[INFO] crate bio-types 0.6.0 is already in cache
[INFO] testing bio-types-0.6.0 against beta-2020-06-03 for beta-1.45-1
[INFO] extracting crate bio-types 0.6.0 into /workspace/builds/worker-9/source
[INFO] validating manifest of crates.io crate bio-types 0.6.0 on toolchain beta-2020-06-03
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking crates.io crate bio-types 0.6.0
[INFO] finished tweaking crates.io crate bio-types 0.6.0
[INFO] tweaked toml for crates.io crate bio-types 0.6.0 written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-06-03" "build" "--frozen"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] f81217a457d59348cc769da79e87330d7d763d1e8e9545e5cd9c3d92cef8ed7b
[INFO] running `"docker" "start" "-a" "f81217a457d59348cc769da79e87330d7d763d1e8e9545e5cd9c3d92cef8ed7b"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr]    Compiling syn v1.0.30
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling regex-syntax v0.6.18
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling aho-corasick v0.7.10
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling serde_derive v1.0.111
[INFO] [stderr]    Compiling bio-types v0.6.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:55:1
[INFO] [stderr]    |
[INFO] [stderr] 55 | /// Errors that arise in parsing annotations.
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_doc_comments)]` on by default
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:77:1
[INFO] [stderr]    |
[INFO] [stderr] 77 | /// Errors that arise in maniuplating annotations
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: associated function is never used: `pos_mut`
[INFO] [stderr]   --> src/genome.rs:51:8
[INFO] [stderr]    |
[INFO] [stderr] 51 |     fn pos_mut(&mut self) -> &mut Position {
[INFO] [stderr]    |        ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 31.88s
[INFO] running `"docker" "inspect" "f81217a457d59348cc769da79e87330d7d763d1e8e9545e5cd9c3d92cef8ed7b"`
[INFO] running `"docker" "rm" "-f" "f81217a457d59348cc769da79e87330d7d763d1e8e9545e5cd9c3d92cef8ed7b"`
[INFO] [stdout] f81217a457d59348cc769da79e87330d7d763d1e8e9545e5cd9c3d92cef8ed7b
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-06-03" "test" "--frozen" "--no-run"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 9fc4f62b89bb35bdbe0dca8ecc85e5c628774df6f34ad82142f22fda2d649ed0
[INFO] running `"docker" "start" "-a" "9fc4f62b89bb35bdbe0dca8ecc85e5c628774df6f34ad82142f22fda2d649ed0"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr]    Compiling bio-types v0.6.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:55:1
[INFO] [stderr]    |
[INFO] [stderr] 55 | /// Errors that arise in parsing annotations.
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_doc_comments)]` on by default
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:77:1
[INFO] [stderr]    |
[INFO] [stderr] 77 | /// Errors that arise in maniuplating annotations
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: associated function is never used: `pos_mut`
[INFO] [stderr]   --> src/genome.rs:51:8
[INFO] [stderr]    |
[INFO] [stderr] 51 |     fn pos_mut(&mut self) -> &mut Position {
[INFO] [stderr]    |        ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:55:1
[INFO] [stderr]    |
[INFO] [stderr] 55 | /// Errors that arise in parsing annotations.
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_doc_comments)]` on by default
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:77:1
[INFO] [stderr]    |
[INFO] [stderr] 77 | /// Errors that arise in maniuplating annotations
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: associated function is never used: `pos_mut`
[INFO] [stderr]   --> src/genome.rs:51:8
[INFO] [stderr]    |
[INFO] [stderr] 51 |     fn pos_mut(&mut self) -> &mut Position {
[INFO] [stderr]    |        ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 3.70s
[INFO] running `"docker" "inspect" "9fc4f62b89bb35bdbe0dca8ecc85e5c628774df6f34ad82142f22fda2d649ed0"`
[INFO] running `"docker" "rm" "-f" "9fc4f62b89bb35bdbe0dca8ecc85e5c628774df6f34ad82142f22fda2d649ed0"`
[INFO] [stdout] 9fc4f62b89bb35bdbe0dca8ecc85e5c628774df6f34ad82142f22fda2d649ed0
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-06-03" "test" "--frozen"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 8c876414ddf477a2437e1140a490950385b6deb3d5c3c9545467773545d0b944
[INFO] running `"docker" "start" "-a" "8c876414ddf477a2437e1140a490950385b6deb3d5c3c9545467773545d0b944"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr] warning: only one of `license` or `license-file` is necessary
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:55:1
[INFO] [stderr]    |
[INFO] [stderr] 55 | /// Errors that arise in parsing annotations.
