[INFO] fetching crate hdf5 0.6.1... [INFO] testing hdf5-0.6.1 against 1.44.0 for beta-1.45-1 [INFO] extracting crate hdf5 0.6.1 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate hdf5 0.6.1 on toolchain 1.44.0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5 0.6.1 [INFO] finished tweaking crates.io crate hdf5 0.6.1 [INFO] tweaked toml for crates.io crate hdf5 0.6.1 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate crates.io crate hdf5 0.6.1 already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "build" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4b2474c3e6e428d5f261519cca0f0b373bbebae70de9b2c44291ae0752670374 [INFO] running `"docker" "start" "-a" "4b2474c3e6e428d5f261519cca0f0b373bbebae70de9b2c44291ae0752670374"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling libc v0.2.68 [INFO] [stderr] Compiling libloading v0.6.0 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling proc-macro2 v1.0.10 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Compiling smallvec v1.3.0 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling ascii v1.0.0 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling lock_api v0.3.4 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Compiling parking_lot_core v0.7.1 [INFO] [stderr] Compiling hdf5-types v0.6.1 [INFO] [stderr] Compiling parking_lot v0.10.2 [INFO] [stderr] Compiling regex v1.3.6 [INFO] [stderr] Compiling hdf5-sys v0.6.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-86c0b17fdffce29a/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x558076858d04 - backtrace::backtrace::libunwind::trace::hc1c4a1d8ad423b97 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x558076858d04 - backtrace::backtrace::trace_unsynchronized::h82274781060cb056 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x558076858d04 - std::sys_common::backtrace::_print_fmt::h2a45d89b653a4da8 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x558076858d04 - ::fmt::h41a0a93ab85e6aa1 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x55807687d70c - core::fmt::write::hdaea18585065a96d [INFO] [stderr] at src/libcore/fmt/mod.rs:1069 [INFO] [stderr] 5: 0x558076855be3 - std::io::Write::write_fmt::h0cea70c809005252 [INFO] [stderr] at src/libstd/io/mod.rs:1504 [INFO] [stderr] 6: 0x55807685b385 - std::sys_common::backtrace::_print::hd95f9978cc145ca4 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x55807685b385 - std::sys_common::backtrace::print::hfb25ca2291be47d0 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x55807685b385 - std::panicking::default_hook::{{closure}}::h44f76cee5dc8591c [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x55807685b0c2 - std::panicking::default_hook::h198e1a712910f1e6 [INFO] [stderr] at src/libstd/panicking.rs:218 [INFO] [stderr] 10: 0x55807685b9e2 - std::panicking::rust_panic_with_hook::hc0b4730bb8013f9d [INFO] [stderr] at src/libstd/panicking.rs:511 [INFO] [stderr] 11: 0x558076841111 - std::panicking::begin_panic::h118c6a948b28625e [INFO] [stderr] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:438 [INFO] [stderr] 12: 0x5580766085cc - build_script_build::LibrarySearcher::try_locate_hdf5_library::hef2d4332cfc478da [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523 [INFO] [stderr] 13: 0x5580766099ac - build_script_build::main::hb0c77a7518d78b90 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:601 [INFO] [stderr] 14: 0x5580766165eb - std::rt::lang_start::{{closure}}::h824d8ed90c447021 [INFO] [stderr] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55807685be28 - std::rt::lang_start_internal::{{closure}}::h7a212202ff76034b [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55807685be28 - std::panicking::try::do_call::h6d214a73427d759b [INFO] [stderr] at src/libstd/panicking.rs:331 [INFO] [stderr] 17: 0x55807685be28 - std::panicking::try::hc078f0e11721d1cb [INFO] [stderr] at src/libstd/panicking.rs:274 [INFO] [stderr] 18: 0x55807685be28 - std::panic::catch_unwind::hb31c05be30625612 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x55807685be28 - std::rt::lang_start_internal::hcf7fb98a775d5af0 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x5580766165c7 - std::rt::lang_start::h5a192647076918ad [INFO] [stderr] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55807660a46a - main [INFO] [stderr] 22: 0x7f4c010f40b3 - __libc_start_main [INFO] [stderr] 23: 0x55807660419e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `"docker" "inspect" "4b2474c3e6e428d5f261519cca0f0b373bbebae70de9b2c44291ae0752670374"` [INFO] running `"docker" "rm" "-f" "4b2474c3e6e428d5f261519cca0f0b373bbebae70de9b2c44291ae0752670374"` [INFO] [stdout] 4b2474c3e6e428d5f261519cca0f0b373bbebae70de9b2c44291ae0752670374