[INFO] crate global-supertrees 0.1.0 is already in cache [INFO] testing global-supertrees-0.1.0 against 1.44.0 for beta-1.45-1 [INFO] extracting crate global-supertrees 0.1.0 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate global-supertrees 0.1.0 on toolchain 1.44.0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate global-supertrees 0.1.0 [INFO] finished tweaking crates.io crate global-supertrees 0.1.0 [INFO] tweaked toml for crates.io crate global-supertrees 0.1.0 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "build" "--frozen"` [INFO] [stdout] e72252145ad44cd1641a1a7a312c0c853e4ff0d4b5584a68e7559f87a3dba029 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "e72252145ad44cd1641a1a7a312c0c853e4ff0d4b5584a68e7559f87a3dba029"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling bincode v1.2.1 [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 5.50s [INFO] running `"docker" "inspect" "e72252145ad44cd1641a1a7a312c0c853e4ff0d4b5584a68e7559f87a3dba029"` [INFO] running `"docker" "rm" "-f" "e72252145ad44cd1641a1a7a312c0c853e4ff0d4b5584a68e7559f87a3dba029"` [INFO] [stdout] e72252145ad44cd1641a1a7a312c0c853e4ff0d4b5584a68e7559f87a3dba029 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 113fbe96323cc29dc16491c075fede178f7bd92833d599cebb751f7e5b60b03c [INFO] running `"docker" "start" "-a" "113fbe96323cc29dc16491c075fede178f7bd92833d599cebb751f7e5b60b03c"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.78s [INFO] running `"docker" "inspect" "113fbe96323cc29dc16491c075fede178f7bd92833d599cebb751f7e5b60b03c"` [INFO] running `"docker" "rm" "-f" "113fbe96323cc29dc16491c075fede178f7bd92833d599cebb751f7e5b60b03c"` [INFO] [stdout] 113fbe96323cc29dc16491c075fede178f7bd92833d599cebb751f7e5b60b03c [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] bc468dc5df9c70404499fa429ac04ad8f285ed4cad0c739afcc3896fb8c7d1f9 [INFO] running `"docker" "start" "-a" "bc468dc5df9c70404499fa429ac04ad8f285ed4cad0c739afcc3896fb8c7d1f9"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:54:92 [INFO] [stderr] | [INFO] [stderr] 54 | pub fn cache_mapping(mapping : &BTreeMap<[u8; 10], u32>, path : &String) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:61:82 [INFO] [stderr] | [INFO] [stderr] 61 | pub fn load_cache_mapping(path : &String) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: unused import: `rayon::prelude` [INFO] [stderr] --> src/tree_merging.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use rayon::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `trees` [INFO] [stderr] --> src/main.rs:98:9 [INFO] [stderr] | [INFO] [stderr] 98 | let trees : Vec = distance_matrices.par_iter().map(| dm | dm.neighbour_joining()).collect(); [INFO] [stderr] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_trees` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:10:9 [INFO] [stderr] | [INFO] [stderr] 10 | let distance_matrices: Vec = [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_distance_matrices` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `merge_distance_matrices` [INFO] [stderr] --> src/tree_merging.rs:102:4 [INFO] [stderr] | [INFO] [stderr] 102 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/global_supertrees-4530443eda023abb [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok [INFO] [stdout] test tests::tests::test_find_first_common_ancestor ... ok [INFO] [stdout] test tests::tests::test_find_first_zero ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok [INFO] [stdout] test tests::tests::test_load_tree_file ... ok [INFO] [stdout] test tests::tests::test_get_levels_from_root ... ok [INFO] [stdout] test tests::tests::test_to_dot ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_simple ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium_nested ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium ... ok [INFO] [stdout] test tests::tests::test_get_partial_tree ... ok [INFO] [stdout] test tests::tests::test_merge_organisms ... FAILED [INFO] [stdout] test tests::tests::test_batch_id_tax_mapping ... FAILED [INFO] [stdout] test tests::tests::test_neighbour_joining ... ok [INFO] [stdout] test tests::tests::test_tree_merging ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_organisms stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_organisms' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:13 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5605a42f0684 - backtrace::backtrace::libunwind::trace::hc1c4a1d8ad423b97 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x5605a42f0684 - backtrace::backtrace::trace_unsynchronized::h82274781060cb056 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x5605a42f0684 - std::sys_common::backtrace::_print_fmt::h2a45d89b653a4da8 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x5605a42f0684 - ::fmt::h41a0a93ab85e6aa1 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x5605a431b5ec - core::fmt::write::hdaea18585065a96d [INFO] [stdout] at src/libcore/fmt/mod.rs:1069 [INFO] [stdout] 5: 0x5605a4063ed5 - std::io::Write::write_fmt::h42f0550b6bd39c6e [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/io/mod.rs:1504 [INFO] [stdout] 6: 0x5605a42ea8b1 - std::io::impls::>::write_fmt::h223d7b7033cad46d [INFO] [stdout] at src/libstd/io/impls.rs:156 [INFO] [stdout] 7: 0x5605a42f2f65 - std::sys_common::backtrace::_print::hd95f9978cc145ca4 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x5605a42f2f65 - std::sys_common::backtrace::print::hfb25ca2291be47d0 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x5605a42f2f65 - std::panicking::default_hook::{{closure}}::h44f76cee5dc8591c [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x5605a42f2c4b - std::panicking::default_hook::h198e1a712910f1e6 [INFO] [stdout] at src/libstd/panicking.rs:215 [INFO] [stdout] 11: 0x5605a42f35c2 - std::panicking::rust_panic_with_hook::hc0b4730bb8013f9d [INFO] [stdout] at src/libstd/panicking.rs:511 [INFO] [stdout] 12: 0x5605a42f31ab - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:419 [INFO] [stdout] 13: 0x5605a43193b1 - core::panicking::panic_fmt::h1ac71ad045d55416 [INFO] [stdout] at src/libcore/panicking.rs:111 [INFO] [stdout] 14: 0x5605a43191d3 - core::option::expect_none_failed::hb40004d71d61b685 [INFO] [stdout] at src/libcore/option.rs:1268 [INFO] [stdout] 15: 0x5605a3ff8e09 - core::result::Result::expect::he26c00b712a11675 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libcore/result.rs:963 [INFO] [stdout] 16: 0x5605a4058502 - global_supertrees::uniprot::load_mapping_file::h34e2581c4fd8542c [INFO] [stdout] at src/uniprot.rs:34 [INFO] [stdout] 17: 0x5605a3fbb828 - global_supertrees::tests::tests::test_merge_organisms::hdfab0ae1966fc1ba [INFO] [stdout] at src/tests.rs:237 [INFO] [stdout] 18: 0x5605a3fbb7ca - global_supertrees::tests::tests::test_merge_organisms::{{closure}}::hbe661fa6d97ccd5c [INFO] [stdout] at src/tests.rs:235 [INFO] [stdout] 19: 0x5605a404e3ae - core::ops::function::FnOnce::call_once::h48fd6989bc340ce8 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libcore/ops/function.rs:232 [INFO] [stdout] 20: 0x5605a408b366 - as core::ops::function::FnOnce>::call_once::hc165f65f4331a55c [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/liballoc/boxed.rs:1008 [INFO] [stdout] 21: 0x5605a408b366 - as core::ops::function::FnOnce<()>>::call_once::hb89f1f769cad07ce [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:318 [INFO] [stdout] 22: 0x5605a408b366 - std::panicking::try::do_call::h104f7f3dae5a1b29 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:331 [INFO] [stdout] 23: 0x5605a408b366 - std::panicking::try::h0e20f01361cba753 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:274 [INFO] [stdout] 24: 0x5605a408b366 - std::panic::catch_unwind::h0bd0c84b5f4cd121 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:394 [INFO] [stdout] 25: 0x5605a408b366 - test::run_test_in_process::hf34c22adfeb6853d [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 26: 0x5605a408b366 - test::run_test::run_test_inner::{{closure}}::h40d568b4c10a12f1 [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 27: 0x5605a4063386 - std::sys_common::backtrace::__rust_begin_short_backtrace::hffd9774ad3f2d778 