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_doc_comments)]` on by default
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:77:1
[INFO] [stderr]    |
[INFO] [stderr] 77 | /// Errors that arise in maniuplating annotations
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: associated function is never used: `pos_mut`
[INFO] [stderr]   --> src/genome.rs:51:8
[INFO] [stderr]    |
[INFO] [stderr] 51 |     fn pos_mut(&mut self) -> &mut Position {
[INFO] [stderr]    |        ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:55:1
[INFO] [stderr]    |
[INFO] [stderr] 55 | /// Errors that arise in parsing annotations.
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_doc_comments)]` on by default
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: unused doc comment
[INFO] [stderr]   --> src/annot/mod.rs:77:1
[INFO] [stderr]    |
[INFO] [stderr] 77 | /// Errors that arise in maniuplating annotations
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ rustdoc does not generate documentation for macro invocations
[INFO] [stderr]    |
[INFO] [stderr]    = help: to document an item produced by a macro, the macro must produce the documentation as part of its expansion
[INFO] [stderr] 
[INFO] [stderr] warning: associated function is never used: `pos_mut`
[INFO] [stderr]   --> src/genome.rs:51:8
[INFO] [stderr]    |
[INFO] [stderr] 51 |     fn pos_mut(&mut self) -> &mut Position {
[INFO] [stderr]    |        ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: 3 warnings emitted
[INFO] [stderr] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/bio_types-6955f56d65e40299
[INFO] [stdout] 
[INFO] [stdout] running 13 tests
[INFO] [stdout] test annot::pos::tests::loc_impl ... ok
[INFO] [stdout] test alignment::tests::test_cigar ... ok
[INFO] [stdout] test alignment::tests::test_pretty ... ok
[INFO] [stdout] test annot::pos::tests::pos_accessors ... ok
[INFO] [stdout] test strand::tests::test_strand ... ok
[INFO] [stdout] test annot::contig::tests::first_and_last ... ok
[INFO] [stdout] test annot::pos::tests::strand_conversion ... ok
[INFO] [stdout] test annot::pos::tests::string_representation ... ok
[INFO] [stdout] test annot::spliced::tests::intersection ... ok
[INFO] [stdout] test annot::contig::tests::into_outof ... ok
[INFO] [stdout] test annot::contig::tests::intersection ... ok
[INFO] [stdout] test annot::spliced::tests::into_outof ... ok
[INFO] [stdout] test annot::spliced::tests::length_start_to_contig ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests bio-types
[INFO] [stdout] 
[INFO] [stdout] running 15 tests
[INFO] [stdout] test src/annot/spliced.rs - annot::spliced::Spliced<R, S>::new (line 238) ... ok
[INFO] [stdout] test src/annot/spliced.rs - annot::spliced::Spliced (line 208) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, ReqStrand>::extend_downstream (line 177) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, S>::new (line 57) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos<R, ReqStrand>::sub_assign (line 131) ... ok
[INFO] [stdout] test src/alignment.rs - alignment::Alignment::cigar (line 89) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos<R, S>::new (line 55) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, ReqStrand>::extend_upstream (line 150) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos<R, ReqStrand>::add_assign (line 100) ... ok
[INFO] [stdout] test src/annot/mod.rs - annot (line 30) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig<R, S>::with_first_length (line 82) ... ok
[INFO] [stdout] test src/annot/refids.rs - annot::refids::RefIDSet (line 14) ... ok
[INFO] [stdout] test src/annot/contig.rs - annot::contig::Contig (line 32) ... ok
[INFO] [stdout] test src/annot/pos.rs - annot::pos::Pos (line 31) ... ok
[INFO] [stdout] test src/strand.rs - strand::ReqStrand::on_strand (line 153) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 15 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `"docker" "inspect" "8c876414ddf477a2437e1140a490950385b6deb3d5c3c9545467773545d0b944"`
[INFO] running `"docker" "rm" "-f" "8c876414ddf477a2437e1140a490950385b6deb3d5c3c9545467773545d0b944"`
[INFO] [stdout] 8c876414ddf477a2437e1140a490950385b6deb3d5c3c9545467773545d0b944