[INFO] crate checkm 0.0.1 is already in cache [INFO] testing checkm-0.0.1 against 1.44.0 for beta-1.45-1 [INFO] extracting crate checkm 0.0.1 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate checkm 0.0.1 on toolchain 1.44.0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate checkm 0.0.1 [INFO] finished tweaking crates.io crate checkm 0.0.1 [INFO] tweaked toml for crates.io crate checkm 0.0.1 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "build" "--frozen"` [INFO] [stdout] 0096fb0652f3e733e21fb6ad9ab67527d552965238ccddd063cd9052bf2701a3 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "0096fb0652f3e733e21fb6ad9ab67527d552965238ccddd063cd9052bf2701a3"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling checkm v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 7.94s [INFO] running `"docker" "inspect" "0096fb0652f3e733e21fb6ad9ab67527d552965238ccddd063cd9052bf2701a3"` [INFO] running `"docker" "rm" "-f" "0096fb0652f3e733e21fb6ad9ab67527d552965238ccddd063cd9052bf2701a3"` [INFO] [stdout] 0096fb0652f3e733e21fb6ad9ab67527d552965238ccddd063cd9052bf2701a3 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 06b975ababad76051eb60efcff2b7464bf4673e50e1f7456d954ba5d4ec4050b [INFO] running `"docker" "start" "-a" "06b975ababad76051eb60efcff2b7464bf4673e50e1f7456d954ba5d4ec4050b"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling checkm v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.89s [INFO] running `"docker" "inspect" "06b975ababad76051eb60efcff2b7464bf4673e50e1f7456d954ba5d4ec4050b"` [INFO] running `"docker" "rm" "-f" "06b975ababad76051eb60efcff2b7464bf4673e50e1f7456d954ba5d4ec4050b"` [INFO] [stdout] 06b975ababad76051eb60efcff2b7464bf4673e50e1f7456d954ba5d4ec4050b [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] a989aff7e9ee83cdeba99df29053f3b8134120ab9ee4e1edee8a8be140dc9cec [INFO] running `"docker" "start" "-a" "a989aff7e9ee83cdeba99df29053f3b8134120ab9ee4e1edee8a8be140dc9cec"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.19s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/checkm-28cf34c6489f5f7b [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test test::test_good_quality_genome_names ... ok [INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok [INFO] [stdout] test test::test_ordering_5times ... ok [INFO] [stdout] test test::test_ordering_4times ... ok [INFO] [stdout] test test::test_fasta_ordering_4times ... ok [INFO] [stdout] test test::test_retrieve ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests checkm [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "a989aff7e9ee83cdeba99df29053f3b8134120ab9ee4e1edee8a8be140dc9cec"` [INFO] running `"docker" "rm" "-f" "a989aff7e9ee83cdeba99df29053f3b8134120ab9ee4e1edee8a8be140dc9cec"` [INFO] [stdout] a989aff7e9ee83cdeba99df29053f3b8134120ab9ee4e1edee8a8be140dc9cec