[INFO] updating cached repository https://github.com/guertinlab/kmer_mask_em
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] c1ae4fc642bd6330c9db7a4cf31f9b304ff6a874
[INFO] testing guertinlab/kmer_mask_em against beta-2020-06-03 for beta-1.45-1
[INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em" "/workspace/builds/worker-1/source"`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/guertinlab/kmer_mask_em on toolchain beta-2020-06-03
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/guertinlab/kmer_mask_em
[INFO] finished tweaking git repo https://github.com/guertinlab/kmer_mask_em
[INFO] tweaked toml for git repo https://github.com/guertinlab/kmer_mask_em written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] crate git repo https://github.com/guertinlab/kmer_mask_em already has a lockfile, it will not be regenerated
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr] error: the lock file /workspace/builds/worker-1/source/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag.
[INFO] the lockfile is outdated, regenerating it
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"`
[INFO] running `"/workspace/cargo-home/bin/cargo" "+beta-2020-06-03" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-06-03" "build" "--frozen"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] eff46795c7454a5e9041817c370fef8171939437e1f913f086d13805eb044e2a
[INFO] running `"docker" "start" "-a" "eff46795c7454a5e9041817c370fef8171939437e1f913f086d13805eb044e2a"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr]    Compiling deque v0.3.2
[INFO] [stderr]    Compiling docopt v0.7.0
[INFO] [stderr]    Compiling rayon v0.6.0
[INFO] [stderr]    Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 13.48s
[INFO] running `"docker" "inspect" "eff46795c7454a5e9041817c370fef8171939437e1f913f086d13805eb044e2a"`
[INFO] running `"docker" "rm" "-f" "eff46795c7454a5e9041817c370fef8171939437e1f913f086d13805eb044e2a"`
[INFO] [stdout] eff46795c7454a5e9041817c370fef8171939437e1f913f086d13805eb044e2a
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-06-03" "test" "--frozen" "--no-run"`
[INFO] [stdout] 1fb660b2f269710eb092dc5639af5d810c18cd0a8d4265044791fd0621bbb50d
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `"docker" "start" "-a" "1fb660b2f269710eb092dc5639af5d810c18cd0a8d4265044791fd0621bbb50d"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr]    Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.28s
[INFO] running `"docker" "inspect" "1fb660b2f269710eb092dc5639af5d810c18cd0a8d4265044791fd0621bbb50d"`
[INFO] running `"docker" "rm" "-f" "1fb660b2f269710eb092dc5639af5d810c18cd0a8d4265044791fd0621bbb50d"`
[INFO] [stdout] 1fb660b2f269710eb092dc5639af5d810c18cd0a8d4265044791fd0621bbb50d
[INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2020-06-03" "test" "--frozen"`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 580b31401fa55ff4d8928296d6931a37b08fbc7431d4345cd51c25c408f77fa7
[INFO] running `"docker" "start" "-a" "580b31401fa55ff4d8928296d6931a37b08fbc7431d4345cd51c25c408f77fa7"`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.22s
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/kmermask_em-09ed78dc8aa37b41
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `"docker" "inspect" "580b31401fa55ff4d8928296d6931a37b08fbc7431d4345cd51c25c408f77fa7"`
[INFO] running `"docker" "rm" "-f" "580b31401fa55ff4d8928296d6931a37b08fbc7431d4345cd51c25c408f77fa7"`
[INFO] [stdout] 580b31401fa55ff4d8928296d6931a37b08fbc7431d4345cd51c25c408f77fa7