[INFO] updating cached repository https://github.com/ban-m/partial_order_alignment [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] [stderr] From https://github.com/ban-m/partial_order_alignment [INFO] [stderr] 462f66a..a46cb41 master -> master [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] a46cb4139dfd71079ac3e81d3c05cd90bacd2d21 [INFO] testing ban-m/partial_order_alignment against 1.45.2 for beta-1.46-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment" "/workspace/builds/worker-9/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-9/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ban-m/partial_order_alignment on toolchain 1.45.2 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.45.2" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ban-m/partial_order_alignment [INFO] finished tweaking git repo https://github.com/ban-m/partial_order_alignment [INFO] tweaked toml for git repo https://github.com/ban-m/partial_order_alignment written to /workspace/builds/worker-9/source/Cargo.toml [INFO] crate git repo https://github.com/ban-m/partial_order_alignment already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+1.45.2" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3e2657094c34050dbd355db5f2ed26325742a2ab221a01b00405ec87fcef9797 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3e2657094c34050dbd355db5f2ed26325742a2ab221a01b00405ec87fcef9797", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3e2657094c34050dbd355db5f2ed26325742a2ab221a01b00405ec87fcef9797", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3e2657094c34050dbd355db5f2ed26325742a2ab221a01b00405ec87fcef9797", kill_on_drop: false }` [INFO] [stdout] 3e2657094c34050dbd355db5f2ed26325742a2ab221a01b00405ec87fcef9797 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d577e6c12b855529e3e6ff54a0151d9a8122d71d5e876a6683eec6e2175e8b25 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d577e6c12b855529e3e6ff54a0151d9a8122d71d5e876a6683eec6e2175e8b25", kill_on_drop: false }` [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling rand_xoshiro v0.4.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 8.02s [INFO] running `Command { std: "docker" "inspect" "d577e6c12b855529e3e6ff54a0151d9a8122d71d5e876a6683eec6e2175e8b25", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d577e6c12b855529e3e6ff54a0151d9a8122d71d5e876a6683eec6e2175e8b25", kill_on_drop: false }` [INFO] [stdout] d577e6c12b855529e3e6ff54a0151d9a8122d71d5e876a6683eec6e2175e8b25 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e75bb1492ff559091c0350e5809f05054fb83c0ba70a25d4a9cdc0204d7a61b8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e75bb1492ff559091c0350e5809f05054fb83c0ba70a25d4a9cdc0204d7a61b8", kill_on_drop: false }` [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling num_cpus v1.12.0 [INFO] [stderr] Compiling rayon v1.3.0 [INFO] [stderr] Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 14.77s [INFO] running `Command { std: "docker" "inspect" "e75bb1492ff559091c0350e5809f05054fb83c0ba70a25d4a9cdc0204d7a61b8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e75bb1492ff559091c0350e5809f05054fb83c0ba70a25d4a9cdc0204d7a61b8", kill_on_drop: false }` [INFO] [stdout] e75bb1492ff559091c0350e5809f05054fb83c0ba70a25d4a9cdc0204d7a61b8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+1.45.2" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 1370bb4feb0e7ab11d4fbd1f8de06d417b68e4989cda8f892ef3f4df7c9467eb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1370bb4feb0e7ab11d4fbd1f8de06d417b68e4989cda8f892ef3f4df7c9467eb", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/poa_hmm-ecbfdebc9088b950 [INFO] [stdout] [INFO] [stdout] running 32 tests [INFO] [stdout] test tests::tests::abundance_test_prior ... ignored [INFO] [stdout] test tests::tests::create ... ok [INFO] [stdout] test generate::tests::short_consensus ... ok [INFO] [stdout] test tests::tests::deletion_test ... ok [INFO] [stdout] test tests::tests::deletion_test_banded ... ok [INFO] [stdout] test tests::tests::add ... ok [INFO] [stdout] test tests::tests::insertion_test_banded ... ok [INFO] [stdout] test tests::tests::init ... ok [INFO] [stdout] test tests::tests::initialize ... ok [INFO] [stdout] test generate::tests::long_consensus ... ok [INFO] [stdout] test base_table::tests::test ... ok [INFO] [stdout] test tests::tests::mismatch_test ... ok [INFO] [stdout] test tests::tests::it_works ... ok [INFO] [stdout] test tests::tests::merge_test ... ok [INFO] [stdout] test tests::tests::forward ... ok [INFO] [stdout] test tests::tests::insertion_test ... ok [INFO] [stdout] test tests::tests::single_error_banded_test ... ignored [INFO] [stdout] test tests::tests::single_error_ccs_test ... ignored [INFO] [stdout] test tests::tests::single_error_test ... ignored [INFO] [stdout] test tests::tests::low_coverage_test ... ok [INFO] [stdout] test tests::tests::forward_check ... ok [INFO] [stdout] test tests::tests::mismatch_test_banded ... ok [INFO] [stdout] test tests::tests::connectivity_check ... ok [INFO] [stdout] test tests::tests::alignment_check ... ok [INFO] [stdout] test generate::tests::short_consensus_rand ... ok [INFO] [stdout] test tests::tests::hard_test ... ok [INFO] [stdout] test tests::tests::high_coverage_test ... test tests::tests::high_coverage_test has been running for over 60 seconds [INFO] [stdout] test generate::tests::super_long_consensus_rand ... test generate::tests::super_long_consensus_rand has been running for over 60 seconds [INFO] [stdout] test generate::tests::long_consensus_rand ... test generate::tests::long_consensus_rand has been running for over 60 seconds [INFO] [stdout] test tests::tests::random_check_forward ... test tests::tests::random_check_forward has been running for over 60 seconds [INFO] [stdout] test tests::tests::mix_test_prior ... test tests::tests::mix_test_prior has been running for over 60 seconds [INFO] [stdout] test tests::tests::random_check ... test tests::tests::random_check has been running for over 60 seconds [INFO] [stdout] test tests::tests::high_coverage_test ... ok [INFO] [stdout] test tests::tests::random_check ... ok [ERROR] error running command: no output for 300 seconds [INFO] running `Command { std: "docker" "inspect" "1370bb4feb0e7ab11d4fbd1f8de06d417b68e4989cda8f892ef3f4df7c9467eb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1370bb4feb0e7ab11d4fbd1f8de06d417b68e4989cda8f892ef3f4df7c9467eb", kill_on_drop: false }` [INFO] [stdout] 1370bb4feb0e7ab11d4fbd1f8de06d417b68e4989cda8f892ef3f4df7c9467eb