[INFO] updating cached repository https://github.com/stjude/fqlib [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] [stderr] From https://github.com/stjude/fqlib [INFO] [stderr] dd275a2..68e8d4b master -> master [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 68e8d4bc2ea5da1e22c563b819aad34ddeb1120d [INFO] testing stjude/fqlib against 1.44.0 for beta-1.45-1 [INFO] running `"git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstjude%2Ffqlib" "/workspace/builds/worker-1/source"` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/stjude/fqlib on toolchain 1.44.0 [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/stjude/fqlib [INFO] finished tweaking git repo https://github.com/stjude/fqlib [INFO] tweaked toml for git repo https://github.com/stjude/fqlib written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/stjude/fqlib already has a lockfile, it will not be regenerated [INFO] running `"/workspace/cargo-home/bin/cargo" "+1.44.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "build" "--frozen"` [INFO] [stdout] 33895d99efb40d143833fe88a10dba1a26be461506518eead5603742a368438e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "33895d99efb40d143833fe88a10dba1a26be461506518eead5603742a368438e"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling syn v1.0.30 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling noodles-bgzf v0.1.0 (https://github.com/zaeleus/noodles.git?rev=589224e25a22cb2a09d5c4955e86d098ed63439a#589224e2) [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling noodles-bam v0.1.0 (https://github.com/zaeleus/noodles.git?rev=589224e25a22cb2a09d5c4955e86d098ed63439a#589224e2) [INFO] [stderr] Compiling bbloom v0.1.0 (https://github.com/zaeleus/bbloom.git?tag=v0.1.0#2c9f6163) [INFO] [stderr] Compiling noodles-fastq v0.1.0 (https://github.com/zaeleus/noodles.git?rev=589224e25a22cb2a09d5c4955e86d098ed63439a#589224e2) [INFO] [stderr] Compiling git-testament-derive v0.1.10 [INFO] [stderr] Compiling git-testament v0.1.9 [INFO] [stderr] Compiling fqlib v0.3.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 30.18s [INFO] running `"docker" "inspect" "33895d99efb40d143833fe88a10dba1a26be461506518eead5603742a368438e"` [INFO] running `"docker" "rm" "-f" "33895d99efb40d143833fe88a10dba1a26be461506518eead5603742a368438e"` [INFO] [stdout] 33895d99efb40d143833fe88a10dba1a26be461506518eead5603742a368438e [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen" "--no-run"` [INFO] [stdout] 44deb9f3655a03d4bf6b4ba560df8fd190015bc6c8649c3f273932e31f650809 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `"docker" "start" "-a" "44deb9f3655a03d4bf6b4ba560df8fd190015bc6c8649c3f273932e31f650809"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Compiling fqlib v0.3.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.80s [INFO] running `"docker" "inspect" "44deb9f3655a03d4bf6b4ba560df8fd190015bc6c8649c3f273932e31f650809"` [INFO] running `"docker" "rm" "-f" "44deb9f3655a03d4bf6b4ba560df8fd190015bc6c8649c3f273932e31f650809"` [INFO] [stdout] 44deb9f3655a03d4bf6b4ba560df8fd190015bc6c8649c3f273932e31f650809 [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.44.0" "test" "--frozen"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 29fd6a5637621970c66db533704291b05d82a7e97a6dc43a04406270dac41619 [INFO] running `"docker" "start" "-a" "29fd6a5637621970c66db533704291b05d82a7e97a6dc43a04406270dac41619"` [INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 4.06s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/fqlib-6f34e2786c9ae92d [INFO] [stdout] [INFO] [stdout] running 45 tests [INFO] [stdout] test commands::filter::tests::test_name_id ... ok [INFO] [stdout] test commands::filter::tests::test_read_names ... ok [INFO] [stdout] test commands::lint::tests::test_build_error_message ... ok [INFO] [stdout] test validators::paired::names::tests::test_validate ... ok [INFO] [stdout] test validators::single::alphabet::tests::test_code ... ok [INFO] [stdout] test validators::single::complete::tests::test_level ... ok [INFO] [stdout] test validators::paired::names::tests::test_level ... ok [INFO] [stdout] test commands::lint::tests::test_build_error_message_with_no_col_no ... ok [INFO] [stdout] test validators::single::complete::tests::test_validate ... ok [INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_code ... ok [INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_level ... ok [INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_name ... ok [INFO] [stdout] test validators::single::consistent_seq_qual::tests::test_validate ... ok [INFO] [stdout] test validators::single::duplicate_name::tests::test_code ... ok [INFO] [stdout] test validators::single::duplicate_name::tests::test_is_empty ... ok [INFO] [stdout] test validators::single::duplicate_name::tests::test_level ... ok [INFO] [stdout] test validators::paired::names::tests::test_name ... ok [INFO] [stdout] test distributions::tests::test_sample ... ok [INFO] [stdout] test validators::single::alphabet::tests::test_new ... ok [INFO] [stdout] test validators::single::name::tests::test_code ... ok [INFO] [stdout] test validators::single::name::tests::test_name ... ok [INFO] [stdout] test generator::tests::test_next_record ... ok [INFO] [stdout] test validators::paired::names::tests::test_code ... ok [INFO] [stdout] test validators::single::complete::tests::test_code ... ok [INFO] [stdout] test validators::single::complete::tests::test_name ... ok [INFO] [stdout] test validators::single::plus_line::tests::test_validate ... ok [INFO] [stdout] test validators::single::quality_string::tests::test_level ... ok [INFO] [stdout] test validators::single::name::tests::test_validate ... ok [INFO] [stdout] test validators::single::plus_line::tests::test_level ... ok [INFO] [stdout] test validators::single::plus_line::tests::test_name ... ok [INFO] [stdout] test validators::single::quality_string::tests::test_code ... ok [INFO] [stdout] test validators::single::quality_string::tests::test_name ... ok [INFO] [stdout] test validators::single::quality_string::tests::test_validate ... ok [INFO] [stdout] test validators::tests::test_filter_validators ... ok [INFO] [stdout] test validators::tests::test_filter_single_read_validators_with_disabled_validators ... ok [INFO] [stdout] test validators::single::name::tests::test_level ... ok [INFO] [stdout] test validators::single::alphabet::tests::test_level ... ok [INFO] [stdout] test validators::single::alphabet::tests::test_validate ... ok [INFO] [stdout] test validators::single::plus_line::tests::test_code ... ok [INFO] [stdout] test validators::tests::test_filter_paired_read_validators ... ok [INFO] [stdout] test validators::single::alphabet::tests::test_name ... ok [INFO] [stdout] test validators::tests::test_filter_single_read_validators ... ok [INFO] [stdout] test commands::filter::tests::test_copy_filtered ... ok [INFO] [stdout] test validators::tests::test_filter_paired_read_validators_with_disabled_validators ... ok [INFO] [stdout] test validators::single::duplicate_name::tests::test_name ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 45 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/fq-bf9fb33a38ba4f08 [INFO] [stderr] Doc-tests fqlib [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test src/generator.rs - generator::Generator::next_record (line 123) ... ok [INFO] [stdout] test src/generator.rs - generator::Generator::from_rng (line 85) ... ok [INFO] [stdout] test src/record.rs - record::reset (line 13) ... ok [INFO] [stdout] test src/generator.rs - generator::Generator::from_seed (line 54) ... ok [INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator::is_empty (line 86) ... ok [INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator (line 20) ... ok [INFO] [stdout] test src/distributions.rs - distributions::Character (line 8) ... ok [INFO] [stdout] test src/generator.rs - generator::Generator::new (line 42) ... ok [INFO] [stdout] test src/generator.rs - generator::Generator::next_record_with_name (line 143) ... ok [INFO] [stdout] test src/validators/single/duplicate_name.rs - validators::single::duplicate_name::DuplicateNameValidator::insert (line 62) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "29fd6a5637621970c66db533704291b05d82a7e97a6dc43a04406270dac41619"` [INFO] running `"docker" "rm" "-f" "29fd6a5637621970c66db533704291b05d82a7e97a6dc43a04406270dac41619"` [INFO] [stdout] 29fd6a5637621970c66db533704291b05d82a7e97a6dc43a04406270dac41619