[INFO] cloning repository https://github.com/zaeleus/noodles-fpkm [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/zaeleus/noodles-fpkm" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles-fpkm"` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles-fpkm'... [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] ac8e247a9b65a13d7fe98acccf63a9e46752422d [INFO] testing zaeleus/noodles-fpkm against 1.44.0 for beta-1.45-1 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles-fpkm" "/workspace/builds/worker-5/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/zaeleus/noodles-fpkm on toolchain 1.44.0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/zaeleus/noodles-fpkm [INFO] finished tweaking git repo https://github.com/zaeleus/noodles-fpkm [INFO] tweaked toml for git repo https://github.com/zaeleus/noodles-fpkm written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate git repo https://github.com/zaeleus/noodles-fpkm already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "build" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] dc13bf0725aac3ada0e095d2fb10372188136235aeb4296220d2143bda8e5591 [INFO] running `"docker" "start" "-a" "dc13bf0725aac3ada0e095d2fb10372188136235aeb4296220d2143bda8e5591"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling libc v0.2.60 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling log v0.4.7 [INFO] [stderr] Compiling bitflags v1.1.0 [INFO] [stderr] Compiling regex v1.1.9 [INFO] [stderr] Compiling bit-vec v0.6.1 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling regex-syntax v0.6.8 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling regex-automata v0.1.7 [INFO] [stderr] Compiling atty v0.2.12 [INFO] [stderr] Compiling flate2 v1.0.9 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling aho-corasick v0.7.4 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling bstr v0.2.2 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling noodles v0.1.0 (https://github.com/zaeleus/noodles.git?rev=699e849407ff5b8f445926d08757531135d262a6#699e8494) [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling noodles-fpkm v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 48.25s [INFO] running `"docker" "inspect" "dc13bf0725aac3ada0e095d2fb10372188136235aeb4296220d2143bda8e5591"` [INFO] running `"docker" "rm" "-f" "dc13bf0725aac3ada0e095d2fb10372188136235aeb4296220d2143bda8e5591"` [INFO] [stdout] dc13bf0725aac3ada0e095d2fb10372188136235aeb4296220d2143bda8e5591 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 6dd8f7a86dec63d98bbd1610c3596053d3119d86f0b3b422ded94dcf85f07bf7 [INFO] running `"docker" "start" "-a" "6dd8f7a86dec63d98bbd1610c3596053d3119d86f0b3b422ded94dcf85f07bf7"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling noodles-fpkm v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] warning: this method call currently resolves to `<&[T; N] as IntoIterator>::into_iter` (due to autoref coercions), but that might change in the future when `IntoIterator` impls for arrays are added. [INFO] [stderr] --> src/lib.rs:107:18 [INFO] [stderr] | [INFO] [stderr] 107 | features.into_iter().cloned().collect() [INFO] [stderr] | ^^^^^^^^^ help: use `.iter()` instead of `.into_iter()` to avoid ambiguity: `iter` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(array_into_iter)]` on by default [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #66145 [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.36s [INFO] running `"docker" "inspect" "6dd8f7a86dec63d98bbd1610c3596053d3119d86f0b3b422ded94dcf85f07bf7"` [INFO] running `"docker" "rm" "-f" "6dd8f7a86dec63d98bbd1610c3596053d3119d86f0b3b422ded94dcf85f07bf7"` [INFO] [stdout] 6dd8f7a86dec63d98bbd1610c3596053d3119d86f0b3b422ded94dcf85f07bf7 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 9ce81fac8dc988b2e6246c7ef0175f73267543ec62ed255a1d97fb1a34da9ae8 [INFO] running `"docker" "start" "-a" "9ce81fac8dc988b2e6246c7ef0175f73267543ec62ed255a1d97fb1a34da9ae8"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] warning: this method call currently resolves to `<&[T; N] as IntoIterator>::into_iter` (due to autoref coercions), but that might change in the future when `IntoIterator` impls for arrays are added. [INFO] [stderr] --> src/lib.rs:107:18 [INFO] [stderr] | [INFO] [stderr] 107 | features.into_iter().cloned().collect() [INFO] [stderr] | ^^^^^^^^^ help: use `.iter()` instead of `.into_iter()` to avoid ambiguity: `iter` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(array_into_iter)]` on by default [INFO] [stderr] = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in a future release! [INFO] [stderr] = note: for more information, see issue #66145 [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.10s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/noodles_fpkm-ba271a89f596d540 [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test counts::tests::test_parse_count ... ok [INFO] [stdout] test counts::tests::test_insert_count ... ok [INFO] [stdout] test tests::test_calculate_fpkm ... ok [INFO] [stdout] test tests::test_calculate_fpkms_with_missing_feature ... ok [INFO] [stdout] test tests::test_calculate_tpm ... ok [INFO] [stdout] test tests::test_calculate_fpkms_is_ordered_by_feature_id ... ok [INFO] [stdout] test tests::test_sum_nonoverlapping_interval_lengths ... ok [INFO] [stdout] test counts::tests::test_parse_name ... ok [INFO] [stdout] test tests::test_calculate_fpkms ... ok [INFO] [stdout] test counts::tests::test_read_counts_with_duplicate_identifiers ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/noodles_fpkm-16208ff054a61ec5 [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_write_expressions ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests noodles-fpkm [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test src/features.rs - features::Feature::len (line 23) ... ok [INFO] [stdout] test src/features.rs - features::merge_intervals (line 56) ... ok [INFO] [stdout] test src/counts.rs - counts::sum_counts (line 109) ... ok [INFO] [stdout] test src/counts.rs - counts::read_counts (line 28) ... ok [INFO] [stdout] test src/features.rs - features::read_features (line 103) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "9ce81fac8dc988b2e6246c7ef0175f73267543ec62ed255a1d97fb1a34da9ae8"` [INFO] running `"docker" "rm" "-f" "9ce81fac8dc988b2e6246c7ef0175f73267543ec62ed255a1d97fb1a34da9ae8"` [INFO] [stdout] 9ce81fac8dc988b2e6246c7ef0175f73267543ec62ed255a1d97fb1a34da9ae8