite_contains_name ... ok
[INFO] [stdout] test tests::get_lineage_sqlite ... ok
[INFO] [stdout] test tests::sqlite_distance_to_common_ancestor_taxid ... ok
[INFO] [stdout] test tests::sqlite_distance_to_common_ancestor_canonical ... ok
[INFO] [stdout] test tests::sqlite_taxid_descendants ... ok
[INFO] [stdout] test tests::sqlite_descendants ... ok
[INFO] [stdout] test tests::sqlite_get_name_by_id ... ok
[INFO] [stdout] test tests::sqlite_distance_to_common_ancestor_taxid_canonical ... ok
[INFO] [stdout] test tests::distance_to_common_ancestor_taxid_canonical ... ok
[INFO] [stdout] test tests::get_id_by_node ... ok
[INFO] [stdout] test tests::get_lineage ... ok
[INFO] [stdout] test tests::get_node_by_id ... ok
[INFO] [stdout] test tests::taxid_descendants ... ok
[INFO] [stdout] test tests::contains_id ... ok
[INFO] [stdout] test tests::contains_name ... ok
[INFO] [stdout] test tests::get_name_by_id ... ok
[INFO] [stdout] test tests::distance_to_common_ancestor_canonical ... ok
[INFO] [stdout] test tests::descendants ... ok
[INFO] [stdout] test tests::distance_to_common_ancestor ... ok
[INFO] [stdout] test tests::distance_to_common_ancestor_taxid ... ok
[INFO] [stdout] test tests::traversal ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 23 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/taxonomy_filter_fastq-958c452b2c7a4049
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/taxonomy_filter_refseq-1da32771cb9fbb91
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/taxonomy_util-5c7725800a761079
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests ncbitaxonomy
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test src/lib.rs - NcbiFileTaxonomy::from_ncbi_files (line 105) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "f536eae33de0a3d6415fb1d297497070ce09e1ae2ffe1c87df4f5b875598fa66", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f536eae33de0a3d6415fb1d297497070ce09e1ae2ffe1c87df4f5b875598fa66", kill_on_drop: false }`
[INFO] [stdout] f536eae33de0a3d6415fb1d297497070ce09e1ae2ffe1c87df4f5b875598fa66