[INFO] cloning repository https://github.com/zaeleus/noodles-count-features [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/zaeleus/noodles-count-features" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles-count-features"` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles-count-features'... [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 62469b2ddfd9201e54e1319399b450723941d6d5 [INFO] testing zaeleus/noodles-count-features against 1.44.0 for beta-1.45-1 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles-count-features" "/workspace/builds/worker-4/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/zaeleus/noodles-count-features on toolchain 1.44.0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/zaeleus/noodles-count-features [INFO] finished tweaking git repo https://github.com/zaeleus/noodles-count-features [INFO] tweaked toml for git repo https://github.com/zaeleus/noodles-count-features written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/zaeleus/noodles-count-features already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "build" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] efa73470eb787b16df7dffba64412219693b4f9f4e114d879a2f6f4577d5d744 [INFO] running `"docker" "start" "-a" "efa73470eb787b16df7dffba64412219693b4f9f4e114d879a2f6f4577d5d744"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling proc-macro2 v1.0.13 [INFO] [stderr] Compiling ryu v1.0.4 [INFO] [stderr] Compiling syn v1.0.22 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling bytes v0.5.4 [INFO] [stderr] Compiling pin-project-lite v0.1.5 [INFO] [stderr] Compiling bit-vec v0.6.2 [INFO] [stderr] Compiling interval-tree v0.2.0 (https://github.com/zaeleus/interval-tree.git?tag=v0.2.0#fd15a404) [INFO] [stderr] Compiling time v0.1.43 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling flate2 v1.0.14 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling noodles-sam v0.1.0 (https://github.com/zaeleus/noodles.git?rev=27f8c25b937ebb50d5cd44f730385f33d69eb4b3#27f8c25b) [INFO] [stderr] Compiling clap v2.33.1 [INFO] [stderr] Compiling chrono v0.4.11 [INFO] [stderr] Compiling tokio v0.2.21 [INFO] [stderr] Compiling noodles-bgzf v0.1.0 (https://github.com/zaeleus/noodles.git?rev=27f8c25b937ebb50d5cd44f730385f33d69eb4b3#27f8c25b) [INFO] [stderr] Compiling quote v1.0.6 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling noodles v0.1.0 (https://github.com/zaeleus/noodles.git?rev=27f8c25b937ebb50d5cd44f730385f33d69eb4b3#27f8c25b) [INFO] [stderr] Compiling noodles-bam v0.1.0 (https://github.com/zaeleus/noodles.git?rev=27f8c25b937ebb50d5cd44f730385f33d69eb4b3#27f8c25b) [INFO] [stderr] Compiling noodles-gff v0.1.0 (https://github.com/zaeleus/noodles.git?rev=27f8c25b937ebb50d5cd44f730385f33d69eb4b3#27f8c25b) [INFO] [stderr] Compiling regex v1.3.7 [INFO] [stderr] Compiling git-testament-derive v0.1.10 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling git-testament v0.1.9 [INFO] [stderr] Compiling noodles-squab v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 09s [INFO] running `"docker" "inspect" "efa73470eb787b16df7dffba64412219693b4f9f4e114d879a2f6f4577d5d744"` [INFO] running `"docker" "rm" "-f" "efa73470eb787b16df7dffba64412219693b4f9f4e114d879a2f6f4577d5d744"` [INFO] [stdout] efa73470eb787b16df7dffba64412219693b4f9f4e114d879a2f6f4577d5d744 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen" "--no-run"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 47af123203a7633e85dab93755f293ec4863e4518659edce0f2f48b96fe577bf [INFO] running `"docker" "start" "-a" "47af123203a7633e85dab93755f293ec4863e4518659edce0f2f48b96fe577bf"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling noodles-squab v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.98s [INFO] running `"docker" "inspect" "47af123203a7633e85dab93755f293ec4863e4518659edce0f2f48b96fe577bf"` [INFO] running `"docker" "rm" "-f" "47af123203a7633e85dab93755f293ec4863e4518659edce0f2f48b96fe577bf"` [INFO] [stdout] 47af123203a7633e85dab93755f293ec4863e4518659edce0f2f48b96fe577bf [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] a17d8d30827d13319cd922bd0879db6f73866faa1da6a845f1856e48135409b6 [INFO] running `"docker" "start" "-a" "a17d8d30827d13319cd922bd0879db6f73866faa1da6a845f1856e48135409b6"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.10s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/noodles_squab-529b1db73c85d3ab [INFO] [stdout] [INFO] [stdout] running 23 tests [INFO] [stdout] test normalization::method::tests::test_from_str ... ok [INFO] [stdout] test normalization::fpkm::tests::test_calculate_fpkms_with_missing_feature ... ok [INFO] [stdout] test normalization::fpkm::tests::test_calculate_fpkms ... ok [INFO] [stdout] test feature::tests::test_strand ... ok [INFO] [stdout] test feature::tests::test_start ... ok [INFO] [stdout] test count::tests::test_get_reference ... ok [INFO] [stdout] test normalization::tests::test_merge_features ... ok [INFO] [stdout] test normalization::tpm::tests::test_calculate_tpms ... ok [INFO] [stdout] test normalization::tpm::tests::test_calculate_tpms_with_missing_feature ... ok [INFO] [stdout] test normalization::writer::tests::test_write_values ... ok [INFO] [stdout] test record_pairs::pair_position::tests::test_mate ... ok [INFO] [stdout] test feature::tests::test_len ... ok [INFO] [stdout] test record_pairs::pair_position::tests::test_try_from_flag ... ok [INFO] [stdout] test count::writer::tests::test_write_counts ... ok [INFO] [stdout] test normalization::tests::test_sum_nonoverlapping_feature_lengths ... ok [INFO] [stdout] test count::writer::tests::test_write_stats ... ok [INFO] [stdout] test count::reader::tests::test_read_counts ... ok [INFO] [stdout] test tests::test_new ... ok [INFO] [stdout] test tests::test_next ... ok [INFO] [stdout] test feature::tests::test_end ... ok [INFO] [stdout] test feature::tests::test_is_empty ... ok [INFO] [stdout] test feature::tests::test_reference_name ... ok [INFO] [stdout] test count::context::tests::test_add ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 23 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/noodles_squab-30ae93eb9e793d66 [INFO] [stderr] Doc-tests noodles-squab [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "a17d8d30827d13319cd922bd0879db6f73866faa1da6a845f1856e48135409b6"` [INFO] running `"docker" "rm" "-f" "a17d8d30827d13319cd922bd0879db6f73866faa1da6a845f1856e48135409b6"` [INFO] [stdout] a17d8d30827d13319cd922bd0879db6f73866faa1da6a845f1856e48135409b6