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 28: 0x5605a4068715 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h4594020476cf52d4 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/thread/mod.rs:475 [INFO] [stdout] 29: 0x5605a4068715 - as core::ops::function::FnOnce<()>>::call_once::h9d0a6d45b73e29e4 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:318 [INFO] [stdout] 30: 0x5605a4068715 - std::panicking::try::do_call::h902fd77b30bb3bb7 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:331 [INFO] [stdout] 31: 0x5605a4068715 - std::panicking::try::hc17d3a628e65d49d [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:274 [INFO] [stdout] 32: 0x5605a4068715 - std::panic::catch_unwind::h9c9d49cbb6b18017 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:394 [INFO] [stdout] 33: 0x5605a4068715 - std::thread::Builder::spawn_unchecked::{{closure}}::h6a6f5a333fd631a2 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/thread/mod.rs:474 [INFO] [stdout] 34: 0x5605a4068715 - core::ops::function::FnOnce::call_once{{vtable.shim}}::ha6fb197e0ce57f73 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libcore/ops/function.rs:232 [INFO] [stdout] 35: 0x5605a42f9eda - as core::ops::function::FnOnce>::call_once::h1f1fac7de7dd9691 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/liballoc/boxed.rs:1008 [INFO] [stdout] 36: 0x5605a42f9eda - as core::ops::function::FnOnce>::call_once::ha031f48633a6af54 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/liballoc/boxed.rs:1008 [INFO] [stdout] 37: 0x5605a42f9eda - std::sys::unix::thread::Thread::new::thread_start::h241864caf436e182 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 38: 0x7f28e8a87609 - start_thread [INFO] [stdout] 39: 0x7f28e8993103 - __clone [INFO] [stdout] 40: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_batch_id_tax_mapping stdout ---- [INFO] [stdout] thread 'tests::tests::test_batch_id_tax_mapping' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/uniprot.rs:34:13 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5605a42f0684 - backtrace::backtrace::libunwind::trace::hc1c4a1d8ad423b97 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x5605a42f0684 - backtrace::backtrace::trace_unsynchronized::h82274781060cb056 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x5605a42f0684 - std::sys_common::backtrace::_print_fmt::h2a45d89b653a4da8 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x5605a42f0684 - ::fmt::h41a0a93ab85e6aa1 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x5605a431b5ec - core::fmt::write::hdaea18585065a96d [INFO] [stdout] at src/libcore/fmt/mod.rs:1069 [INFO] [stdout] 5: 0x5605a4063ed5 - std::io::Write::write_fmt::h42f0550b6bd39c6e [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/io/mod.rs:1504 [INFO] [stdout] 6: 0x5605a42ea8b1 - std::io::impls::>::write_fmt::h223d7b7033cad46d [INFO] [stdout] at src/libstd/io/impls.rs:156 [INFO] [stdout] 7: 0x5605a42f2f65 - std::sys_common::backtrace::_print::hd95f9978cc145ca4 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x5605a42f2f65 - std::sys_common::backtrace::print::hfb25ca2291be47d0 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x5605a42f2f65 - std::panicking::default_hook::{{closure}}::h44f76cee5dc8591c [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x5605a42f2c4b - std::panicking::default_hook::h198e1a712910f1e6 [INFO] [stdout] at src/libstd/panicking.rs:215 [INFO] [stdout] 11: 0x5605a42f35c2 - std::panicking::rust_panic_with_hook::hc0b4730bb8013f9d [INFO] [stdout] at src/libstd/panicking.rs:511 [INFO] [stdout] 12: 0x5605a42f31ab - rust_begin_unwind [INFO] [stdout] at src/libstd/panicking.rs:419 [INFO] [stdout] 13: 0x5605a43193b1 - core::panicking::panic_fmt::h1ac71ad045d55416 [INFO] [stdout] at src/libcore/panicking.rs:111 [INFO] [stdout] 14: 0x5605a43191d3 - core::option::expect_none_failed::hb40004d71d61b685 [INFO] [stdout] at src/libcore/option.rs:1268 [INFO] [stdout] 15: 0x5605a3ff8e09 - core::result::Result::expect::he26c00b712a11675 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libcore/result.rs:963 [INFO] [stdout] 16: 0x5605a4058502 - global_supertrees::uniprot::load_mapping_file::h34e2581c4fd8542c [INFO] [stdout] at src/uniprot.rs:34 [INFO] [stdout] 17: 0x5605a3fbb5a0 - global_supertrees::tests::tests::test_batch_id_tax_mapping::hded45ab78f96479e [INFO] [stdout] at src/tests.rs:230 [INFO] [stdout] 18: 0x5605a3fbb45a - global_supertrees::tests::tests::test_batch_id_tax_mapping::{{closure}}::h9da9fa09104a7a5a [INFO] [stdout] at src/tests.rs:227 [INFO] [stdout] 19: 0x5605a404e69e - core::ops::function::FnOnce::call_once::hd665478dafccb01f [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libcore/ops/function.rs:232 [INFO] [stdout] 20: 0x5605a408b366 - as core::ops::function::FnOnce>::call_once::hc165f65f4331a55c [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/liballoc/boxed.rs:1008 [INFO] [stdout] 21: 0x5605a408b366 - as core::ops::function::FnOnce<()>>::call_once::hb89f1f769cad07ce [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:318 [INFO] [stdout] 22: 0x5605a408b366 - std::panicking::try::do_call::h104f7f3dae5a1b29 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:331 [INFO] [stdout] 23: 0x5605a408b366 - std::panicking::try::h0e20f01361cba753 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:274 [INFO] [stdout] 24: 0x5605a408b366 - std::panic::catch_unwind::h0bd0c84b5f4cd121 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:394 [INFO] [stdout] 25: 0x5605a408b366 - test::run_test_in_process::hf34c22adfeb6853d [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 26: 0x5605a408b366 - test::run_test::run_test_inner::{{closure}}::h40d568b4c10a12f1 [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 27: 0x5605a4063386 - std::sys_common::backtrace::__rust_begin_short_backtrace::hffd9774ad3f2d778 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 28: 0x5605a4068715 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h4594020476cf52d4 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/thread/mod.rs:475 [INFO] [stdout] 29: 0x5605a4068715 - as core::ops::function::FnOnce<()>>::call_once::h9d0a6d45b73e29e4 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:318 [INFO] [stdout] 30: 0x5605a4068715 - std::panicking::try::do_call::h902fd77b30bb3bb7 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:331 [INFO] [stdout] 31: 0x5605a4068715 - std::panicking::try::hc17d3a628e65d49d [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panicking.rs:274 [INFO] [stdout] 32: 0x5605a4068715 - std::panic::catch_unwind::h9c9d49cbb6b18017 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/panic.rs:394 [INFO] [stdout] 33: 0x5605a4068715 - std::thread::Builder::spawn_unchecked::{{closure}}::h6a6f5a333fd631a2 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libstd/thread/mod.rs:474 [INFO] [stdout] 34: 0x5605a4068715 - core::ops::function::FnOnce::call_once{{vtable.shim}}::ha6fb197e0ce57f73 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/libcore/ops/function.rs:232 [INFO] [stdout] 35: 0x5605a42f9eda - as core::ops::function::FnOnce>::call_once::h1f1fac7de7dd9691 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/liballoc/boxed.rs:1008 [INFO] [stdout] 36: 0x5605a42f9eda - as core::ops::function::FnOnce>::call_once::ha031f48633a6af54 [INFO] [stdout] at /rustc/49cae55760da0a43428eba73abcb659bb70cf2e4/src/liballoc/boxed.rs:1008 [INFO] [stdout] 37: 0x5605a42f9eda - std::sys::unix::thread::Thread::new::thread_start::h241864caf436e182 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 38: 0x7f28e8a87609 - start_thread [INFO] [stdout] 39: 0x7f28e8993103 - __clone [INFO] [stdout] 40: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::tests::test_batch_id_tax_mapping [INFO] [stdout] tests::tests::test_merge_organisms [INFO] [stdout] [INFO] [stdout] test result: FAILED. 14 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin global-supertrees' [INFO] running `"docker" "inspect" "bc468dc5df9c70404499fa429ac04ad8f285ed4cad0c739afcc3896fb8c7d1f9"` [INFO] running `"docker" "rm" "-f" "bc468dc5df9c70404499fa429ac04ad8f285ed4cad0c739afcc3896fb8c7d1f9"` [INFO] [stdout] bc468dc5df9c70404499fa429ac04ad8f285ed4cad0c739afcc3896fb8c7d1f9